RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 AEBP1Q8IUX7 1158 aa5.46□□□□□ -1.54
ATPAF1-206ENST00000492233 P3H3Q8IVL6 736 aa5.46□□□□□ -1.54
ATPAF1-206ENST00000492233 ZC3H15Q8WU90 426 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-206ENST00000492233 POLR3GLQ9BT43 218 aa5.46□□□□□ -1.54
ATPAF1-206ENST00000492233 POLA1P09884 1462 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-206ENST00000492233 ZNF316A6NFI3 1004 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-206ENST00000492233 DIEXFQ68CQ4 756 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-206ENST00000492233 DHX57Q6P158 1386 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 CCNB3Q8WWL7 1395 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 FHAD1B1AJZ9 1412 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 TMCO4Q5TGY1 634 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 HS6ST3Q8IZP7 471 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 LAMC3Q9Y6N6 1575 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 RAD54L2Q9Y4B4 1467 aa5.44□□□□□ -1.54
ATPAF1-206ENST00000492233 FOXD4L5Q5VV16 416 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-206ENST00000492233 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-206ENST00000492233 AQRO60306 1485 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATPAF1-206ENST00000492233 EFCAB5A4FU69 1503 aa5.43□□□□□ -1.54
ATPAF1-206ENST00000492233 TIAM1Q13009 1591 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 PDS5BQ9NTI5 1447 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 NESP48681 1621 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 IL27Q8NEV9 243 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 UBE2Q2Q8WVN8 375 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 ZNF428Q96B54 188 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 TRAIPQ9BWF2 469 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 WDR70Q9NW82 654 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 USP35Q9P2H5 1018 aa5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 URB2Q14146 1524 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-206ENST00000492233 CUL7Q14999 1698 aa5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 LRRC9Q6ZRR7 1453 aa5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 E9PSI1 815 aa5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 GTPBP6O43824 516 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 DHX37Q8IY37 1157 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 CIZ1Q9ULV3 898 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-206ENST00000492233 CASKIN1Q8WXD9 1431 aa5.4□□□□□ -1.54
ATPAF1-206ENST00000492233 MFAP1P55081 439 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-206ENST00000492233 ACIN1Q9UKV3 1341 aaKnown RBP5.4□□□□□ -1.55
ATPAF1-206ENST00000492233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.4□□□□□ -1.55
ATPAF1-206ENST00000492233 FYCO1Q9BQS8 1478 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 WDR97A6NE52 1622 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 ABCA5Q8WWZ7 1642 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 NKX1-1Q15270 411 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 CCDC82Q8N4S0 544 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 GZF1Q9H116 711 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 PHLDB1Q86UU1 1377 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 FHOD3Q2V2M9 1422 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 FMN1Q68DA7 1419 aa5.39□□□□□ -1.55
ATPAF1-206ENST00000492233 PCF11O94913 1555 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 CFAP43Q8NDM7 1665 aa5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 ABCB7O75027 752 aa5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 DSG3P32926 999 aa5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 MKRN3Q13064 507 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 GAPVD1Q14C86 1478 aa5.38□□□□□ -1.55
ATPAF1-206ENST00000492233 CENPBP07199 599 aaPredicted RBP5.37□□□□□ -1.55
ATPAF1-206ENST00000492233 TDRD9Q8NDG6 1382 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-206ENST00000492233 SETD5Q9C0A6 1442 aa5.37□□□□□ -1.55
ATPAF1-206ENST00000492233 NEUROD1Q13562 356 aa5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 KCNV2Q8TDN2 545 aa5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 ZNF219Q9P2Y4 722 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 RAB3GAP2Q9H2M9 1393 aa5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 SNAPC4Q5SXM2 1469 aa5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 SAMD9Q5K651 1589 aa5.36□□□□□ -1.55
ATPAF1-206ENST00000492233 THOC2Q8NI27 1593 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-206ENST00000492233 GPBP1L1Q9HC44 474 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-206ENST00000492233 CTTNBP2Q8WZ74 1663 aa5.34□□□□□ -1.55
ATPAF1-206ENST00000492233 TARBP1Q13395 1621 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-206ENST00000492233 MAPKBP1O60336 1514 aa5.34□□□□□ -1.55
ATPAF1-206ENST00000492233 GRIN2BQ13224 1484 aa5.34□□□□□ -1.55
ATPAF1-206ENST00000492233 PLCD3Q8N3E9 789 aa5.34□□□□□ -1.55
ATPAF1-206ENST00000492233 MRC2Q9UBG0 1479 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 FGD6Q6ZV73 1430 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 PDE4CQ08493 712 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 TAF7LQ5H9L4 462 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 RSPH4AQ5TD94 716 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 MIER1Q8N108 512 aa5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 FAM177A1Q8N128 213 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-206ENST00000492233 ZMYND10O75800 440 aa5.32□□□□□ -1.56
ATPAF1-206ENST00000492233 ITGAEP38570 1179 aa5.32□□□□□ -1.56
ATPAF1-206ENST00000492233 FLIIQ13045 1269 aa5.32□□□□□ -1.56
ATPAF1-206ENST00000492233 MKRN4PQ13434 485 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-206ENST00000492233 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-206ENST00000492233 MTUS2Q5JR59 1369 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 ADAMTS12P58397 1594 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 TRAK2O60296 914 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 FBXW7Q969H0 707 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 ATP1B4Q9UN42 357 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 ARHGEF11O15085 1522 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 EHBP1L1Q8N3D4 1523 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 NCOA2Q15596 1464 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 CCDC18Q5T9S5 1454 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 IFT140Q96RY7 1462 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 HFM1A2PYH4 1435 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 KIF21AQ7Z4S6 1674 aa5.31□□□□□ -1.56
ATPAF1-206ENST00000492233 PPM1GO15355 546 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-206ENST00000492233 MYOM3Q5VTT5 1437 aa5.3□□□□□ -1.56
ATPAF1-206ENST00000492233 WDR62O43379 1518 aa5.29□□□□□ -1.56
ATPAF1-206ENST00000492233 UGGT2Q9NYU1 1516 aa5.29□□□□□ -1.56
ATPAF1-206ENST00000492233 TCOF1Q13428 1488 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-206ENST00000492233 AK7Q96M32 723 aa5.29□□□□□ -1.56
ATPAF1-206ENST00000492233 KDM4CQ9H3R0 1056 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms