RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 PTPRMP28827 1452 aa16.45■□□□□ 0.22
TNFRSF9-203ENST00000492571 KIF21BO75037 1637 aa16.45■□□□□ 0.22
TNFRSF9-203ENST00000492571 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
TNFRSF9-203ENST00000492571 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
TNFRSF9-203ENST00000492571 NEO1Q92859 1461 aa16.42■□□□□ 0.22
TNFRSF9-203ENST00000492571 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
TNFRSF9-203ENST00000492571 POTEHQ6S545 545 aa16.41■□□□□ 0.22
TNFRSF9-203ENST00000492571 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
TNFRSF9-203ENST00000492571 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF9-203ENST00000492571 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
TNFRSF9-203ENST00000492571 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
TNFRSF9-203ENST00000492571 DENND4BO75064 1496 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF9-203ENST00000492571 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
TNFRSF9-203ENST00000492571 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
TNFRSF9-203ENST00000492571 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF9-203ENST00000492571 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
TNFRSF9-203ENST00000492571 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
TNFRSF9-203ENST00000492571 HSPA2P54652 639 aa16.29■□□□□ 0.2
TNFRSF9-203ENST00000492571 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
TNFRSF9-203ENST00000492571 MLECQ14165 292 aa16.28■□□□□ 0.2
TNFRSF9-203ENST00000492571 FANCAO15360 1455 aa16.28■□□□□ 0.2
TNFRSF9-203ENST00000492571 NUP153P49790 1475 aaKnown RBP16.28■□□□□ 0.2
TNFRSF9-203ENST00000492571 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
TNFRSF9-203ENST00000492571 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.19
TNFRSF9-203ENST00000492571 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
TNFRSF9-203ENST00000492571 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
TNFRSF9-203ENST00000492571 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
TNFRSF9-203ENST00000492571 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF9-203ENST00000492571 EEA1Q15075 1411 aa16.23■□□□□ 0.19
TNFRSF9-203ENST00000492571 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
TNFRSF9-203ENST00000492571 FRMPD1Q5SYB0 1578 aa16.22■□□□□ 0.19
TNFRSF9-203ENST00000492571 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF9-203ENST00000492571 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
TNFRSF9-203ENST00000492571 CFAP74Q9C0B2 1584 aa16.21■□□□□ 0.19
TNFRSF9-203ENST00000492571 EFCAB2Q5VUJ9 269 aa16.21■□□□□ 0.19
TNFRSF9-203ENST00000492571 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
TNFRSF9-203ENST00000492571 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
TNFRSF9-203ENST00000492571 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
TNFRSF9-203ENST00000492571 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
TNFRSF9-203ENST00000492571 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
TNFRSF9-203ENST00000492571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFRSF9-203ENST00000492571 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
TNFRSF9-203ENST00000492571 PLCH2O75038 1416 aa16.16■□□□□ 0.18
TNFRSF9-203ENST00000492571 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
TNFRSF9-203ENST00000492571 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.18
TNFRSF9-203ENST00000492571 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
TNFRSF9-203ENST00000492571 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
TNFRSF9-203ENST00000492571 ATP10AO60312 1499 aa16.14■□□□□ 0.17
TNFRSF9-203ENST00000492571 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF9-203ENST00000492571 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
TNFRSF9-203ENST00000492571 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
TNFRSF9-203ENST00000492571 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
TNFRSF9-203ENST00000492571 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
TNFRSF9-203ENST00000492571 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
TNFRSF9-203ENST00000492571 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
TNFRSF9-203ENST00000492571 DISP3Q9P2K9 1392 aa16.08■□□□□ 0.16
TNFRSF9-203ENST00000492571 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
TNFRSF9-203ENST00000492571 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
TNFRSF9-203ENST00000492571 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
TNFRSF9-203ENST00000492571 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
TNFRSF9-203ENST00000492571 ZNF518AQ6AHZ1 1483 aa16.05■□□□□ 0.16
TNFRSF9-203ENST00000492571 CLIP1P30622 1438 aa16.05■□□□□ 0.16
TNFRSF9-203ENST00000492571 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
TNFRSF9-203ENST00000492571 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
TNFRSF9-203ENST00000492571 ARHGAP5Q13017 1502 aa16.01■□□□□ 0.15
TNFRSF9-203ENST00000492571 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF9-203ENST00000492571 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF9-203ENST00000492571 SOCS7O14512 581 aa16■□□□□ 0.15
TNFRSF9-203ENST00000492571 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF9-203ENST00000492571 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
TNFRSF9-203ENST00000492571 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
TNFRSF9-203ENST00000492571 PTPRTO14522 1441 aa15.96■□□□□ 0.15
TNFRSF9-203ENST00000492571 KIF14Q15058 1648 aa15.96■□□□□ 0.15
TNFRSF9-203ENST00000492571 MYO5CQ9NQX4 1742 aa15.96■□□□□ 0.15
TNFRSF9-203ENST00000492571 TRAPPC8Q9Y2L5 1435 aa15.95■□□□□ 0.14
TNFRSF9-203ENST00000492571 ILDR2Q71H61 639 aa15.95■□□□□ 0.14
TNFRSF9-203ENST00000492571 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
TNFRSF9-203ENST00000492571 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
TNFRSF9-203ENST00000492571 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
TNFRSF9-203ENST00000492571 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
TNFRSF9-203ENST00000492571 KDM5CP41229 1560 aa15.92■□□□□ 0.14
TNFRSF9-203ENST00000492571 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF9-203ENST00000492571 REREQ9P2R6 1566 aa15.89■□□□□ 0.13
TNFRSF9-203ENST00000492571 AGLP35573 1532 aa15.89■□□□□ 0.13
TNFRSF9-203ENST00000492571 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
TNFRSF9-203ENST00000492571 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
TNFRSF9-203ENST00000492571 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
TNFRSF9-203ENST00000492571 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
TNFRSF9-203ENST00000492571 SPAG9O60271 1321 aaKnown RBP15.87■□□□□ 0.13
TNFRSF9-203ENST00000492571 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
TNFRSF9-203ENST00000492571 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
TNFRSF9-203ENST00000492571 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
TNFRSF9-203ENST00000492571 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
TNFRSF9-203ENST00000492571 ZMYM3Q14202 1370 aa15.85■□□□□ 0.13
TNFRSF9-203ENST00000492571 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
TNFRSF9-203ENST00000492571 UBAP1LF5GYI3 381 aa15.84■□□□□ 0.13
TNFRSF9-203ENST00000492571 PKD2Q13563 968 aa15.84■□□□□ 0.13
TNFRSF9-203ENST00000492571 NPATQ14207 1427 aa15.84■□□□□ 0.13
TNFRSF9-203ENST00000492571 NCKAP5LQ9HCH0 1330 aa15.83■□□□□ 0.12
TNFRSF9-203ENST00000492571 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms