RNA–Protein interactions for RNA: ENST00000492048.5

LAMA1-206, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 2,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-206ENST00000492048 WDR62O43379 1518 aa18.81■□□□□ 0.6
LAMA1-206ENST00000492048 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
LAMA1-206ENST00000492048 CUX1P39880 1505 aa18.8■□□□□ 0.6
LAMA1-206ENST00000492048 CFAP43Q8NDM7 1665 aa18.8■□□□□ 0.6
LAMA1-206ENST00000492048 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
LAMA1-206ENST00000492048 UACAQ9BZF9 1416 aa18.8■□□□□ 0.6
LAMA1-206ENST00000492048 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
LAMA1-206ENST00000492048 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
LAMA1-206ENST00000492048 CENPJQ9HC77 1338 aaPredicted RBP18.78■□□□□ 0.6
LAMA1-206ENST00000492048 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
LAMA1-206ENST00000492048 CCDC7Q96M83 1385 aa18.77■□□□□ 0.6
LAMA1-206ENST00000492048 CLCN1P35523 988 aa18.77■□□□□ 0.59
LAMA1-206ENST00000492048 PDE4CQ08493 712 aa18.76■□□□□ 0.59
LAMA1-206ENST00000492048 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
LAMA1-206ENST00000492048 FGD1P98174 961 aa18.74■□□□□ 0.59
LAMA1-206ENST00000492048 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
LAMA1-206ENST00000492048 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
LAMA1-206ENST00000492048 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
LAMA1-206ENST00000492048 NAP1L5Q96NT1 182 aaPredicted RBP18.73■□□□□ 0.59
LAMA1-206ENST00000492048 FRAT2O75474 233 aaPredicted RBP18.72■□□□□ 0.59
LAMA1-206ENST00000492048 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
LAMA1-206ENST00000492048 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
LAMA1-206ENST00000492048 PDIA4P13667 645 aaKnown RBP18.69■□□□□ 0.58
LAMA1-206ENST00000492048 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
LAMA1-206ENST00000492048 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
LAMA1-206ENST00000492048 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
LAMA1-206ENST00000492048 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
LAMA1-206ENST00000492048 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
LAMA1-206ENST00000492048 AAMPQ13685 434 aa18.67■□□□□ 0.58
LAMA1-206ENST00000492048 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
LAMA1-206ENST00000492048 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
LAMA1-206ENST00000492048 RBM10P98175 930 aaKnown RBP18.66■□□□□ 0.58
LAMA1-206ENST00000492048 PDCL3Q9H2J4 239 aa18.63■□□□□ 0.57
LAMA1-206ENST00000492048 ZNF608Q9ULD9 1512 aaPredicted RBP18.61■□□□□ 0.57
LAMA1-206ENST00000492048 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
LAMA1-206ENST00000492048 PRDM4Q9UKN5 801 aa18.6■□□□□ 0.57
LAMA1-206ENST00000492048 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
LAMA1-206ENST00000492048 TPM2P07951 284 aa18.58■□□□□ 0.56
LAMA1-206ENST00000492048 HECW1Q76N89 1606 aa18.58■□□□□ 0.56
LAMA1-206ENST00000492048 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
LAMA1-206ENST00000492048 POGKQ9P215 609 aa18.57■□□□□ 0.56
LAMA1-206ENST00000492048 DHX29Q7Z478 1369 aaKnown RBP18.57■□□□□ 0.56
LAMA1-206ENST00000492048 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
LAMA1-206ENST00000492048 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
LAMA1-206ENST00000492048 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
LAMA1-206ENST00000492048 RCAN3Q9UKA8 241 aa18.55■□□□□ 0.56
LAMA1-206ENST00000492048 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
LAMA1-206ENST00000492048 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.56
LAMA1-206ENST00000492048 KIF7Q2M1P5 1343 aa18.54■□□□□ 0.56
LAMA1-206ENST00000492048 FAM161AQ3B820 660 aa18.54■□□□□ 0.56
LAMA1-206ENST00000492048 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
LAMA1-206ENST00000492048 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
LAMA1-206ENST00000492048 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
LAMA1-206ENST00000492048 A0A0U1RQG5 324 aaPredicted RBP18.52■□□□□ 0.56
LAMA1-206ENST00000492048 FMN1Q68DA7 1419 aa18.52■□□□□ 0.56
LAMA1-206ENST00000492048 NAIPQ13075 1403 aa18.52■□□□□ 0.55
LAMA1-206ENST00000492048 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
LAMA1-206ENST00000492048 PCF11O94913 1555 aaKnown RBP18.5■□□□□ 0.55
LAMA1-206ENST00000492048 MYOM3Q5VTT5 1437 aa18.5■□□□□ 0.55
LAMA1-206ENST00000492048 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
LAMA1-206ENST00000492048 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
LAMA1-206ENST00000492048 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
LAMA1-206ENST00000492048 C8orf34Q49A92 452 aa18.5■□□□□ 0.55
LAMA1-206ENST00000492048 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
LAMA1-206ENST00000492048 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
LAMA1-206ENST00000492048 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
LAMA1-206ENST00000492048 EIF4G3O43432 1585 aaKnown RBP18.46■□□□□ 0.55
LAMA1-206ENST00000492048 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
LAMA1-206ENST00000492048 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
LAMA1-206ENST00000492048 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
LAMA1-206ENST00000492048 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
LAMA1-206ENST00000492048 BCL11BQ9C0K0 894 aaPredicted RBP18.43■□□□□ 0.54
LAMA1-206ENST00000492048 FYCO1Q9BQS8 1478 aa18.43■□□□□ 0.54
LAMA1-206ENST00000492048 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
LAMA1-206ENST00000492048 ESPNB1AK53 854 aa18.42■□□□□ 0.54
LAMA1-206ENST00000492048 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
LAMA1-206ENST00000492048 MAP7D2Q96T17 732 aa18.41■□□□□ 0.54
LAMA1-206ENST00000492048 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
LAMA1-206ENST00000492048 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
LAMA1-206ENST00000492048 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
LAMA1-206ENST00000492048 TAF7LQ5H9L4 462 aa18.4■□□□□ 0.54
LAMA1-206ENST00000492048 MRE11P49959 708 aa18.39■□□□□ 0.53
LAMA1-206ENST00000492048 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
LAMA1-206ENST00000492048 TERF1P54274 439 aa18.38■□□□□ 0.53
LAMA1-206ENST00000492048 TMC1Q8TDI8 760 aa18.38■□□□□ 0.53
LAMA1-206ENST00000492048 BECN1Q14457 450 aa18.37■□□□□ 0.53
LAMA1-206ENST00000492048 TEX14Q8IWB6 1497 aa18.37■□□□□ 0.53
LAMA1-206ENST00000492048 RGS3P49796 1198 aa18.37■□□□□ 0.53
LAMA1-206ENST00000492048 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
LAMA1-206ENST00000492048 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
LAMA1-206ENST00000492048 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 ROCK2O75116 1388 aaKnown RBP18.35■□□□□ 0.53
LAMA1-206ENST00000492048 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
LAMA1-206ENST00000492048 FBLN2P98095 1184 aa18.34■□□□□ 0.53
LAMA1-206ENST00000492048 INSRP06213 1382 aa18.34■□□□□ 0.53
LAMA1-206ENST00000492048 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms