RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
PTPN7-216ENST00000492977 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
PTPN7-216ENST00000492977 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
PTPN7-216ENST00000492977 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
PTPN7-216ENST00000492977 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
PTPN7-216ENST00000492977 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
PTPN7-216ENST00000492977 UHRF1BP1LA0JNW5 1464 aa20.58■□□□□ 0.89
PTPN7-216ENST00000492977 DAPK1P53355 1430 aa20.58■□□□□ 0.88
PTPN7-216ENST00000492977 GCC2Q8IWJ2 1684 aa20.57■□□□□ 0.88
PTPN7-216ENST00000492977 ROCK1Q13464 1354 aa20.57■□□□□ 0.88
PTPN7-216ENST00000492977 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
PTPN7-216ENST00000492977 ABCC5O15440 1437 aa20.56■□□□□ 0.88
PTPN7-216ENST00000492977 ZNF644Q9H582 1327 aaPredicted RBP20.55■□□□□ 0.88
PTPN7-216ENST00000492977 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
PTPN7-216ENST00000492977 CHIC2Q9UKJ5 165 aa20.55■□□□□ 0.88
PTPN7-216ENST00000492977 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
PTPN7-216ENST00000492977 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
PTPN7-216ENST00000492977 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
PTPN7-216ENST00000492977 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
PTPN7-216ENST00000492977 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
PTPN7-216ENST00000492977 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
PTPN7-216ENST00000492977 ZCCHC11Q5TAX3 1644 aaKnown RBP20.46■□□□□ 0.87
PTPN7-216ENST00000492977 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
PTPN7-216ENST00000492977 CROCC2H7BZ55 1655 aa20.44■□□□□ 0.86
PTPN7-216ENST00000492977 PREX2Q70Z35 1606 aa20.43■□□□□ 0.86
PTPN7-216ENST00000492977 ADGBQ8N7X0 1667 aa20.43■□□□□ 0.86
PTPN7-216ENST00000492977 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
PTPN7-216ENST00000492977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.86
PTPN7-216ENST00000492977 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
PTPN7-216ENST00000492977 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
PTPN7-216ENST00000492977 KDM6BO15054 1643 aa20.41■□□□□ 0.86
PTPN7-216ENST00000492977 SHANK2Q9UPX8 1470 aa20.4■□□□□ 0.86
PTPN7-216ENST00000492977 ARHGEF5Q12774 1597 aa20.39■□□□□ 0.86
PTPN7-216ENST00000492977 RSPH4AQ5TD94 716 aa20.38■□□□□ 0.85
PTPN7-216ENST00000492977 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
PTPN7-216ENST00000492977 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
PTPN7-216ENST00000492977 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
PTPN7-216ENST00000492977 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
PTPN7-216ENST00000492977 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
PTPN7-216ENST00000492977 SAMD9LQ8IVG5 1584 aa20.35■□□□□ 0.85
PTPN7-216ENST00000492977 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
PTPN7-216ENST00000492977 MBD5Q9P267 1494 aa20.35■□□□□ 0.85
PTPN7-216ENST00000492977 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
PTPN7-216ENST00000492977 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
PTPN7-216ENST00000492977 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
PTPN7-216ENST00000492977 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
PTPN7-216ENST00000492977 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.85
PTPN7-216ENST00000492977 C9orf84Q5VXU9 1444 aa20.33■□□□□ 0.85
PTPN7-216ENST00000492977 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.84
PTPN7-216ENST00000492977 PLEKHH2Q8IVE3 1493 aa20.32■□□□□ 0.84
PTPN7-216ENST00000492977 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPN7-216ENST00000492977 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
PTPN7-216ENST00000492977 PLCH2O75038 1416 aa20.31■□□□□ 0.84
PTPN7-216ENST00000492977 CCDC141Q6ZP82 1450 aa20.31■□□□□ 0.84
PTPN7-216ENST00000492977 KIAA1107Q9UPP5 1409 aa20.3■□□□□ 0.84
PTPN7-216ENST00000492977 DENND4BO75064 1496 aaPredicted RBP20.29■□□□□ 0.84
PTPN7-216ENST00000492977 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
PTPN7-216ENST00000492977 WDR7Q9Y4E6 1490 aa20.29■□□□□ 0.84
PTPN7-216ENST00000492977 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.83
PTPN7-216ENST00000492977 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
PTPN7-216ENST00000492977 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
PTPN7-216ENST00000492977 TONSLQ96HA7 1378 aa20.25■□□□□ 0.83
PTPN7-216ENST00000492977 SYCP2Q9BX26 1530 aa20.25■□□□□ 0.83
PTPN7-216ENST00000492977 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
PTPN7-216ENST00000492977 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
PTPN7-216ENST00000492977 KIF15Q9NS87 1388 aa20.22■□□□□ 0.83
PTPN7-216ENST00000492977 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPN7-216ENST00000492977 MSH5O43196 834 aa20.21■□□□□ 0.83
PTPN7-216ENST00000492977 ASXL2Q76L83 1435 aa20.2■□□□□ 0.82
PTPN7-216ENST00000492977 PZPP20742 1482 aa20.2■□□□□ 0.82
PTPN7-216ENST00000492977 ABCA9Q8IUA7 1624 aa20.19■□□□□ 0.82
PTPN7-216ENST00000492977 ANKRD30BQ9BXX2 1392 aa20.19■□□□□ 0.82
PTPN7-216ENST00000492977 ABCC1P33527 1531 aa20.17■□□□□ 0.82
PTPN7-216ENST00000492977 ARHGEF12Q9NZN5 1544 aa20.16■□□□□ 0.82
PTPN7-216ENST00000492977 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
PTPN7-216ENST00000492977 KDM5DQ9BY66 1539 aa20.15■□□□□ 0.82
PTPN7-216ENST00000492977 NUP155O75694 1391 aa20.12■□□□□ 0.81
PTPN7-216ENST00000492977 RPRD2Q5VT52 1461 aaKnown RBP20.11■□□□□ 0.81
PTPN7-216ENST00000492977 FANCAO15360 1455 aa20.1■□□□□ 0.81
PTPN7-216ENST00000492977 TRAPPC8Q9Y2L5 1435 aa20.09■□□□□ 0.81
PTPN7-216ENST00000492977 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
PTPN7-216ENST00000492977 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
PTPN7-216ENST00000492977 PKD2Q13563 968 aa20.08■□□□□ 0.8
PTPN7-216ENST00000492977 ZBTB22O15209 634 aa20.05■□□□□ 0.8
PTPN7-216ENST00000492977 ERBINQ96RT1 1412 aa20.05■□□□□ 0.8
PTPN7-216ENST00000492977 UNC13BO14795 1591 aa20.04■□□□□ 0.8
PTPN7-216ENST00000492977 SPAG9O60271 1321 aaKnown RBP20.04■□□□□ 0.8
PTPN7-216ENST00000492977 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
PTPN7-216ENST00000492977 ADGRL1O94910 1474 aa20.01■□□□□ 0.79
PTPN7-216ENST00000492977 FAM135AQ9P2D6 1515 aa20.01■□□□□ 0.79
PTPN7-216ENST00000492977 AFAP1Q8N556 730 aa20■□□□□ 0.79
PTPN7-216ENST00000492977 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
PTPN7-216ENST00000492977 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
PTPN7-216ENST00000492977 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
PTPN7-216ENST00000492977 CFAP74Q9C0B2 1584 aa19.99■□□□□ 0.79
PTPN7-216ENST00000492977 ZFYVE16Q7Z3T8 1539 aa19.99■□□□□ 0.79
PTPN7-216ENST00000492977 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
PTPN7-216ENST00000492977 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
PTPN7-216ENST00000492977 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
PTPN7-216ENST00000492977 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms