RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
SNX5-214ENST00000490175 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
SNX5-214ENST00000490175 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
SNX5-214ENST00000490175 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
SNX5-214ENST00000490175 KDM6BO15054 1643 aa23.17■■□□□ 1.3
SNX5-214ENST00000490175 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
SNX5-214ENST00000490175 ZNF644Q9H582 1327 aaPredicted RBP23.17■■□□□ 1.3
SNX5-214ENST00000490175 CDC42BPAQ5VT25 1732 aa23.15■■□□□ 1.3
SNX5-214ENST00000490175 ADGBQ8N7X0 1667 aa23.15■■□□□ 1.3
SNX5-214ENST00000490175 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.3
SNX5-214ENST00000490175 PPP1R15AO75807 674 aaPredicted RBP23.14■■□□□ 1.29
SNX5-214ENST00000490175 TONSLQ96HA7 1378 aa23.14■■□□□ 1.29
SNX5-214ENST00000490175 MIER1Q8N108 512 aa23.13■■□□□ 1.29
SNX5-214ENST00000490175 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
SNX5-214ENST00000490175 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
SNX5-214ENST00000490175 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
SNX5-214ENST00000490175 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
SNX5-214ENST00000490175 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
SNX5-214ENST00000490175 NCOA1Q15788 1441 aa23.06■■□□□ 1.28
SNX5-214ENST00000490175 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
SNX5-214ENST00000490175 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
SNX5-214ENST00000490175 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
SNX5-214ENST00000490175 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
SNX5-214ENST00000490175 ZNF777Q9ULD5 760 aaPredicted RBP23.03■■□□□ 1.28
SNX5-214ENST00000490175 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
SNX5-214ENST00000490175 ARHGEF5Q12774 1597 aa23■■□□□ 1.27
SNX5-214ENST00000490175 PREX2Q70Z35 1606 aa23■■□□□ 1.27
SNX5-214ENST00000490175 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
SNX5-214ENST00000490175 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
SNX5-214ENST00000490175 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
SNX5-214ENST00000490175 C9orf84Q5VXU9 1444 aa22.95■■□□□ 1.26
SNX5-214ENST00000490175 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
SNX5-214ENST00000490175 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
SNX5-214ENST00000490175 PZPP20742 1482 aa22.91■■□□□ 1.26
SNX5-214ENST00000490175 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
SNX5-214ENST00000490175 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
SNX5-214ENST00000490175 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
SNX5-214ENST00000490175 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
SNX5-214ENST00000490175 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
SNX5-214ENST00000490175 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
SNX5-214ENST00000490175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNX5-214ENST00000490175 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
SNX5-214ENST00000490175 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.25
SNX5-214ENST00000490175 CCDC141Q6ZP82 1450 aa22.89■■□□□ 1.25
SNX5-214ENST00000490175 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
SNX5-214ENST00000490175 ZCCHC11Q5TAX3 1644 aaKnown RBP22.88■■□□□ 1.25
SNX5-214ENST00000490175 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
SNX5-214ENST00000490175 ARHGAP5Q13017 1502 aa22.84■■□□□ 1.25
SNX5-214ENST00000490175 KDM5DQ9BY66 1539 aa22.84■■□□□ 1.25
SNX5-214ENST00000490175 FOXD1Q16676 465 aa22.83■■□□□ 1.25
SNX5-214ENST00000490175 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
SNX5-214ENST00000490175 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.24
SNX5-214ENST00000490175 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.243e-7■□□□□ 11.3
SNX5-214ENST00000490175 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
SNX5-214ENST00000490175 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
SNX5-214ENST00000490175 KIF15Q9NS87 1388 aa22.8■■□□□ 1.24
SNX5-214ENST00000490175 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
SNX5-214ENST00000490175 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
SNX5-214ENST00000490175 L3MBTL2Q969R5 705 aa22.79■■□□□ 1.24
SNX5-214ENST00000490175 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
SNX5-214ENST00000490175 PLCH2O75038 1416 aa22.76■■□□□ 1.23
SNX5-214ENST00000490175 NUP155O75694 1391 aa22.73■■□□□ 1.23
SNX5-214ENST00000490175 PLXNC1O60486 1568 aa22.73■■□□□ 1.23
SNX5-214ENST00000490175 PKD2Q13563 968 aa22.72■■□□□ 1.23
SNX5-214ENST00000490175 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
SNX5-214ENST00000490175 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
SNX5-214ENST00000490175 KCNH8Q96L42 1107 aa22.7■■□□□ 1.23
SNX5-214ENST00000490175 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
SNX5-214ENST00000490175 EIF4G2P78344 907 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNX5-214ENST00000490175 ABCC1P33527 1531 aa22.66■■□□□ 1.22
SNX5-214ENST00000490175 UNC13BO14795 1591 aa22.66■■□□□ 1.22
SNX5-214ENST00000490175 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
SNX5-214ENST00000490175 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
SNX5-214ENST00000490175 ARHGEF12Q9NZN5 1544 aa22.64■■□□□ 1.22
SNX5-214ENST00000490175 DUOX2Q9NRD8 1548 aa22.63■■□□□ 1.21
SNX5-214ENST00000490175 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
SNX5-214ENST00000490175 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
SNX5-214ENST00000490175 ANP32CO43423 234 aa22.59■■□□□ 1.21
SNX5-214ENST00000490175 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
SNX5-214ENST00000490175 ABCA9Q8IUA7 1624 aa22.58■■□□□ 1.21
SNX5-214ENST00000490175 CCER2I3L3R5 266 aa22.58■■□□□ 1.2
SNX5-214ENST00000490175 OSCARQ8IYS5 282 aa22.58■■□□□ 1.2
SNX5-214ENST00000490175 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
SNX5-214ENST00000490175 UHRF1BP1Q6BDS2 1440 aa22.56■■□□□ 1.2
SNX5-214ENST00000490175 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
SNX5-214ENST00000490175 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
SNX5-214ENST00000490175 RTEL1-TNFRSF6BF6WH68 1400 aa22.55■■□□□ 1.2
SNX5-214ENST00000490175 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
SNX5-214ENST00000490175 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
SNX5-214ENST00000490175 POLR1AO95602 1720 aaPredicted RBP22.53■■□□□ 1.2
SNX5-214ENST00000490175 ASXL2Q76L83 1435 aa22.5■■□□□ 1.19
SNX5-214ENST00000490175 FANCAO15360 1455 aa22.49■■□□□ 1.19
SNX5-214ENST00000490175 ZFYVE16Q7Z3T8 1539 aa22.48■■□□□ 1.19
SNX5-214ENST00000490175 RALGAPBQ86X10 1494 aa22.48■■□□□ 1.19
SNX5-214ENST00000490175 CCDC7Q96M83 1385 aa22.48■■□□□ 1.19
SNX5-214ENST00000490175 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
SNX5-214ENST00000490175 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
SNX5-214ENST00000490175 CNTLNQ9NXG0 1405 aa22.46■■□□□ 1.19
SNX5-214ENST00000490175 ATP10AO60312 1499 aa22.45■■□□□ 1.18
SNX5-214ENST00000490175 INO80Q9ULG1 1556 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms