RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CUX1P39880 1505 aa19.2■□□□□ 0.66
ARHGEF39-205ENST00000490638 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF39-205ENST00000490638 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
ARHGEF39-205ENST00000490638 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
ARHGEF39-205ENST00000490638 SOX12O15370 315 aa19.18■□□□□ 0.66
ARHGEF39-205ENST00000490638 MIER1Q8N108 512 aa19.17■□□□□ 0.66
ARHGEF39-205ENST00000490638 ZNF644Q9H582 1327 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF39-205ENST00000490638 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.66
ARHGEF39-205ENST00000490638 SENP3-EIF4A1A0A087X0R7 540 aa19.13■□□□□ 0.65
ARHGEF39-205ENST00000490638 NUDCQ9Y266 331 aa19.12■□□□□ 0.65
ARHGEF39-205ENST00000490638 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
ARHGEF39-205ENST00000490638 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
ARHGEF39-205ENST00000490638 NEUROD2Q15784 382 aa19.1■□□□□ 0.65
ARHGEF39-205ENST00000490638 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
ARHGEF39-205ENST00000490638 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF39-205ENST00000490638 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
ARHGEF39-205ENST00000490638 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
ARHGEF39-205ENST00000490638 U2SURPO15042 1029 aaKnown RBP19.06■□□□□ 0.64
ARHGEF39-205ENST00000490638 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF39-205ENST00000490638 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
ARHGEF39-205ENST00000490638 ARXQ96QS3 562 aa19.05■□□□□ 0.64
ARHGEF39-205ENST00000490638 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
ARHGEF39-205ENST00000490638 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
ARHGEF39-205ENST00000490638 MAPK8IP3Q9UPT6 1336 aa19.04■□□□□ 0.64
ARHGEF39-205ENST00000490638 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
ARHGEF39-205ENST00000490638 PRXQ9BXM0 1461 aa19.04■□□□□ 0.64
ARHGEF39-205ENST00000490638 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
ARHGEF39-205ENST00000490638 FKBP8Q14318 412 aa19.03■□□□□ 0.64
ARHGEF39-205ENST00000490638 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF39-205ENST00000490638 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
ARHGEF39-205ENST00000490638 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
ARHGEF39-205ENST00000490638 MORC1Q86VD1 984 aa19■□□□□ 0.63
ARHGEF39-205ENST00000490638 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
ARHGEF39-205ENST00000490638 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
ARHGEF39-205ENST00000490638 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
ARHGEF39-205ENST00000490638 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
ARHGEF39-205ENST00000490638 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
ARHGEF39-205ENST00000490638 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
ARHGEF39-205ENST00000490638 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
ARHGEF39-205ENST00000490638 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF39-205ENST00000490638 LAS1LQ9Y4W2 734 aaKnown RBP18.97■□□□□ 0.63
ARHGEF39-205ENST00000490638 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
ARHGEF39-205ENST00000490638 KIF21BO75037 1637 aa18.96■□□□□ 0.63
ARHGEF39-205ENST00000490638 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
ARHGEF39-205ENST00000490638 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
ARHGEF39-205ENST00000490638 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
ARHGEF39-205ENST00000490638 NGDNQ8NEJ9 315 aaKnown RBP18.95■□□□□ 0.62
ARHGEF39-205ENST00000490638 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
ARHGEF39-205ENST00000490638 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF39-205ENST00000490638 RAPGEF3O95398 923 aa18.93■□□□□ 0.62
ARHGEF39-205ENST00000490638 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
ARHGEF39-205ENST00000490638 LRRC9Q6ZRR7 1453 aa18.91■□□□□ 0.62
ARHGEF39-205ENST00000490638 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
ARHGEF39-205ENST00000490638 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
ARHGEF39-205ENST00000490638 TERF2IPQ9NYB0 399 aa18.89■□□□□ 0.61
ARHGEF39-205ENST00000490638 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
ARHGEF39-205ENST00000490638 UACAQ9BZF9 1416 aa18.88■□□□□ 0.61
ARHGEF39-205ENST00000490638 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
ARHGEF39-205ENST00000490638 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF39-205ENST00000490638 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
ARHGEF39-205ENST00000490638 MYH16Q9H6N6 1097 aa18.87■□□□□ 0.61
ARHGEF39-205ENST00000490638 ANKRD50Q9ULJ7 1429 aa18.86■□□□□ 0.61
ARHGEF39-205ENST00000490638 TROQ12816 1431 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF39-205ENST00000490638 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF39-205ENST00000490638 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
ARHGEF39-205ENST00000490638 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
ARHGEF39-205ENST00000490638 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
ARHGEF39-205ENST00000490638 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
ARHGEF39-205ENST00000490638 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.61
ARHGEF39-205ENST00000490638 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF39-205ENST00000490638 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
ARHGEF39-205ENST00000490638 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF39-205ENST00000490638 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
ARHGEF39-205ENST00000490638 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF39-205ENST00000490638 DHX57Q6P158 1386 aaKnown RBP18.79■□□□□ 0.6
ARHGEF39-205ENST00000490638 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
ARHGEF39-205ENST00000490638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
ARHGEF39-205ENST00000490638 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
ARHGEF39-205ENST00000490638 NPHP1O15259 732 aa18.78■□□□□ 0.6
ARHGEF39-205ENST00000490638 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
ARHGEF39-205ENST00000490638 IQGAP2Q13576 1575 aa18.77■□□□□ 0.59
ARHGEF39-205ENST00000490638 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
ARHGEF39-205ENST00000490638 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
ARHGEF39-205ENST00000490638 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
ARHGEF39-205ENST00000490638 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF39-205ENST00000490638 AMPHP49418 695 aa18.73■□□□□ 0.59
ARHGEF39-205ENST00000490638 TXNDC2Q86VQ3 553 aa18.72■□□□□ 0.59
ARHGEF39-205ENST00000490638 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF39-205ENST00000490638 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
ARHGEF39-205ENST00000490638 CD109Q6YHK3 1445 aa18.71■□□□□ 0.59
ARHGEF39-205ENST00000490638 HSP90AA1P07900 732 aaKnown RBP18.71■□□□□ 0.59
ARHGEF39-205ENST00000490638 ANP32AP39687 249 aaKnown RBP18.71■□□□□ 0.59
ARHGEF39-205ENST00000490638 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.58
ARHGEF39-205ENST00000490638 RALBP1Q15311 655 aa18.68■□□□□ 0.58
ARHGEF39-205ENST00000490638 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
ARHGEF39-205ENST00000490638 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
ARHGEF39-205ENST00000490638 EPRSP07814 1512 aaKnown RBP18.68■□□□□ 0.58
ARHGEF39-205ENST00000490638 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
ARHGEF39-205ENST00000490638 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
ARHGEF39-205ENST00000490638 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms