RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 CD109Q6YHK3 1445 aa7.46□□□□□ -1.21
RTN1-207ENST00000490111 VASPP50552 380 aaPredicted RBP7.46□□□□□ -1.22
RTN1-207ENST00000490111 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
RTN1-207ENST00000490111 RIMS1Q86UR5 1692 aaKnown RBP7.45□□□□□ -1.22
RTN1-207ENST00000490111 ZCCHC11Q5TAX3 1644 aaKnown RBP7.45□□□□□ -1.22
RTN1-207ENST00000490111 CFAP43Q8NDM7 1665 aa7.44□□□□□ -1.22
RTN1-207ENST00000490111 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
RTN1-207ENST00000490111 ARAP3Q8WWN8 1544 aa7.44□□□□□ -1.22
RTN1-207ENST00000490111 RNF216Q9NWF9 866 aaPredicted RBP7.44□□□□□ -1.22
RTN1-207ENST00000490111 IFNLR1Q8IU57 520 aaPredicted RBP7.43□□□□□ -1.22
RTN1-207ENST00000490111 YEATS2Q9ULM3 1422 aa7.43□□□□□ -1.22
RTN1-207ENST00000490111 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
RTN1-207ENST00000490111 WDR7Q9Y4E6 1490 aa7.43□□□□□ -1.22
RTN1-207ENST00000490111 SUPT5HO00267 1087 aaKnown RBP7.42□□□□□ -1.22
RTN1-207ENST00000490111 KCNH8Q96L42 1107 aa7.41□□□□□ -1.22
RTN1-207ENST00000490111 STRCQ7RTU9 1775 aa7.41□□□□□ -1.22
RTN1-207ENST00000490111 SPRYD3Q8NCJ5 442 aa7.4□□□□□ -1.22
RTN1-207ENST00000490111 BIVM-ERCC5R4GMW8 1640 aa7.4□□□□□ -1.22
RTN1-207ENST00000490111 MED1Q15648 1581 aaPredicted RBP7.39□□□□□ -1.23
RTN1-207ENST00000490111 RAPGEF3O95398 923 aa7.39□□□□□ -1.23
RTN1-207ENST00000490111 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
RTN1-207ENST00000490111 LTBP4Q8N2S1 1624 aa7.38□□□□□ -1.23
RTN1-207ENST00000490111 PTPRTO14522 1441 aa7.37□□□□□ -1.23
RTN1-207ENST00000490111 PHLDB1Q86UU1 1377 aa7.37□□□□□ -1.23
RTN1-207ENST00000490111 UBAP1LF5GYI3 381 aa7.37□□□□□ -1.23
RTN1-207ENST00000490111 PREX1Q8TCU6 1659 aa7.37□□□□□ -1.23
RTN1-207ENST00000490111 POGZQ7Z3K3 1410 aa7.35□□□□□ -1.23
RTN1-207ENST00000490111 UBTFP17480 764 aaKnown RBP7.35□□□□□ -1.23
RTN1-207ENST00000490111 PELP1Q8IZL8 1130 aaKnown RBP7.35□□□□□ -1.23
RTN1-207ENST00000490111 DISP1Q96F81 1524 aa7.34□□□□□ -1.23
RTN1-207ENST00000490111 HSPA1LP34931 641 aa7.33□□□□□ -1.24
RTN1-207ENST00000490111 PROM2Q8N271 834 aa7.33□□□□□ -1.24
RTN1-207ENST00000490111 IQGAP2Q13576 1575 aa7.33□□□□□ -1.24
RTN1-207ENST00000490111 TTC37Q6PGP7 1564 aa7.33□□□□□ -1.24
RTN1-207ENST00000490111 IGF1RP08069 1367 aa7.33□□□□□ -1.24
RTN1-207ENST00000490111 FANCAO15360 1455 aa7.32□□□□□ -1.24
RTN1-207ENST00000490111 FRMPD1Q5SYB0 1578 aa7.32□□□□□ -1.24
RTN1-207ENST00000490111 FER1L4A9Z1Z3 1794 aa7.31□□□□□ -1.24
RTN1-207ENST00000490111 HRCP23327 699 aa7.31□□□□□ -1.24
RTN1-207ENST00000490111 MLECQ14165 292 aa7.31□□□□□ -1.24
RTN1-207ENST00000490111 ARHGEF40Q8TER5 1519 aa7.31□□□□□ -1.24
RTN1-207ENST00000490111 NEO1Q92859 1461 aa7.3□□□□□ -1.24
RTN1-207ENST00000490111 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
RTN1-207ENST00000490111 CEBPAP49715 358 aaPredicted RBP7.3□□□□□ -1.24
RTN1-207ENST00000490111 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
RTN1-207ENST00000490111 AKNAQ7Z591 1439 aa7.28□□□□□ -1.24
RTN1-207ENST00000490111 SIGLEC1Q9BZZ2 1709 aa7.28□□□□□ -1.24
RTN1-207ENST00000490111 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
RTN1-207ENST00000490111 KIAA0556O60303 1618 aa7.27□□□□□ -1.25
RTN1-207ENST00000490111 ABCA9Q8IUA7 1624 aa7.27□□□□□ -1.25
RTN1-207ENST00000490111 CARMIL1Q5VZK9 1371 aa7.26□□□□□ -1.25
RTN1-207ENST00000490111 PIP4K2BP78356 416 aa7.26□□□□□ -1.25
RTN1-207ENST00000490111 MAPK8IP2Q13387 824 aaPredicted RBP7.26□□□□□ -1.25
RTN1-207ENST00000490111 UGGT2Q9NYU1 1516 aa7.26□□□□□ -1.25
RTN1-207ENST00000490111 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
RTN1-207ENST00000490111 DENND4BO75064 1496 aaPredicted RBP7.25□□□□□ -1.25
RTN1-207ENST00000490111 MYT1Q01538 1121 aa7.25□□□□□ -1.25
RTN1-207ENST00000490111 ARHGEF12Q9NZN5 1544 aa7.25□□□□□ -1.25
RTN1-207ENST00000490111 KIF27Q86VH2 1401 aa7.25□□□□□ -1.25
RTN1-207ENST00000490111 ABCA8O94911 1581 aa7.25□□□□□ -1.25
RTN1-207ENST00000490111 RICTORQ6R327 1708 aa7.24□□□□□ -1.25
RTN1-207ENST00000490111 ZFYVE16Q7Z3T8 1539 aa7.24□□□□□ -1.25
RTN1-207ENST00000490111 SPDYE4A6NLX3 237 aa7.24□□□□□ -1.25
RTN1-207ENST00000490111 RGS17Q9UGC6 210 aaPredicted RBP7.24□□□□□ -1.25
RTN1-207ENST00000490111 NCOA1Q15788 1441 aa7.24□□□□□ -1.25
RTN1-207ENST00000490111 FHOD3Q2V2M9 1422 aa7.24□□□□□ -1.25
RTN1-207ENST00000490111 EFCAB5A4FU69 1503 aa7.23□□□□□ -1.25
RTN1-207ENST00000490111 RGL2O15211 777 aa7.23□□□□□ -1.25
RTN1-207ENST00000490111 TOM1O60784 492 aa7.23□□□□□ -1.25
RTN1-207ENST00000490111 SETD1BQ9UPS6 1966 aaKnown RBP7.22□□□□□ -1.25
RTN1-207ENST00000490111 MAGI2Q86UL8 1455 aa7.22□□□□□ -1.25
RTN1-207ENST00000490111 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
RTN1-207ENST00000490111 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
RTN1-207ENST00000490111 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
RTN1-207ENST00000490111 HOXD11P31277 338 aaPredicted RBP7.2□□□□□ -1.26
RTN1-207ENST00000490111 NCKAP5LQ9HCH0 1330 aa7.2□□□□□ -1.26
RTN1-207ENST00000490111 ATP10BO94823 1461 aa7.19□□□□□ -1.26
RTN1-207ENST00000490111 CAMSAP1Q5T5Y3 1602 aa7.19□□□□□ -1.26
RTN1-207ENST00000490111 TRAPPC8Q9Y2L5 1435 aa7.18□□□□□ -1.26
RTN1-207ENST00000490111 ATP10AO60312 1499 aa7.18□□□□□ -1.26
RTN1-207ENST00000490111 HECW1Q76N89 1606 aa7.18□□□□□ -1.26
RTN1-207ENST00000490111 C3P01024 1663 aa7.17□□□□□ -1.26
RTN1-207ENST00000490111 POTEAQ6S8J7 498 aa7.17□□□□□ -1.26
RTN1-207ENST00000490111 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
RTN1-207ENST00000490111 GOLGA3Q08378 1498 aa7.17□□□□□ -1.26
RTN1-207ENST00000490111 CFAP74Q9C0B2 1584 aa7.16□□□□□ -1.26
RTN1-207ENST00000490111 FAM9AQ8IZU1 332 aaPredicted RBP7.16□□□□□ -1.26
RTN1-207ENST00000490111 SPOCK2Q92563 424 aa7.16□□□□□ -1.26
RTN1-207ENST00000490111 CHGAP10645 457 aaKnown RBP7.14□□□□□ -1.27
RTN1-207ENST00000490111 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
RTN1-207ENST00000490111 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
RTN1-207ENST00000490111 SETD1AO15047 1707 aaKnown RBP7.13□□□□□ -1.27
RTN1-207ENST00000490111 CPS1P31327 1500 aa7.13□□□□□ -1.27
RTN1-207ENST00000490111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.13□□□□□ -1.27
RTN1-207ENST00000490111 HNRNPUL2Q1KMD3 747 aaKnown RBP7.13□□□□□ -1.27
RTN1-207ENST00000490111 UPF1Q92900 1129 aaKnown RBP eCLIP7.13□□□□□ -1.27
RTN1-207ENST00000490111 RAPGEF2Q9Y4G8 1499 aa7.12□□□□□ -1.27
RTN1-207ENST00000490111 ALKQ9UM73 1620 aa7.12□□□□□ -1.27
RTN1-207ENST00000490111 PLA2R1Q13018 1463 aa7.11□□□□□ -1.27
RTN1-207ENST00000490111 SCAPERQ9BY12 1400 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms