RNA–Protein interactions for RNA: ENST00000493502.3

SSPO-210, Transcript of SCO-spondin, humanhuman

TSL 5

Gene SSPO, Length 646 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-210ENST00000493502 SCAPERQ9BY12 1400 aa23.61■■□□□ 1.37
SSPO-210ENST00000493502 MLECQ14165 292 aa23.61■■□□□ 1.37
SSPO-210ENST00000493502 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
SSPO-210ENST00000493502 PLCH2O75038 1416 aa23.6■■□□□ 1.37
SSPO-210ENST00000493502 EEA1Q15075 1411 aa23.59■■□□□ 1.37
SSPO-210ENST00000493502 ATP10AO60312 1499 aa23.57■■□□□ 1.36
SSPO-210ENST00000493502 C9orf84Q5VXU9 1444 aa23.56■■□□□ 1.36
SSPO-210ENST00000493502 STRCQ7RTU9 1775 aa23.53■■□□□ 1.36
SSPO-210ENST00000493502 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
SSPO-210ENST00000493502 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
SSPO-210ENST00000493502 KDM5CP41229 1560 aa23.48■■□□□ 1.35
SSPO-210ENST00000493502 KIF14Q15058 1648 aa23.48■■□□□ 1.35
SSPO-210ENST00000493502 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
SSPO-210ENST00000493502 EFCAB2Q5VUJ9 269 aa23.45■■□□□ 1.34
SSPO-210ENST00000493502 ILDR2Q71H61 639 aa23.44■■□□□ 1.34
SSPO-210ENST00000493502 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
SSPO-210ENST00000493502 UHRF1BP1Q6BDS2 1440 aa23.42■■□□□ 1.34
SSPO-210ENST00000493502 REREQ9P2R6 1566 aa23.42■■□□□ 1.34
SSPO-210ENST00000493502 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
SSPO-210ENST00000493502 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
SSPO-210ENST00000493502 ABCA6Q8N139 1617 aa23.4■■□□□ 1.34
SSPO-210ENST00000493502 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.34
SSPO-210ENST00000493502 C3P01024 1663 aa23.39■■□□□ 1.34
SSPO-210ENST00000493502 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.33
SSPO-210ENST00000493502 SETD1BQ9UPS6 1966 aaKnown RBP23.39■■□□□ 1.33
SSPO-210ENST00000493502 AFAP1Q8N556 730 aa23.38■■□□□ 1.33
SSPO-210ENST00000493502 ARHGAP35Q9NRY4 1499 aa23.37■■□□□ 1.33
SSPO-210ENST00000493502 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
SSPO-210ENST00000493502 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
SSPO-210ENST00000493502 PTPRTO14522 1441 aa23.35■■□□□ 1.33
SSPO-210ENST00000493502 SOCS7O14512 581 aa23.34■■□□□ 1.33
SSPO-210ENST00000493502 MLH3Q9UHC1 1453 aa23.34■■□□□ 1.33
SSPO-210ENST00000493502 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.33
SSPO-210ENST00000493502 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
SSPO-210ENST00000493502 CDK11AQ9UQ88 783 aaPredicted RBP23.33■■□□□ 1.33
SSPO-210ENST00000493502 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.32
SSPO-210ENST00000493502 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
SSPO-210ENST00000493502 AGLP35573 1532 aa23.32■■□□□ 1.32
SSPO-210ENST00000493502 ABCC1P33527 1531 aa23.3■■□□□ 1.32
SSPO-210ENST00000493502 CLIP1P30622 1438 aa23.29■■□□□ 1.32
SSPO-210ENST00000493502 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
SSPO-210ENST00000493502 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
SSPO-210ENST00000493502 ITSN2Q9NZM3 1697 aa23.27■■□□□ 1.32
SSPO-210ENST00000493502 NCOA1Q15788 1441 aa23.26■■□□□ 1.31
SSPO-210ENST00000493502 KIDINS220Q9ULH0 1771 aa23.25■■□□□ 1.31
SSPO-210ENST00000493502 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
SSPO-210ENST00000493502 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
SSPO-210ENST00000493502 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
SSPO-210ENST00000493502 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
SSPO-210ENST00000493502 CNTLNQ9NXG0 1405 aa23.2■■□□□ 1.3
SSPO-210ENST00000493502 MROH2AA6NES4 1674 aa23.18■■□□□ 1.3
SSPO-210ENST00000493502 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
SSPO-210ENST00000493502 ESF1Q9H501 851 aaKnown RBP23.17■■□□□ 1.3
SSPO-210ENST00000493502 CAMSAP1Q5T5Y3 1602 aa23.17■■□□□ 1.3
SSPO-210ENST00000493502 NPATQ14207 1427 aa23.16■■□□□ 1.3
SSPO-210ENST00000493502 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.3
SSPO-210ENST00000493502 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
SSPO-210ENST00000493502 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
SSPO-210ENST00000493502 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
SSPO-210ENST00000493502 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
SSPO-210ENST00000493502 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
SSPO-210ENST00000493502 ZMYM3Q14202 1370 aa23.08■■□□□ 1.29
SSPO-210ENST00000493502 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
SSPO-210ENST00000493502 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
SSPO-210ENST00000493502 ZNF335Q9H4Z2 1342 aaPredicted RBP23.07■■□□□ 1.28
SSPO-210ENST00000493502 CLTCQ00610 1675 aaKnown RBP23.06■■□□□ 1.28
SSPO-210ENST00000493502 NCKAP5LQ9HCH0 1330 aa23.06■■□□□ 1.28
SSPO-210ENST00000493502 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
SSPO-210ENST00000493502 INO80Q9ULG1 1556 aaPredicted RBP23.04■■□□□ 1.28
SSPO-210ENST00000493502 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
SSPO-210ENST00000493502 ATP7AQ04656 1500 aa23.03■■□□□ 1.28
SSPO-210ENST00000493502 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
SSPO-210ENST00000493502 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
SSPO-210ENST00000493502 PTPRKQ15262 1439 aa23.01■■□□□ 1.27
SSPO-210ENST00000493502 FYCO1Q9BQS8 1478 aa23.01■■□□□ 1.27
SSPO-210ENST00000493502 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
SSPO-210ENST00000493502 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
SSPO-210ENST00000493502 A2MP01023 1474 aa22.98■■□□□ 1.27
SSPO-210ENST00000493502 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
SSPO-210ENST00000493502 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
SSPO-210ENST00000493502 PKD2Q13563 968 aa22.97■■□□□ 1.27
SSPO-210ENST00000493502 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
SSPO-210ENST00000493502 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
SSPO-210ENST00000493502 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
SSPO-210ENST00000493502 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
SSPO-210ENST00000493502 A2ML1A8K2U0 1454 aa22.89■■□□□ 1.25
SSPO-210ENST00000493502 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
SSPO-210ENST00000493502 GGT6Q6P531 493 aa22.88■■□□□ 1.25
SSPO-210ENST00000493502 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
SSPO-210ENST00000493502 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
SSPO-210ENST00000493502 NEURL4Q96JN8 1562 aa22.87■■□□□ 1.25
SSPO-210ENST00000493502 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
SSPO-210ENST00000493502 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
SSPO-210ENST00000493502 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
SSPO-210ENST00000493502 MBD5Q9P267 1494 aa22.82■■□□□ 1.24
SSPO-210ENST00000493502 TIAM1Q13009 1591 aa22.81■■□□□ 1.24
SSPO-210ENST00000493502 HSPA1LP34931 641 aa22.81■■□□□ 1.24
SSPO-210ENST00000493502 CPS1P31327 1500 aa22.81■■□□□ 1.24
SSPO-210ENST00000493502 ZNF644Q9H582 1327 aaPredicted RBP22.79■■□□□ 1.24
SSPO-210ENST00000493502 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms