RNA–Protein interactions for RNA: ENST00000492470.1

CNIH3-210, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-210ENST00000492470 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
CNIH3-210ENST00000492470 ARHGEF12Q9NZN5 1544 aa17.27■□□□□ 0.36
CNIH3-210ENST00000492470 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
CNIH3-210ENST00000492470 MLECQ14165 292 aa17.27■□□□□ 0.36
CNIH3-210ENST00000492470 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
CNIH3-210ENST00000492470 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
CNIH3-210ENST00000492470 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
CNIH3-210ENST00000492470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
CNIH3-210ENST00000492470 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
CNIH3-210ENST00000492470 PTPRTO14522 1441 aa17.2■□□□□ 0.34
CNIH3-210ENST00000492470 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
CNIH3-210ENST00000492470 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
CNIH3-210ENST00000492470 ATP10AO60312 1499 aa17.18■□□□□ 0.34
CNIH3-210ENST00000492470 CEBPAP49715 358 aaPredicted RBP17.17■□□□□ 0.34
CNIH3-210ENST00000492470 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
CNIH3-210ENST00000492470 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
CNIH3-210ENST00000492470 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
CNIH3-210ENST00000492470 FOXD1Q16676 465 aa17.11■□□□□ 0.33
CNIH3-210ENST00000492470 C3P01024 1663 aa17.1■□□□□ 0.33
CNIH3-210ENST00000492470 PLCH2O75038 1416 aa17.08■□□□□ 0.32
CNIH3-210ENST00000492470 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
CNIH3-210ENST00000492470 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
CNIH3-210ENST00000492470 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
CNIH3-210ENST00000492470 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
CNIH3-210ENST00000492470 KDM5CP41229 1560 aa17.03■□□□□ 0.32
CNIH3-210ENST00000492470 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
CNIH3-210ENST00000492470 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
CNIH3-210ENST00000492470 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
CNIH3-210ENST00000492470 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
CNIH3-210ENST00000492470 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
CNIH3-210ENST00000492470 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
CNIH3-210ENST00000492470 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
CNIH3-210ENST00000492470 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
CNIH3-210ENST00000492470 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
CNIH3-210ENST00000492470 AGLP35573 1532 aa16.97■□□□□ 0.31
CNIH3-210ENST00000492470 ESF1Q9H501 851 aaKnown RBP16.96■□□□□ 0.31
CNIH3-210ENST00000492470 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
CNIH3-210ENST00000492470 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
CNIH3-210ENST00000492470 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
CNIH3-210ENST00000492470 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
CNIH3-210ENST00000492470 KIF14Q15058 1648 aa16.94■□□□□ 0.3
CNIH3-210ENST00000492470 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
CNIH3-210ENST00000492470 NPATQ14207 1427 aa16.92■□□□□ 0.3
CNIH3-210ENST00000492470 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
CNIH3-210ENST00000492470 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
CNIH3-210ENST00000492470 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
CNIH3-210ENST00000492470 ZNF142P52746 1687 aaPredicted RBP16.9■□□□□ 0.3
CNIH3-210ENST00000492470 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
CNIH3-210ENST00000492470 PLA2R1Q13018 1463 aa16.88■□□□□ 0.29
CNIH3-210ENST00000492470 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
CNIH3-210ENST00000492470 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
CNIH3-210ENST00000492470 HSPA1LP34931 641 aa16.86■□□□□ 0.29
CNIH3-210ENST00000492470 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
CNIH3-210ENST00000492470 ABCC1P33527 1531 aa16.86■□□□□ 0.29
CNIH3-210ENST00000492470 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
CNIH3-210ENST00000492470 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
CNIH3-210ENST00000492470 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
CNIH3-210ENST00000492470 PKD2Q13563 968 aa16.84■□□□□ 0.29
CNIH3-210ENST00000492470 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
CNIH3-210ENST00000492470 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
CNIH3-210ENST00000492470 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
CNIH3-210ENST00000492470 CLIP1P30622 1438 aa16.83■□□□□ 0.28
CNIH3-210ENST00000492470 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
CNIH3-210ENST00000492470 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
CNIH3-210ENST00000492470 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
CNIH3-210ENST00000492470 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
CNIH3-210ENST00000492470 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
CNIH3-210ENST00000492470 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
CNIH3-210ENST00000492470 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
CNIH3-210ENST00000492470 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
CNIH3-210ENST00000492470 EEA1Q15075 1411 aa16.79■□□□□ 0.28
CNIH3-210ENST00000492470 CPS1P31327 1500 aa16.78■□□□□ 0.28
CNIH3-210ENST00000492470 TOM1O60784 492 aa16.77■□□□□ 0.28
CNIH3-210ENST00000492470 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
CNIH3-210ENST00000492470 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
CNIH3-210ENST00000492470 SAMD9LQ8IVG5 1584 aa16.74■□□□□ 0.27
CNIH3-210ENST00000492470 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
CNIH3-210ENST00000492470 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
CNIH3-210ENST00000492470 SHANK2Q9UPX8 1470 aa16.71■□□□□ 0.27
CNIH3-210ENST00000492470 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
CNIH3-210ENST00000492470 NEURL4Q96JN8 1562 aa16.71■□□□□ 0.27
CNIH3-210ENST00000492470 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
CNIH3-210ENST00000492470 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
CNIH3-210ENST00000492470 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
CNIH3-210ENST00000492470 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
CNIH3-210ENST00000492470 ATP7AQ04656 1500 aa16.68■□□□□ 0.26
CNIH3-210ENST00000492470 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
CNIH3-210ENST00000492470 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
CNIH3-210ENST00000492470 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
CNIH3-210ENST00000492470 VWDEQ8N2E2 1590 aa16.65■□□□□ 0.26
CNIH3-210ENST00000492470 A2MP01023 1474 aa16.65■□□□□ 0.26
CNIH3-210ENST00000492470 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
CNIH3-210ENST00000492470 RNF17Q9BXT8 1623 aaKnown RBP16.61■□□□□ 0.25
CNIH3-210ENST00000492470 GGT6Q6P531 493 aa16.6■□□□□ 0.25
CNIH3-210ENST00000492470 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
CNIH3-210ENST00000492470 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
CNIH3-210ENST00000492470 SYNMO15061 1565 aa16.58■□□□□ 0.24
CNIH3-210ENST00000492470 DEPDC5O75140 1603 aa16.57■□□□□ 0.24
CNIH3-210ENST00000492470 TNRQ92752 1358 aa16.57■□□□□ 0.24
CNIH3-210ENST00000492470 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms