RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 CD109Q6YHK3 1445 aa13.76□□□□□ -0.21
RP9-204ENST00000492391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
RP9-204ENST00000492391 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
RP9-204ENST00000492391 ATP1B4Q9UN42 357 aaPredicted RBP13.76□□□□□ -0.21
RP9-204ENST00000492391 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
RP9-204ENST00000492391 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
RP9-204ENST00000492391 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
RP9-204ENST00000492391 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
RP9-204ENST00000492391 KDM6BO15054 1643 aa13.72□□□□□ -0.21
RP9-204ENST00000492391 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
RP9-204ENST00000492391 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
RP9-204ENST00000492391 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
RP9-204ENST00000492391 MYO5CQ9NQX4 1742 aa13.68□□□□□ -0.22
RP9-204ENST00000492391 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
RP9-204ENST00000492391 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
RP9-204ENST00000492391 PLCH2O75038 1416 aa13.66□□□□□ -0.22
RP9-204ENST00000492391 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
RP9-204ENST00000492391 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
RP9-204ENST00000492391 CAPN15O75808 1086 aa13.65□□□□□ -0.22
RP9-204ENST00000492391 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
RP9-204ENST00000492391 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
RP9-204ENST00000492391 PREX2Q70Z35 1606 aa13.64□□□□□ -0.23
RP9-204ENST00000492391 NEO1Q92859 1461 aa13.63□□□□□ -0.23
RP9-204ENST00000492391 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
RP9-204ENST00000492391 FANCAO15360 1455 aa13.62□□□□□ -0.23
RP9-204ENST00000492391 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
RP9-204ENST00000492391 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
RP9-204ENST00000492391 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
RP9-204ENST00000492391 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
RP9-204ENST00000492391 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
RP9-204ENST00000492391 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
RP9-204ENST00000492391 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
RP9-204ENST00000492391 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
RP9-204ENST00000492391 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
RP9-204ENST00000492391 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.24
RP9-204ENST00000492391 SAMD9LQ8IVG5 1584 aa13.57□□□□□ -0.24
RP9-204ENST00000492391 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
RP9-204ENST00000492391 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
RP9-204ENST00000492391 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
RP9-204ENST00000492391 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
RP9-204ENST00000492391 DSG3P32926 999 aa13.55□□□□□ -0.24
RP9-204ENST00000492391 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
RP9-204ENST00000492391 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
RP9-204ENST00000492391 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
RP9-204ENST00000492391 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
RP9-204ENST00000492391 SCAPERQ9BY12 1400 aa13.54□□□□□ -0.24
RP9-204ENST00000492391 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
RP9-204ENST00000492391 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
RP9-204ENST00000492391 ABCC1P33527 1531 aa13.53□□□□□ -0.24
RP9-204ENST00000492391 TRAPPC8Q9Y2L5 1435 aa13.52□□□□□ -0.25
RP9-204ENST00000492391 ZMYM4Q5VZL5 1548 aa13.52□□□□□ -0.25
RP9-204ENST00000492391 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
RP9-204ENST00000492391 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
RP9-204ENST00000492391 KDM5CP41229 1560 aa13.5□□□□□ -0.25
RP9-204ENST00000492391 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
RP9-204ENST00000492391 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
RP9-204ENST00000492391 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
RP9-204ENST00000492391 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
RP9-204ENST00000492391 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
RP9-204ENST00000492391 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
RP9-204ENST00000492391 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.25
RP9-204ENST00000492391 APLP2Q06481 763 aa13.47□□□□□ -0.25
RP9-204ENST00000492391 ARHGEF40Q8TER5 1519 aa13.46□□□□□ -0.25
RP9-204ENST00000492391 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
RP9-204ENST00000492391 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
RP9-204ENST00000492391 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
RP9-204ENST00000492391 ABCA6Q8N139 1617 aa13.45□□□□□ -0.26
RP9-204ENST00000492391 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
RP9-204ENST00000492391 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
RP9-204ENST00000492391 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
RP9-204ENST00000492391 DIP2CQ9Y2E4 1556 aa13.43□□□□□ -0.26
RP9-204ENST00000492391 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 HECW2Q9P2P5 1572 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 MAGI2Q86UL8 1455 aa13.42□□□□□ -0.26
RP9-204ENST00000492391 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
RP9-204ENST00000492391 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
RP9-204ENST00000492391 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
RP9-204ENST00000492391 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
RP9-204ENST00000492391 ARHGEF5Q12774 1597 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 ATP10AO60312 1499 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
RP9-204ENST00000492391 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
RP9-204ENST00000492391 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
RP9-204ENST00000492391 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
RP9-204ENST00000492391 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
RP9-204ENST00000492391 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
RP9-204ENST00000492391 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
RP9-204ENST00000492391 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
RP9-204ENST00000492391 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
RP9-204ENST00000492391 CROCC2H7BZ55 1655 aa13.34□□□□□ -0.27
RP9-204ENST00000492391 PLXNC1O60486 1568 aa13.33□□□□□ -0.28
RP9-204ENST00000492391 ABCC5O15440 1437 aa13.33□□□□□ -0.28
RP9-204ENST00000492391 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
RP9-204ENST00000492391 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms