RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
FXR1-220ENST00000491062 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
FXR1-220ENST00000491062 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
FXR1-220ENST00000491062 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
FXR1-220ENST00000491062 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
FXR1-220ENST00000491062 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
FXR1-220ENST00000491062 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
FXR1-220ENST00000491062 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
FXR1-220ENST00000491062 NAIPQ13075 1403 aa17.42■□□□□ 0.38
FXR1-220ENST00000491062 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
FXR1-220ENST00000491062 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
FXR1-220ENST00000491062 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
FXR1-220ENST00000491062 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
FXR1-220ENST00000491062 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
FXR1-220ENST00000491062 TCOF1Q13428 1488 aaKnown RBP17.4■□□□□ 0.38
FXR1-220ENST00000491062 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
FXR1-220ENST00000491062 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
FXR1-220ENST00000491062 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
FXR1-220ENST00000491062 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
FXR1-220ENST00000491062 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
FXR1-220ENST00000491062 VASPP50552 380 aaPredicted RBP17.37■□□□□ 0.37
FXR1-220ENST00000491062 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
FXR1-220ENST00000491062 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
FXR1-220ENST00000491062 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
FXR1-220ENST00000491062 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
FXR1-220ENST00000491062 IQGAP2Q13576 1575 aa17.31■□□□□ 0.36
FXR1-220ENST00000491062 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
FXR1-220ENST00000491062 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
FXR1-220ENST00000491062 ANP32CO43423 234 aa17.3■□□□□ 0.36
FXR1-220ENST00000491062 WDR62O43379 1518 aa17.28■□□□□ 0.36
FXR1-220ENST00000491062 MIA2Q96PC5 1412 aa17.27■□□□□ 0.36
FXR1-220ENST00000491062 EPRSP07814 1512 aaKnown RBP17.27■□□□□ 0.35
FXR1-220ENST00000491062 DENND4BO75064 1496 aaPredicted RBP17.26■□□□□ 0.35
FXR1-220ENST00000491062 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
FXR1-220ENST00000491062 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
FXR1-220ENST00000491062 KDM6BO15054 1643 aa17.22■□□□□ 0.35
FXR1-220ENST00000491062 SPDYE1Q8NFV5 336 aaPredicted RBP17.22■□□□□ 0.35
FXR1-220ENST00000491062 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
FXR1-220ENST00000491062 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
FXR1-220ENST00000491062 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
FXR1-220ENST00000491062 CDK13Q14004 1512 aaKnown RBP17.19■□□□□ 0.34
FXR1-220ENST00000491062 NEFLP07196 543 aa17.17■□□□□ 0.34
FXR1-220ENST00000491062 DNMT1P26358 1616 aaKnown RBP17.17■□□□□ 0.34
FXR1-220ENST00000491062 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
FXR1-220ENST00000491062 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
FXR1-220ENST00000491062 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
FXR1-220ENST00000491062 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
FXR1-220ENST00000491062 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
FXR1-220ENST00000491062 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
FXR1-220ENST00000491062 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
FXR1-220ENST00000491062 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
FXR1-220ENST00000491062 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
FXR1-220ENST00000491062 BCANQ96GW7 911 aa17.11■□□□□ 0.33
FXR1-220ENST00000491062 DAPK1P53355 1430 aa17.11■□□□□ 0.33
FXR1-220ENST00000491062 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
FXR1-220ENST00000491062 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
FXR1-220ENST00000491062 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
FXR1-220ENST00000491062 TEX14Q8IWB6 1497 aa17.09■□□□□ 0.33
FXR1-220ENST00000491062 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
FXR1-220ENST00000491062 RAPGEF6Q8TEU7 1601 aa17.09■□□□□ 0.33
FXR1-220ENST00000491062 NCOA1Q15788 1441 aa17.08■□□□□ 0.33
FXR1-220ENST00000491062 DISP1Q96F81 1524 aa17.08■□□□□ 0.32
FXR1-220ENST00000491062 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
FXR1-220ENST00000491062 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
FXR1-220ENST00000491062 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
FXR1-220ENST00000491062 PRR29P0C7W0 189 aa17.07■□□□□ 0.32
FXR1-220ENST00000491062 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
FXR1-220ENST00000491062 NUP153P49790 1475 aaKnown RBP17.06■□□□□ 0.32
FXR1-220ENST00000491062 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
FXR1-220ENST00000491062 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
FXR1-220ENST00000491062 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
FXR1-220ENST00000491062 ABCC5O15440 1437 aa17.06■□□□□ 0.32
FXR1-220ENST00000491062 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
FXR1-220ENST00000491062 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
FXR1-220ENST00000491062 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
FXR1-220ENST00000491062 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
FXR1-220ENST00000491062 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.32
FXR1-220ENST00000491062 CROCC2H7BZ55 1655 aa17.02■□□□□ 0.32
FXR1-220ENST00000491062 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
FXR1-220ENST00000491062 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
FXR1-220ENST00000491062 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
FXR1-220ENST00000491062 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
FXR1-220ENST00000491062 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
FXR1-220ENST00000491062 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
FXR1-220ENST00000491062 ADGRL2O95490 1459 aa16.98■□□□□ 0.31
FXR1-220ENST00000491062 PZPP20742 1482 aa16.98■□□□□ 0.31
FXR1-220ENST00000491062 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
FXR1-220ENST00000491062 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
FXR1-220ENST00000491062 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
FXR1-220ENST00000491062 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
FXR1-220ENST00000491062 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
FXR1-220ENST00000491062 RBM19Q9Y4C8 960 aaKnown RBP16.94■□□□□ 0.3
FXR1-220ENST00000491062 KIF14Q15058 1648 aa16.93■□□□□ 0.3
FXR1-220ENST00000491062 NBPF8Q3BBV2 869 aa16.92■□□□□ 0.3
FXR1-220ENST00000491062 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
FXR1-220ENST00000491062 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
FXR1-220ENST00000491062 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
FXR1-220ENST00000491062 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
FXR1-220ENST00000491062 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
FXR1-220ENST00000491062 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms