RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 EFCAB5A4FU69 1503 aa17.62■□□□□ 0.41
PCYT1A-216ENST00000491544 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
PCYT1A-216ENST00000491544 SETD1BQ9UPS6 1966 aaKnown RBP17.56■□□□□ 0.4
PCYT1A-216ENST00000491544 TOM1O60784 492 aa17.55■□□□□ 0.4
PCYT1A-216ENST00000491544 MAGI2Q86UL8 1455 aa17.55■□□□□ 0.4
PCYT1A-216ENST00000491544 CAMSAP1Q5T5Y3 1602 aa17.53■□□□□ 0.4
PCYT1A-216ENST00000491544 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
PCYT1A-216ENST00000491544 ATP10BO94823 1461 aa17.5■□□□□ 0.39
PCYT1A-216ENST00000491544 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
PCYT1A-216ENST00000491544 POTEAQ6S8J7 498 aa17.49■□□□□ 0.39
PCYT1A-216ENST00000491544 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
PCYT1A-216ENST00000491544 SETD1AO15047 1707 aaKnown RBP17.48■□□□□ 0.39
PCYT1A-216ENST00000491544 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
PCYT1A-216ENST00000491544 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
PCYT1A-216ENST00000491544 C3P01024 1663 aa17.45■□□□□ 0.38
PCYT1A-216ENST00000491544 ATP10AO60312 1499 aa17.45■□□□□ 0.38
PCYT1A-216ENST00000491544 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
PCYT1A-216ENST00000491544 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
PCYT1A-216ENST00000491544 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
PCYT1A-216ENST00000491544 CFAP74Q9C0B2 1584 aa17.41■□□□□ 0.38
PCYT1A-216ENST00000491544 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
PCYT1A-216ENST00000491544 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
PCYT1A-216ENST00000491544 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
PCYT1A-216ENST00000491544 CPS1P31327 1500 aa17.37■□□□□ 0.37
PCYT1A-216ENST00000491544 PKD2Q13563 968 aa17.37■□□□□ 0.37
PCYT1A-216ENST00000491544 UPF1Q92900 1129 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCYT1A-216ENST00000491544 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
PCYT1A-216ENST00000491544 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
PCYT1A-216ENST00000491544 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
PCYT1A-216ENST00000491544 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
PCYT1A-216ENST00000491544 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
PCYT1A-216ENST00000491544 NPATQ14207 1427 aa17.28■□□□□ 0.36
PCYT1A-216ENST00000491544 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
PCYT1A-216ENST00000491544 ZNF142P52746 1687 aaPredicted RBP17.24■□□□□ 0.35
PCYT1A-216ENST00000491544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCYT1A-216ENST00000491544 AGLP35573 1532 aa17.22■□□□□ 0.35
PCYT1A-216ENST00000491544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
PCYT1A-216ENST00000491544 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
PCYT1A-216ENST00000491544 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
PCYT1A-216ENST00000491544 REREQ9P2R6 1566 aa17.21■□□□□ 0.35
PCYT1A-216ENST00000491544 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
PCYT1A-216ENST00000491544 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
PCYT1A-216ENST00000491544 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
PCYT1A-216ENST00000491544 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
PCYT1A-216ENST00000491544 VWDEQ8N2E2 1590 aa17.16■□□□□ 0.34
PCYT1A-216ENST00000491544 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
PCYT1A-216ENST00000491544 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
PCYT1A-216ENST00000491544 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
PCYT1A-216ENST00000491544 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
PCYT1A-216ENST00000491544 NEURL4Q96JN8 1562 aa17.14■□□□□ 0.33
PCYT1A-216ENST00000491544 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
PCYT1A-216ENST00000491544 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
PCYT1A-216ENST00000491544 KDM5CP41229 1560 aa17.12■□□□□ 0.33
PCYT1A-216ENST00000491544 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
PCYT1A-216ENST00000491544 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
PCYT1A-216ENST00000491544 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
PCYT1A-216ENST00000491544 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
PCYT1A-216ENST00000491544 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
PCYT1A-216ENST00000491544 PLCH2O75038 1416 aa17.09■□□□□ 0.33
PCYT1A-216ENST00000491544 EEA1Q15075 1411 aa17.09■□□□□ 0.33
PCYT1A-216ENST00000491544 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
PCYT1A-216ENST00000491544 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
PCYT1A-216ENST00000491544 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
PCYT1A-216ENST00000491544 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
PCYT1A-216ENST00000491544 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
PCYT1A-216ENST00000491544 A2ML1A8K2U0 1454 aa17.03■□□□□ 0.32
PCYT1A-216ENST00000491544 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
PCYT1A-216ENST00000491544 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
PCYT1A-216ENST00000491544 SYNMO15061 1565 aa17.02■□□□□ 0.31
PCYT1A-216ENST00000491544 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
PCYT1A-216ENST00000491544 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
PCYT1A-216ENST00000491544 SETBP1Q9Y6X0 1596 aa16.99■□□□□ 0.31
PCYT1A-216ENST00000491544 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
PCYT1A-216ENST00000491544 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
PCYT1A-216ENST00000491544 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
PCYT1A-216ENST00000491544 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
PCYT1A-216ENST00000491544 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
PCYT1A-216ENST00000491544 NPHP4O75161 1426 aaPredicted RBP16.95■□□□□ 0.3
PCYT1A-216ENST00000491544 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
PCYT1A-216ENST00000491544 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
PCYT1A-216ENST00000491544 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
PCYT1A-216ENST00000491544 MED14O60244 1454 aa16.93■□□□□ 0.3
PCYT1A-216ENST00000491544 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
PCYT1A-216ENST00000491544 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
PCYT1A-216ENST00000491544 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
PCYT1A-216ENST00000491544 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
PCYT1A-216ENST00000491544 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
PCYT1A-216ENST00000491544 MYO5CQ9NQX4 1742 aa16.89■□□□□ 0.29
PCYT1A-216ENST00000491544 RXRBP28702 533 aa16.88■□□□□ 0.29
PCYT1A-216ENST00000491544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.291e-6■■■■■ 48.1
PCYT1A-216ENST00000491544 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
PCYT1A-216ENST00000491544 LRP6O75581 1613 aa16.87■□□□□ 0.29
PCYT1A-216ENST00000491544 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
PCYT1A-216ENST00000491544 JCADQ9P266 1359 aa16.86■□□□□ 0.29
PCYT1A-216ENST00000491544 ABCC1P33527 1531 aa16.86■□□□□ 0.29
PCYT1A-216ENST00000491544 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
PCYT1A-216ENST00000491544 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
PCYT1A-216ENST00000491544 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
PCYT1A-216ENST00000491544 FOXD1Q16676 465 aa16.83■□□□□ 0.28
PCYT1A-216ENST00000491544 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms