RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
COL25A1-204ENST00000494183 RGS3P49796 1198 aa15.17■□□□□ 0.02
COL25A1-204ENST00000494183 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
COL25A1-204ENST00000494183 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
COL25A1-204ENST00000494183 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
COL25A1-204ENST00000494183 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
COL25A1-204ENST00000494183 NUTM2DQ5VT03 806 aaPredicted RBP15.15■□□□□ 0.02
COL25A1-204ENST00000494183 HDGFL2Q7Z4V5 671 aaPredicted RBP15.13■□□□□ 0.01
COL25A1-204ENST00000494183 CCDC18Q5T9S5 1454 aa15.13■□□□□ 0.01
COL25A1-204ENST00000494183 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
COL25A1-204ENST00000494183 PTPRGP23470 1445 aa15.13■□□□□ 0.01
COL25A1-204ENST00000494183 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
COL25A1-204ENST00000494183 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
COL25A1-204ENST00000494183 BECN1Q14457 450 aa15.12■□□□□ 0.01
COL25A1-204ENST00000494183 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
COL25A1-204ENST00000494183 IGF1RP08069 1367 aa15.1■□□□□ 0.01
COL25A1-204ENST00000494183 U2AF1L5P0DN76 240 aaPredicted RBP15.1■□□□□ 0.01
COL25A1-204ENST00000494183 U2AF1Q01081 240 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL25A1-204ENST00000494183 KTN1Q86UP2 1357 aaKnown RBP15.09■□□□□ 0.01
COL25A1-204ENST00000494183 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
COL25A1-204ENST00000494183 MS4A1P11836 297 aa15.08■□□□□ 0
COL25A1-204ENST00000494183 DDRGK1Q96HY6 314 aa15.07■□□□□ 0
COL25A1-204ENST00000494183 NPHP1O15259 732 aa15.06■□□□□ 0
COL25A1-204ENST00000494183 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
COL25A1-204ENST00000494183 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ 0
COL25A1-204ENST00000494183 RTF1Q92541 710 aaKnown RBP15.05■□□□□ 0
COL25A1-204ENST00000494183 OS9Q13438 667 aaPredicted RBP15.05■□□□□ -0
COL25A1-204ENST00000494183 NUTM2FA1L443 756 aa15.05■□□□□ -0
COL25A1-204ENST00000494183 CASC1Q6TDU7 716 aa15.05■□□□□ -0
COL25A1-204ENST00000494183 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
COL25A1-204ENST00000494183 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
COL25A1-204ENST00000494183 GAPVD1Q14C86 1478 aa15.04■□□□□ -0
COL25A1-204ENST00000494183 EID1Q9Y6B2 187 aa15.04■□□□□ -0
COL25A1-204ENST00000494183 RALBP1Q15311 655 aa15.03■□□□□ -0
COL25A1-204ENST00000494183 ST20-MTHFSA0A0A6YYL1 179 aa15.02□□□□□ -0.01
COL25A1-204ENST00000494183 EIF5BO60841 1220 aaKnown RBP15.02□□□□□ -0.01
COL25A1-204ENST00000494183 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
COL25A1-204ENST00000494183 NCAPD3P42695 1498 aa15□□□□□ -0.01
COL25A1-204ENST00000494183 CSB-PGBD3P0DP91 1061 aa15□□□□□ -0.01
COL25A1-204ENST00000494183 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
COL25A1-204ENST00000494183 GOLGA6L22H0YM25 854 aa14.99□□□□□ -0.01
COL25A1-204ENST00000494183 NGDNQ8NEJ9 315 aaKnown RBP14.99□□□□□ -0.01
COL25A1-204ENST00000494183 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL25A1-204ENST00000494183 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
COL25A1-204ENST00000494183 ZNF644Q9H582 1327 aaPredicted RBP14.97□□□□□ -0.01
COL25A1-204ENST00000494183 TPRNQ4KMQ1 711 aa14.97□□□□□ -0.01
COL25A1-204ENST00000494183 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
COL25A1-204ENST00000494183 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.01
COL25A1-204ENST00000494183 NLRP13Q86W25 1043 aa14.96□□□□□ -0.02
COL25A1-204ENST00000494183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL25A1-204ENST00000494183 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
COL25A1-204ENST00000494183 KCNJ4P48050 445 aa14.95□□□□□ -0.02
COL25A1-204ENST00000494183 APBB1O00213 710 aa14.94□□□□□ -0.02
COL25A1-204ENST00000494183 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
COL25A1-204ENST00000494183 IPO8O15397 1037 aaKnown RBP14.94□□□□□ -0.02
COL25A1-204ENST00000494183 FGD1P98174 961 aa14.93□□□□□ -0.02
COL25A1-204ENST00000494183 VGFO15240 615 aaPredicted RBP14.93□□□□□ -0.02
COL25A1-204ENST00000494183 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
COL25A1-204ENST00000494183 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
COL25A1-204ENST00000494183 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
COL25A1-204ENST00000494183 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
COL25A1-204ENST00000494183 PANK3Q9H999 370 aa14.91□□□□□ -0.02
COL25A1-204ENST00000494183 FAM69CQ0P6D2 419 aa14.91□□□□□ -0.02
COL25A1-204ENST00000494183 LTV1Q96GA3 475 aaPredicted RBP14.91□□□□□ -0.02
COL25A1-204ENST00000494183 AMPHP49418 695 aa14.9□□□□□ -0.02
COL25A1-204ENST00000494183 ANP32EQ9BTT0 268 aa14.89□□□□□ -0.03
COL25A1-204ENST00000494183 CLUAP1Q96AJ1 413 aa14.88□□□□□ -0.03
COL25A1-204ENST00000494183 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
COL25A1-204ENST00000494183 NAP1L2Q9ULW6 460 aaPredicted RBP14.87□□□□□ -0.03
COL25A1-204ENST00000494183 ZRSR1Q15695 479 aaKnown RBP14.87□□□□□ -0.03
COL25A1-204ENST00000494183 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
COL25A1-204ENST00000494183 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
COL25A1-204ENST00000494183 MINK1Q8N4C8 1332 aaPredicted RBP14.86□□□□□ -0.03
COL25A1-204ENST00000494183 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
COL25A1-204ENST00000494183 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
COL25A1-204ENST00000494183 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
COL25A1-204ENST00000494183 AFAP1Q8N556 730 aa14.85□□□□□ -0.03
COL25A1-204ENST00000494183 TRIM44Q96DX7 344 aaPredicted RBP14.84□□□□□ -0.03
COL25A1-204ENST00000494183 RRP7AQ9Y3A4 280 aaKnown RBP14.84□□□□□ -0.03
COL25A1-204ENST00000494183 NESP48681 1621 aa14.83□□□□□ -0.04
COL25A1-204ENST00000494183 PHLDB1Q86UU1 1377 aa14.83□□□□□ -0.04
COL25A1-204ENST00000494183 KIF15Q9NS87 1388 aa14.82□□□□□ -0.04
COL25A1-204ENST00000494183 FGD6Q6ZV73 1430 aa14.82□□□□□ -0.04
COL25A1-204ENST00000494183 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
COL25A1-204ENST00000494183 USP47Q96K76 1375 aa14.82□□□□□ -0.04
COL25A1-204ENST00000494183 CDK11BP21127 795 aaKnown RBP14.82□□□□□ -0.04
COL25A1-204ENST00000494183 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
COL25A1-204ENST00000494183 RWDD1Q9H446 243 aaPredicted RBP14.81□□□□□ -0.04
COL25A1-204ENST00000494183 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
COL25A1-204ENST00000494183 SLC4A10Q6U841 1118 aa14.8□□□□□ -0.04
COL25A1-204ENST00000494183 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
COL25A1-204ENST00000494183 CFTRP13569 1480 aa14.8□□□□□ -0.04
COL25A1-204ENST00000494183 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
COL25A1-204ENST00000494183 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
COL25A1-204ENST00000494183 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
COL25A1-204ENST00000494183 PDE3BQ13370 1112 aa14.79□□□□□ -0.04
COL25A1-204ENST00000494183 SPRYD3Q8NCJ5 442 aa14.79□□□□□ -0.04
COL25A1-204ENST00000494183 COG3Q96JB2 828 aa14.78□□□□□ -0.04
COL25A1-204ENST00000494183 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
COL25A1-204ENST00000494183 HSCBQ8IWL3 235 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms