RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 CLIP1P30622 1438 aa20.27■□□□□ 0.83
TMCO3-208ENST00000491166 MLECQ14165 292 aa20.26■□□□□ 0.83
TMCO3-208ENST00000491166 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
TMCO3-208ENST00000491166 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
TMCO3-208ENST00000491166 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
TMCO3-208ENST00000491166 KIF14Q15058 1648 aa20.24■□□□□ 0.83
TMCO3-208ENST00000491166 TROQ12816 1431 aaPredicted RBP20.23■□□□□ 0.83
TMCO3-208ENST00000491166 CASKIN1Q8WXD9 1431 aa20.23■□□□□ 0.83
TMCO3-208ENST00000491166 PLCH2O75038 1416 aa20.22■□□□□ 0.83
TMCO3-208ENST00000491166 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
TMCO3-208ENST00000491166 SIGLEC1Q9BZZ2 1709 aa20.21■□□□□ 0.83
TMCO3-208ENST00000491166 CFAP74Q9C0B2 1584 aa20.21■□□□□ 0.83
TMCO3-208ENST00000491166 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
TMCO3-208ENST00000491166 RICTORQ6R327 1708 aa20.18■□□□□ 0.82
TMCO3-208ENST00000491166 SCAPERQ9BY12 1400 aa20.18■□□□□ 0.82
TMCO3-208ENST00000491166 YEATS2Q9ULM3 1422 aa20.18■□□□□ 0.82
TMCO3-208ENST00000491166 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
TMCO3-208ENST00000491166 EFCAB2Q5VUJ9 269 aa20.16■□□□□ 0.82
TMCO3-208ENST00000491166 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
TMCO3-208ENST00000491166 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
TMCO3-208ENST00000491166 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
TMCO3-208ENST00000491166 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
TMCO3-208ENST00000491166 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
TMCO3-208ENST00000491166 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
TMCO3-208ENST00000491166 CEBPAP49715 358 aaPredicted RBP20.13■□□□□ 0.81
TMCO3-208ENST00000491166 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
TMCO3-208ENST00000491166 ZFYVE16Q7Z3T8 1539 aa20.11■□□□□ 0.81
TMCO3-208ENST00000491166 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
TMCO3-208ENST00000491166 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
TMCO3-208ENST00000491166 AFAP1Q8N556 730 aa20.07■□□□□ 0.8
TMCO3-208ENST00000491166 LTBP4Q8N2S1 1624 aa20.04■□□□□ 0.8
TMCO3-208ENST00000491166 CDC42BPBQ9Y5S2 1711 aa20.04■□□□□ 0.8
TMCO3-208ENST00000491166 MAGI2Q86UL8 1455 aa20.04■□□□□ 0.8
TMCO3-208ENST00000491166 UHRF1BP1Q6BDS2 1440 aa20.03■□□□□ 0.8
TMCO3-208ENST00000491166 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
TMCO3-208ENST00000491166 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
TMCO3-208ENST00000491166 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
TMCO3-208ENST00000491166 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.79
TMCO3-208ENST00000491166 ZNF518AQ6AHZ1 1483 aa20.01■□□□□ 0.79
TMCO3-208ENST00000491166 PTPRTO14522 1441 aa20.01■□□□□ 0.79
TMCO3-208ENST00000491166 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
TMCO3-208ENST00000491166 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
TMCO3-208ENST00000491166 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
TMCO3-208ENST00000491166 ATP10AO60312 1499 aa19.98■□□□□ 0.79
TMCO3-208ENST00000491166 ABCC1P33527 1531 aa19.97■□□□□ 0.79
TMCO3-208ENST00000491166 KDM5CP41229 1560 aa19.97■□□□□ 0.79
TMCO3-208ENST00000491166 GPATCH8Q9UKJ3 1502 aaKnown RBP19.97■□□□□ 0.79
TMCO3-208ENST00000491166 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
TMCO3-208ENST00000491166 IQSEC2Q5JU85 1478 aa19.96■□□□□ 0.79
TMCO3-208ENST00000491166 UBAP1LF5GYI3 381 aa19.95■□□□□ 0.78
TMCO3-208ENST00000491166 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
TMCO3-208ENST00000491166 ITSN2Q9NZM3 1697 aa19.93■□□□□ 0.78
TMCO3-208ENST00000491166 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
TMCO3-208ENST00000491166 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
TMCO3-208ENST00000491166 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
TMCO3-208ENST00000491166 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
TMCO3-208ENST00000491166 SETD1BQ9UPS6 1966 aaKnown RBP19.91■□□□□ 0.78
TMCO3-208ENST00000491166 SYCP2Q9BX26 1530 aa19.91■□□□□ 0.78
TMCO3-208ENST00000491166 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
TMCO3-208ENST00000491166 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
TMCO3-208ENST00000491166 MLH3Q9UHC1 1453 aa19.89■□□□□ 0.77
TMCO3-208ENST00000491166 MED1Q15648 1581 aaPredicted RBP19.87■□□□□ 0.77
TMCO3-208ENST00000491166 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
TMCO3-208ENST00000491166 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
TMCO3-208ENST00000491166 ZNF335Q9H4Z2 1342 aaPredicted RBP19.85■□□□□ 0.77
TMCO3-208ENST00000491166 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
TMCO3-208ENST00000491166 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
TMCO3-208ENST00000491166 C3P01024 1663 aa19.84■□□□□ 0.77
TMCO3-208ENST00000491166 KIDINS220Q9ULH0 1771 aa19.84■□□□□ 0.77
TMCO3-208ENST00000491166 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
TMCO3-208ENST00000491166 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
TMCO3-208ENST00000491166 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
TMCO3-208ENST00000491166 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
TMCO3-208ENST00000491166 PLEKHH2Q8IVE3 1493 aa19.8■□□□□ 0.76
TMCO3-208ENST00000491166 REREQ9P2R6 1566 aa19.8■□□□□ 0.76
TMCO3-208ENST00000491166 HSPA1LP34931 641 aa19.8■□□□□ 0.76
TMCO3-208ENST00000491166 NCKAP5LQ9HCH0 1330 aa19.77■□□□□ 0.76
TMCO3-208ENST00000491166 ATP7AQ04656 1500 aa19.77■□□□□ 0.76
TMCO3-208ENST00000491166 CAMSAP1Q5T5Y3 1602 aa19.77■□□□□ 0.76
TMCO3-208ENST00000491166 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
TMCO3-208ENST00000491166 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.76
TMCO3-208ENST00000491166 AGLP35573 1532 aa19.76■□□□□ 0.75
TMCO3-208ENST00000491166 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
TMCO3-208ENST00000491166 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
TMCO3-208ENST00000491166 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
TMCO3-208ENST00000491166 LRRC9Q6ZRR7 1453 aa19.74■□□□□ 0.75
TMCO3-208ENST00000491166 MBD5Q9P267 1494 aa19.74■□□□□ 0.75
TMCO3-208ENST00000491166 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
TMCO3-208ENST00000491166 CAMSAP2Q08AD1 1489 aa19.72■□□□□ 0.75
TMCO3-208ENST00000491166 A2MP01023 1474 aa19.71■□□□□ 0.75
TMCO3-208ENST00000491166 GGT6Q6P531 493 aa19.67■□□□□ 0.74
TMCO3-208ENST00000491166 PLXNC1O60486 1568 aa19.66■□□□□ 0.74
TMCO3-208ENST00000491166 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
TMCO3-208ENST00000491166 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
TMCO3-208ENST00000491166 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
TMCO3-208ENST00000491166 CNTLNQ9NXG0 1405 aa19.63■□□□□ 0.73
TMCO3-208ENST00000491166 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
TMCO3-208ENST00000491166 APLP2Q06481 763 aa19.62■□□□□ 0.73
TMCO3-208ENST00000491166 ADGBQ8N7X0 1667 aa19.61■□□□□ 0.73
TMCO3-208ENST00000491166 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms