RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
RAF1-212ENST00000494557 PTPRGP23470 1445 aa12.58□□□□□ -0.4
RAF1-212ENST00000494557 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
RAF1-212ENST00000494557 ABCC5O15440 1437 aa12.58□□□□□ -0.4
RAF1-212ENST00000494557 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
RAF1-212ENST00000494557 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
RAF1-212ENST00000494557 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
RAF1-212ENST00000494557 E9PCH4 1651 aa12.56□□□□□ -0.4
RAF1-212ENST00000494557 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
RAF1-212ENST00000494557 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
RAF1-212ENST00000494557 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
RAF1-212ENST00000494557 PZPP20742 1482 aa12.55□□□□□ -0.4
RAF1-212ENST00000494557 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
RAF1-212ENST00000494557 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
RAF1-212ENST00000494557 IQGAP3Q86VI3 1631 aa12.53□□□□□ -0.4
RAF1-212ENST00000494557 ARHGEF12Q9NZN5 1544 aa12.53□□□□□ -0.4
RAF1-212ENST00000494557 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
RAF1-212ENST00000494557 ABCC2Q92887 1545 aa12.51□□□□□ -0.41
RAF1-212ENST00000494557 ATP10BO94823 1461 aa12.5□□□□□ -0.41
RAF1-212ENST00000494557 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
RAF1-212ENST00000494557 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
RAF1-212ENST00000494557 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
RAF1-212ENST00000494557 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
RAF1-212ENST00000494557 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
RAF1-212ENST00000494557 NCOA1Q15788 1441 aa12.48□□□□□ -0.41
RAF1-212ENST00000494557 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
RAF1-212ENST00000494557 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
RAF1-212ENST00000494557 KDM5CP41229 1560 aa12.48□□□□□ -0.41
RAF1-212ENST00000494557 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
RAF1-212ENST00000494557 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
RAF1-212ENST00000494557 ANKRD30BQ9BXX2 1392 aa12.46□□□□□ -0.42
RAF1-212ENST00000494557 ATP10AO60312 1499 aa12.46□□□□□ -0.42
RAF1-212ENST00000494557 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
RAF1-212ENST00000494557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAF1-212ENST00000494557 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
RAF1-212ENST00000494557 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
RAF1-212ENST00000494557 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
RAF1-212ENST00000494557 WDR7Q9Y4E6 1490 aa12.43□□□□□ -0.42
RAF1-212ENST00000494557 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
RAF1-212ENST00000494557 INO80Q9ULG1 1556 aaPredicted RBP12.41□□□□□ -0.42
RAF1-212ENST00000494557 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
RAF1-212ENST00000494557 CEP152O94986 1710 aa12.41□□□□□ -0.42
RAF1-212ENST00000494557 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
RAF1-212ENST00000494557 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
RAF1-212ENST00000494557 ABCC1P33527 1531 aa12.41□□□□□ -0.42
RAF1-212ENST00000494557 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
RAF1-212ENST00000494557 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.43
RAF1-212ENST00000494557 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
RAF1-212ENST00000494557 MIER1Q8N108 512 aa12.38□□□□□ -0.43
RAF1-212ENST00000494557 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
RAF1-212ENST00000494557 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
RAF1-212ENST00000494557 RALGAPBQ86X10 1494 aa12.36□□□□□ -0.43
RAF1-212ENST00000494557 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
RAF1-212ENST00000494557 SPHKAPQ2M3C7 1700 aa12.36□□□□□ -0.43
RAF1-212ENST00000494557 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
RAF1-212ENST00000494557 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
RAF1-212ENST00000494557 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
RAF1-212ENST00000494557 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
RAF1-212ENST00000494557 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
RAF1-212ENST00000494557 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
RAF1-212ENST00000494557 MROH1Q8NDA8 1641 aa12.32□□□□□ -0.44
RAF1-212ENST00000494557 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
RAF1-212ENST00000494557 CCER2I3L3R5 266 aa12.32□□□□□ -0.44
RAF1-212ENST00000494557 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
RAF1-212ENST00000494557 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
RAF1-212ENST00000494557 TET3O43151 1660 aa12.31□□□□□ -0.44
RAF1-212ENST00000494557 ERBINQ96RT1 1412 aa12.31□□□□□ -0.44
RAF1-212ENST00000494557 MYT1Q01538 1121 aa12.3□□□□□ -0.44
RAF1-212ENST00000494557 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
RAF1-212ENST00000494557 ZMYM4Q5VZL5 1548 aa12.3□□□□□ -0.44
RAF1-212ENST00000494557 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
RAF1-212ENST00000494557 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
RAF1-212ENST00000494557 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
RAF1-212ENST00000494557 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
RAF1-212ENST00000494557 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
RAF1-212ENST00000494557 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
RAF1-212ENST00000494557 LMTK2Q8IWU2 1503 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 CNTLNQ9NXG0 1405 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 ANKRD50Q9ULJ7 1429 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 TRPM2O94759 1503 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 ANKRD30AQ9BXX3 1397 aa12.26□□□□□ -0.45
RAF1-212ENST00000494557 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
RAF1-212ENST00000494557 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
RAF1-212ENST00000494557 PLCH2O75038 1416 aa12.24□□□□□ -0.45
RAF1-212ENST00000494557 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
RAF1-212ENST00000494557 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
RAF1-212ENST00000494557 ZC3H13Q5T200 1668 aaKnown RBP12.24□□□□□ -0.45
RAF1-212ENST00000494557 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
RAF1-212ENST00000494557 PLA2R1Q13018 1463 aa12.22□□□□□ -0.45
RAF1-212ENST00000494557 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
RAF1-212ENST00000494557 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.46
RAF1-212ENST00000494557 MYOM1P52179 1685 aa12.2□□□□□ -0.46
RAF1-212ENST00000494557 PTPRTO14522 1441 aa12.19□□□□□ -0.46
RAF1-212ENST00000494557 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
RAF1-212ENST00000494557 INSRP06213 1382 aa12.18□□□□□ -0.46
RAF1-212ENST00000494557 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
RAF1-212ENST00000494557 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
RAF1-212ENST00000494557 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
RAF1-212ENST00000494557 NRXN1Q9ULB1 1477 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms