RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	CHIC2	Q9UKJ5	165 aa		32.88	■■■□□ 2.85
ARHGAP4-223	ENST00000494397	RRP7BP	Q9NSQ0	103 aa		32.86	■■■□□ 2.85
ARHGAP4-223	ENST00000494397	UHRF1BP1L	A0JNW5	1464 aa		32.83	■■■□□ 2.85
ARHGAP4-223	ENST00000494397	ACIN1	Q9UKV3	1341 aa	Known RBP	32.8	■■■□□ 2.84
ARHGAP4-223	ENST00000494397	CDC42BPA	Q5VT25	1732 aa		32.78	■■■□□ 2.84
ARHGAP4-223	ENST00000494397	TIMELESS	Q9UNS1	1208 aa		32.77	■■■□□ 2.84
ARHGAP4-223	ENST00000494397	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.73	■■■□□ 2.83
ARHGAP4-223	ENST00000494397	KDM5B	Q9UGL1	1544 aa		32.71	■■■□□ 2.83
ARHGAP4-223	ENST00000494397	ADGRL2	O95490	1459 aa		32.7	■■■□□ 2.83
ARHGAP4-223	ENST00000494397	DIEXF	Q68CQ4	756 aa	Known RBP	32.7	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	KDM6B	O15054	1643 aa		32.69	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	SIN3A	Q96ST3	1273 aa		32.68	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	CROCC2	H7BZ55	1655 aa		32.68	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	SHANK2	Q9UPX8	1470 aa		32.66	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	PREX2	Q70Z35	1606 aa		32.65	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	NCOA1	Q15788	1441 aa		32.65	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	ADGB	Q8N7X0	1667 aa		32.64	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.64	■■■□□ 2.82
ARHGAP4-223	ENST00000494397	NEUROD1	Q13562	356 aa		32.63	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	OSCAR	Q8IYS5	282 aa		32.6	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	ANKRD30A	Q9BXX3	1397 aa		32.6	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	ARHGEF5	Q12774	1597 aa		32.6	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	TRIM52	Q96A61	297 aa		32.6	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	TTC37	Q6PGP7	1564 aa		32.58	■■■□□ 2.81
ARHGAP4-223	ENST00000494397	DENND4B	O75064	1496 aa	Predicted RBP	32.55	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	MBD5	Q9P267	1494 aa		32.55	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	CDC42BPB	Q9Y5S2	1711 aa		32.55	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	SAMD9L	Q8IVG5	1584 aa		32.54	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	C9orf84	Q5VXU9	1444 aa		32.54	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	RSPH4A	Q5TD94	716 aa		32.53	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	MPHOSPH9	Q99550	1183 aa		32.53	■■■□□ 2.8
ARHGAP4-223	ENST00000494397	TSPY4	P0CV99	314 aa		32.5	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	TSPY10	P0CW01	314 aa		32.5	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	ARHGAP5	Q13017	1502 aa		32.5	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	CCDC141	Q6ZP82	1450 aa		32.49	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	TONSL	Q96HA7	1378 aa		32.48	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	PLEKHH2	Q8IVE3	1493 aa		32.47	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	MYO5C	Q9NQX4	1742 aa		32.47	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.45	■■■□□ 2.79
ARHGAP4-223	ENST00000494397	PPP1R15A	O75807	674 aa	Predicted RBP	32.45	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	KCNH8	Q96L42	1107 aa		32.45	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	PLCH2	O75038	1416 aa		32.44	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	KIAA1107	Q9UPP5	1409 aa		32.44	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	ANKRD50	Q9ULJ7	1429 aa		32.44	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	SYCP2	Q9BX26	1530 aa		32.39	■■■□□ 2.78
ARHGAP4-223	ENST00000494397	WDR7	Q9Y4E6	1490 aa		32.38	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	PZP	P20742	1482 aa		32.36	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	MAST1	Q9Y2H9	1570 aa		32.36	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	ARAP3	Q8WWN8	1544 aa		32.35	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	KIF15	Q9NS87	1388 aa		32.35	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.35	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	EFCAB2	Q5VUJ9	269 aa		32.33	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	ANKRD30B	Q9BXX2	1392 aa		32.33	■■■□□ 2.77
ARHGAP4-223	ENST00000494397	KDM5D	Q9BY66	1539 aa		32.26	■■■□□ 2.76
ARHGAP4-223	ENST00000494397	ABCC1	P33527	1531 aa		32.25	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	ARHGEF12	Q9NZN5	1544 aa		32.25	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	FOXD1	Q16676	465 aa		32.24	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	RPRD2	Q5VT52	1461 aa	Known RBP	32.24	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	ASXL2	Q76L83	1435 aa		32.23	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	PLXNC1	O60486	1568 aa		32.22	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	ABCA9	Q8IUA7	1624 aa		32.21	■■■□□ 2.75
ARHGAP4-223	ENST00000494397	NUP155	O75694	1391 aa		32.19	■■■□□ 2.74
ARHGAP4-223	ENST00000494397	NPM1	P06748	294 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
ARHGAP4-223	ENST00000494397	PKD2	Q13563	968 aa		32.13	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	DUOX2	Q9NRD8	1548 aa		32.11	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	TRAPPC8	Q9Y2L5	1435 aa		32.1	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	FANCA	O15360	1455 aa		32.09	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	TEX14	Q8IWB6	1497 aa		32.09	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	MIER1	Q8N108	512 aa		32.09	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	L3MBTL2	Q969R5	705 aa		32.08	■■■□□ 2.73
ARHGAP4-223	ENST00000494397	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.06	■■■□□ 2.72
ARHGAP4-223	ENST00000494397	ERBIN	Q96RT1	1412 aa		32.06	■■■□□ 2.72
ARHGAP4-223	ENST00000494397	UNC13B	O14795	1591 aa		32.06	■■■□□ 2.72
ARHGAP4-223	ENST00000494397	FAM135A	Q9P2D6	1515 aa		32.03	■■■□□ 2.72
ARHGAP4-223	ENST00000494397	SPAG9	O60271	1321 aa	Known RBP	32	■■■□□ 2.71
ARHGAP4-223	ENST00000494397	ZFYVE16	Q7Z3T8	1539 aa		31.98	■■■□□ 2.71
ARHGAP4-223	ENST00000494397	ADGRL1	O94910	1474 aa		31.97	■■■□□ 2.71
ARHGAP4-223	ENST00000494397	MAGI2	Q86UL8	1455 aa		31.96	■■■□□ 2.71
ARHGAP4-223	ENST00000494397	AFAP1	Q8N556	730 aa		31.95	■■■□□ 2.71
ARHGAP4-223	ENST00000494397	SCAPER	Q9BY12	1400 aa		31.93	■■■□□ 2.7
ARHGAP4-223	ENST00000494397	IQGAP3	Q86VI3	1631 aa		31.92	■■■□□ 2.7
ARHGAP4-223	ENST00000494397	INO80	Q9ULG1	1556 aa	Predicted RBP	31.9	■■■□□ 2.7
ARHGAP4-223	ENST00000494397	CD109	Q6YHK3	1445 aa		31.88	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	ATP7A	Q04656	1500 aa		31.88	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	CFAP74	Q9C0B2	1584 aa		31.86	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.85	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	NBPF8	Q3BBV2	869 aa		31.84	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.83	■■■□□ 2.69
ARHGAP4-223	ENST00000494397	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	ZNF518A	Q6AHZ1	1483 aa		31.8	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	HSPA5	P11021	654 aa	Known RBP	31.79	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	DDX10	Q13206	875 aa	Known RBP	31.78	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	RIMBP3C	A6NJZ7	1639 aa		31.76	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	RIMBP3B	A6NNM3	1639 aa		31.76	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	RIMBP3	Q9UFD9	1639 aa		31.76	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	UHRF1BP1	Q6BDS2	1440 aa		31.76	■■■□□ 2.68
ARHGAP4-223	ENST00000494397	ATP10A	O60312	1499 aa		31.76	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	CCDC144A	A2RUR9	1427 aa		31.76	■■■□□ 2.67
ARHGAP4-223	ENST00000494397	CENPB	P07199	599 aa	Predicted RBP	31.74	■■■□□ 2.67

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