RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
SEC13-219ENST00000492602 RICTORQ6R327 1708 aa9.64□□□□□ -0.87
SEC13-219ENST00000492602 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
SEC13-219ENST00000492602 TOM1O60784 492 aa9.63□□□□□ -0.87
SEC13-219ENST00000492602 FAM9AQ8IZU1 332 aaPredicted RBP9.63□□□□□ -0.87
SEC13-219ENST00000492602 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
SEC13-219ENST00000492602 MAGI2Q86UL8 1455 aa9.62□□□□□ -0.87
SEC13-219ENST00000492602 NCKAP5LQ9HCH0 1330 aa9.61□□□□□ -0.87
SEC13-219ENST00000492602 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
SEC13-219ENST00000492602 ZMYM4Q5VZL5 1548 aa9.61□□□□□ -0.87
SEC13-219ENST00000492602 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
SEC13-219ENST00000492602 SENP3Q9H4L4 574 aaPredicted RBP9.6□□□□□ -0.87
SEC13-219ENST00000492602 RGS17Q9UGC6 210 aaPredicted RBP9.6□□□□□ -0.87
SEC13-219ENST00000492602 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.87
SEC13-219ENST00000492602 ATP10AO60312 1499 aa9.59□□□□□ -0.87
SEC13-219ENST00000492602 C9orf84Q5VXU9 1444 aa9.58□□□□□ -0.88
SEC13-219ENST00000492602 HECW1Q76N89 1606 aa9.58□□□□□ -0.88
SEC13-219ENST00000492602 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
SEC13-219ENST00000492602 TRAPPC8Q9Y2L5 1435 aa9.57□□□□□ -0.88
SEC13-219ENST00000492602 CAMSAP1Q5T5Y3 1602 aa9.57□□□□□ -0.88
SEC13-219ENST00000492602 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
SEC13-219ENST00000492602 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
SEC13-219ENST00000492602 PKD2Q13563 968 aa9.54□□□□□ -0.88
SEC13-219ENST00000492602 PPP6R1Q9UPN7 881 aa9.54□□□□□ -0.88
SEC13-219ENST00000492602 SCAPERQ9BY12 1400 aa9.54□□□□□ -0.88
SEC13-219ENST00000492602 C3P01024 1663 aa9.53□□□□□ -0.88
SEC13-219ENST00000492602 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
SEC13-219ENST00000492602 PLEKHD1A6NEE1 506 aa9.52□□□□□ -0.89
SEC13-219ENST00000492602 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
SEC13-219ENST00000492602 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
SEC13-219ENST00000492602 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
SEC13-219ENST00000492602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.48□□□□□ -0.89
SEC13-219ENST00000492602 PLA2R1Q13018 1463 aa9.47□□□□□ -0.89
SEC13-219ENST00000492602 TCOF1Q13428 1488 aaKnown RBP9.47□□□□□ -0.89
SEC13-219ENST00000492602 CPS1P31327 1500 aa9.46□□□□□ -0.89
SEC13-219ENST00000492602 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
SEC13-219ENST00000492602 AFAP1Q8N556 730 aa9.45□□□□□ -0.9
SEC13-219ENST00000492602 UPF1Q92900 1129 aaKnown RBP eCLIP9.45□□□□□ -0.9
SEC13-219ENST00000492602 NPATQ14207 1427 aa9.45□□□□□ -0.9
SEC13-219ENST00000492602 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
SEC13-219ENST00000492602 SRCAPQ6ZRS2 3230 aa9.44□□□□□ -0.9
SEC13-219ENST00000492602 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
SEC13-219ENST00000492602 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
SEC13-219ENST00000492602 SETD1AO15047 1707 aaKnown RBP9.44□□□□□ -0.9
SEC13-219ENST00000492602 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
SEC13-219ENST00000492602 PLCH2O75038 1416 aa9.43□□□□□ -0.9
SEC13-219ENST00000492602 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
SEC13-219ENST00000492602 EFCAB2Q5VUJ9 269 aa9.43□□□□□ -0.9
SEC13-219ENST00000492602 AGLP35573 1532 aa9.42□□□□□ -0.9
SEC13-219ENST00000492602 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
SEC13-219ENST00000492602 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
SEC13-219ENST00000492602 REREQ9P2R6 1566 aa9.4□□□□□ -0.9
SEC13-219ENST00000492602 CEP170BQ9Y4F5 1589 aaPredicted RBP9.4□□□□□ -0.9
SEC13-219ENST00000492602 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
SEC13-219ENST00000492602 MYO3AQ8NEV4 1616 aa9.38□□□□□ -0.91
SEC13-219ENST00000492602 KDM5CP41229 1560 aa9.37□□□□□ -0.91
SEC13-219ENST00000492602 ZNF142P52746 1687 aaPredicted RBP9.37□□□□□ -0.91
SEC13-219ENST00000492602 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
SEC13-219ENST00000492602 MLH3Q9UHC1 1453 aa9.35□□□□□ -0.91
SEC13-219ENST00000492602 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
SEC13-219ENST00000492602 TRIM52Q96A61 297 aa9.35□□□□□ -0.91
SEC13-219ENST00000492602 VWDEQ8N2E2 1590 aa9.34□□□□□ -0.91
SEC13-219ENST00000492602 MROH2AA6NES4 1674 aa9.34□□□□□ -0.91
SEC13-219ENST00000492602 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
SEC13-219ENST00000492602 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
SEC13-219ENST00000492602 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
SEC13-219ENST00000492602 NEURL4Q96JN8 1562 aa9.33□□□□□ -0.92
SEC13-219ENST00000492602 LRRC7Q96NW7 1537 aa9.32□□□□□ -0.92
SEC13-219ENST00000492602 ARHGAP5Q13017 1502 aa9.31□□□□□ -0.92
SEC13-219ENST00000492602 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
SEC13-219ENST00000492602 RNF17Q9BXT8 1623 aaKnown RBP9.31□□□□□ -0.92
SEC13-219ENST00000492602 PRXQ9BXM0 1461 aa9.31□□□□□ -0.92
SEC13-219ENST00000492602 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
SEC13-219ENST00000492602 GGT6Q6P531 493 aa9.3□□□□□ -0.92
SEC13-219ENST00000492602 POLR1AO95602 1720 aaPredicted RBP9.3□□□□□ -0.92
SEC13-219ENST00000492602 CDK13Q14004 1512 aaKnown RBP9.3□□□□□ -0.92
SEC13-219ENST00000492602 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
SEC13-219ENST00000492602 CLTCQ00610 1675 aaKnown RBP9.29□□□□□ -0.92
SEC13-219ENST00000492602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.29□□□□□ -0.92
SEC13-219ENST00000492602 FAM135BQ49AJ0 1406 aa9.28□□□□□ -0.92
SEC13-219ENST00000492602 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
SEC13-219ENST00000492602 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
SEC13-219ENST00000492602 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
SEC13-219ENST00000492602 KIDINS220Q9ULH0 1771 aa9.25□□□□□ -0.93
SEC13-219ENST00000492602 RXRBP28702 533 aa9.25□□□□□ -0.93
SEC13-219ENST00000492602 MEX3CQ5U5Q3 659 aaKnown RBP9.25□□□□□ -0.93
SEC13-219ENST00000492602 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
SEC13-219ENST00000492602 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
SEC13-219ENST00000492602 MED14O60244 1454 aa9.25□□□□□ -0.93
SEC13-219ENST00000492602 TNRQ92752 1358 aa9.24□□□□□ -0.93
SEC13-219ENST00000492602 SYNMO15061 1565 aa9.24□□□□□ -0.93
SEC13-219ENST00000492602 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
SEC13-219ENST00000492602 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
SEC13-219ENST00000492602 ABCC1P33527 1531 aa9.24□□□□□ -0.93
SEC13-219ENST00000492602 FOXD1Q16676 465 aa9.23□□□□□ -0.93
SEC13-219ENST00000492602 KIF14Q15058 1648 aa9.23□□□□□ -0.93
SEC13-219ENST00000492602 SPAG9O60271 1321 aaKnown RBP9.22□□□□□ -0.93
SEC13-219ENST00000492602 JCADQ9P266 1359 aa9.22□□□□□ -0.93
SEC13-219ENST00000492602 IQGAP1P46940 1657 aa9.21□□□□□ -0.93
SEC13-219ENST00000492602 ITSN2Q9NZM3 1697 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms