RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MYH16Q9H6N6 1097 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 CCDC7Q96M83 1385 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 MSNP26038 577 aaKnown RBP14.52□□□□□ -0.08
CRNKL1-204ENST00000490910 CCDC18Q5T9S5 1454 aa14.52□□□□□ -0.09
CRNKL1-204ENST00000490910 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
CRNKL1-204ENST00000490910 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
CRNKL1-204ENST00000490910 CENPQQ7L2Z9 268 aaPredicted RBP14.51□□□□□ -0.09
CRNKL1-204ENST00000490910 PLIN1O60240 522 aa14.5□□□□□ -0.09
CRNKL1-204ENST00000490910 CC2D1BQ5T0F9 858 aaKnown RBP14.49□□□□□ -0.09
CRNKL1-204ENST00000490910 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
CRNKL1-204ENST00000490910 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
CRNKL1-204ENST00000490910 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
CRNKL1-204ENST00000490910 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
CRNKL1-204ENST00000490910 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
CRNKL1-204ENST00000490910 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
CRNKL1-204ENST00000490910 HSCBQ8IWL3 235 aa14.47□□□□□ -0.09
CRNKL1-204ENST00000490910 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
CRNKL1-204ENST00000490910 NLRP13Q86W25 1043 aa14.47□□□□□ -0.09
CRNKL1-204ENST00000490910 DNTTIP2Q5QJE6 756 aaKnown RBP14.46□□□□□ -0.09
CRNKL1-204ENST00000490910 KIF7Q2M1P5 1343 aa14.45□□□□□ -0.1
CRNKL1-204ENST00000490910 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
CRNKL1-204ENST00000490910 ROCK2O75116 1388 aaKnown RBP14.45□□□□□ -0.1
CRNKL1-204ENST00000490910 CUX2O14529 1486 aa14.45□□□□□ -0.1
CRNKL1-204ENST00000490910 PTMAP06454 111 aaKnown RBP14.44□□□□□ -0.1
CRNKL1-204ENST00000490910 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
CRNKL1-204ENST00000490910 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
CRNKL1-204ENST00000490910 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
CRNKL1-204ENST00000490910 KIF15Q9NS87 1388 aa14.43□□□□□ -0.1
CRNKL1-204ENST00000490910 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
CRNKL1-204ENST00000490910 GBP4Q96PP9 640 aa14.41□□□□□ -0.1
CRNKL1-204ENST00000490910 ARID3AQ99856 593 aa14.41□□□□□ -0.1
CRNKL1-204ENST00000490910 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
CRNKL1-204ENST00000490910 RRP9O43818 475 aaKnown RBP14.4□□□□□ -0.1
CRNKL1-204ENST00000490910 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
CRNKL1-204ENST00000490910 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
CRNKL1-204ENST00000490910 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
CRNKL1-204ENST00000490910 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
CRNKL1-204ENST00000490910 PODXL2Q9NZ53 605 aa14.37□□□□□ -0.11
CRNKL1-204ENST00000490910 PTMSP20962 102 aa14.37□□□□□ -0.11
CRNKL1-204ENST00000490910 FTSJ3Q8IY81 847 aaKnown RBP14.37□□□□□ -0.11
CRNKL1-204ENST00000490910 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
CRNKL1-204ENST00000490910 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
CRNKL1-204ENST00000490910 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
CRNKL1-204ENST00000490910 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
CRNKL1-204ENST00000490910 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
CRNKL1-204ENST00000490910 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
CRNKL1-204ENST00000490910 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
CRNKL1-204ENST00000490910 MAPK8IP3Q9UPT6 1336 aa14.35□□□□□ -0.11
CRNKL1-204ENST00000490910 ZMYND15Q9H091 742 aa14.35□□□□□ -0.11
CRNKL1-204ENST00000490910 USP47Q96K76 1375 aa14.34□□□□□ -0.11
CRNKL1-204ENST00000490910 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
CRNKL1-204ENST00000490910 MRE11P49959 708 aa14.34□□□□□ -0.11
CRNKL1-204ENST00000490910 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
CRNKL1-204ENST00000490910 CDK11BP21127 795 aaKnown RBP14.33□□□□□ -0.12
CRNKL1-204ENST00000490910 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.12
CRNKL1-204ENST00000490910 PKD2Q13563 968 aa14.32□□□□□ -0.12
CRNKL1-204ENST00000490910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.124e-7■■■□□ 17.8
CRNKL1-204ENST00000490910 CDCA8Q53HL2 280 aa14.31□□□□□ -0.12
CRNKL1-204ENST00000490910 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
CRNKL1-204ENST00000490910 TMF1P82094 1093 aa14.31□□□□□ -0.12
CRNKL1-204ENST00000490910 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
CRNKL1-204ENST00000490910 POGKQ9P215 609 aa14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 CFDP1Q9UEE9 299 aaPredicted RBP14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 TPM2P07951 284 aa14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 CDCA7LQ96GN5 454 aa14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 RWDD1Q9H446 243 aaPredicted RBP14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 CHMP5Q9NZZ3 219 aa14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
CRNKL1-204ENST00000490910 BRD4O60885 1362 aaPredicted RBP14.29□□□□□ -0.12
CRNKL1-204ENST00000490910 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
CRNKL1-204ENST00000490910 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
CRNKL1-204ENST00000490910 A0A0U1RQG5 324 aaPredicted RBP14.27□□□□□ -0.12
CRNKL1-204ENST00000490910 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
CRNKL1-204ENST00000490910 SKOR2Q2VWA4 1001 aaPredicted RBP14.26□□□□□ -0.13
CRNKL1-204ENST00000490910 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.26□□□□□ -0.13
CRNKL1-204ENST00000490910 TRAK2O60296 914 aa14.25□□□□□ -0.13
CRNKL1-204ENST00000490910 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
CRNKL1-204ENST00000490910 SKAP1Q86WV1 359 aa14.25□□□□□ -0.13
CRNKL1-204ENST00000490910 MAP7D2Q96T17 732 aa14.25□□□□□ -0.13
CRNKL1-204ENST00000490910 ESPNB1AK53 854 aa14.24□□□□□ -0.13
CRNKL1-204ENST00000490910 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
CRNKL1-204ENST00000490910 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
CRNKL1-204ENST00000490910 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
CRNKL1-204ENST00000490910 CHAF1AQ13111 956 aaPredicted RBP14.23□□□□□ -0.13
CRNKL1-204ENST00000490910 CENPJQ9HC77 1338 aaPredicted RBP14.22□□□□□ -0.13
CRNKL1-204ENST00000490910 ZBTB7CA1YPR0 619 aa14.22□□□□□ -0.13
CRNKL1-204ENST00000490910 PLCB2Q00722 1185 aa14.21□□□□□ -0.14
CRNKL1-204ENST00000490910 KIAA2012Q0VF49 1180 aa14.21□□□□□ -0.14
CRNKL1-204ENST00000490910 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.14
CRNKL1-204ENST00000490910 CFAP53Q96M91 514 aa14.2□□□□□ -0.14
CRNKL1-204ENST00000490910 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
CRNKL1-204ENST00000490910 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 MYOM3Q5VTT5 1437 aa14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 ISY1Q9ULR0 285 aaKnown RBP14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
CRNKL1-204ENST00000490910 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms