RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 ZNF644Q9H582 1327 aaPredicted RBP21.18■□□□□ 0.98
NINJ1-204ENST00000489274 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
NINJ1-204ENST00000489274 CAMSAP2Q08AD1 1489 aa21.15■□□□□ 0.98
NINJ1-204ENST00000489274 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
NINJ1-204ENST00000489274 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
NINJ1-204ENST00000489274 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
NINJ1-204ENST00000489274 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
NINJ1-204ENST00000489274 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
NINJ1-204ENST00000489274 KDM6BO15054 1643 aa21.06■□□□□ 0.96
NINJ1-204ENST00000489274 UHRF1BP1LA0JNW5 1464 aa21.06■□□□□ 0.96
NINJ1-204ENST00000489274 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
NINJ1-204ENST00000489274 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
NINJ1-204ENST00000489274 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
NINJ1-204ENST00000489274 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
NINJ1-204ENST00000489274 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
NINJ1-204ENST00000489274 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
NINJ1-204ENST00000489274 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
NINJ1-204ENST00000489274 CROCC2H7BZ55 1655 aa21■□□□□ 0.95
NINJ1-204ENST00000489274 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
NINJ1-204ENST00000489274 SHANK2Q9UPX8 1470 aa20.99■□□□□ 0.95
NINJ1-204ENST00000489274 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
NINJ1-204ENST00000489274 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
NINJ1-204ENST00000489274 KDM5BQ9UGL1 1544 aa20.97■□□□□ 0.95
NINJ1-204ENST00000489274 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
NINJ1-204ENST00000489274 ARHGEF5Q12774 1597 aa20.95■□□□□ 0.94
NINJ1-204ENST00000489274 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
NINJ1-204ENST00000489274 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
NINJ1-204ENST00000489274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.94
NINJ1-204ENST00000489274 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
NINJ1-204ENST00000489274 TSPY4P0CV99 314 aa20.92■□□□□ 0.94
NINJ1-204ENST00000489274 TSPY10P0CW01 314 aa20.92■□□□□ 0.94
NINJ1-204ENST00000489274 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
NINJ1-204ENST00000489274 ZCCHC11Q5TAX3 1644 aaKnown RBP20.91■□□□□ 0.94
NINJ1-204ENST00000489274 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
NINJ1-204ENST00000489274 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.94
NINJ1-204ENST00000489274 TTC37Q6PGP7 1564 aa20.89■□□□□ 0.94
NINJ1-204ENST00000489274 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
NINJ1-204ENST00000489274 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
NINJ1-204ENST00000489274 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
NINJ1-204ENST00000489274 MIER1Q8N108 512 aa20.87■□□□□ 0.93
NINJ1-204ENST00000489274 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
NINJ1-204ENST00000489274 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
NINJ1-204ENST00000489274 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
NINJ1-204ENST00000489274 PZPP20742 1482 aa20.86■□□□□ 0.93
NINJ1-204ENST00000489274 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
NINJ1-204ENST00000489274 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
NINJ1-204ENST00000489274 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
NINJ1-204ENST00000489274 PLCH2O75038 1416 aa20.84■□□□□ 0.93
NINJ1-204ENST00000489274 MYO5CQ9NQX4 1742 aa20.83■□□□□ 0.93
NINJ1-204ENST00000489274 FOXD1Q16676 465 aa20.81■□□□□ 0.92
NINJ1-204ENST00000489274 KIF15Q9NS87 1388 aa20.81■□□□□ 0.92
NINJ1-204ENST00000489274 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
NINJ1-204ENST00000489274 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
NINJ1-204ENST00000489274 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
NINJ1-204ENST00000489274 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
NINJ1-204ENST00000489274 KDM5DQ9BY66 1539 aa20.77■□□□□ 0.91
NINJ1-204ENST00000489274 ARAP3Q8WWN8 1544 aa20.76■□□□□ 0.91
NINJ1-204ENST00000489274 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
NINJ1-204ENST00000489274 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
NINJ1-204ENST00000489274 NUP155O75694 1391 aa20.74■□□□□ 0.91
NINJ1-204ENST00000489274 PKD2Q13563 968 aa20.73■□□□□ 0.91
NINJ1-204ENST00000489274 ARHGEF12Q9NZN5 1544 aa20.72■□□□□ 0.91
NINJ1-204ENST00000489274 PLXNC1O60486 1568 aa20.69■□□□□ 0.9
NINJ1-204ENST00000489274 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
NINJ1-204ENST00000489274 ABCC1P33527 1531 aa20.69■□□□□ 0.9
NINJ1-204ENST00000489274 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
NINJ1-204ENST00000489274 ASXL2Q76L83 1435 aa20.65■□□□□ 0.9
NINJ1-204ENST00000489274 ABCA9Q8IUA7 1624 aa20.65■□□□□ 0.9
NINJ1-204ENST00000489274 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.89
NINJ1-204ENST00000489274 TRAPPC8Q9Y2L5 1435 aa20.63■□□□□ 0.89
NINJ1-204ENST00000489274 NPM1P06748 294 aaKnown RBP eCLIP20.62■□□□□ 0.89
NINJ1-204ENST00000489274 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
NINJ1-204ENST00000489274 RTEL1-TNFRSF6BF6WH68 1400 aa20.62■□□□□ 0.89
NINJ1-204ENST00000489274 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
NINJ1-204ENST00000489274 ERBINQ96RT1 1412 aa20.61■□□□□ 0.89
NINJ1-204ENST00000489274 UNC13BO14795 1591 aa20.61■□□□□ 0.89
NINJ1-204ENST00000489274 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
NINJ1-204ENST00000489274 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
NINJ1-204ENST00000489274 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
NINJ1-204ENST00000489274 FANCAO15360 1455 aa20.58■□□□□ 0.88
NINJ1-204ENST00000489274 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
NINJ1-204ENST00000489274 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
NINJ1-204ENST00000489274 MAGI2Q86UL8 1455 aa20.55■□□□□ 0.88
NINJ1-204ENST00000489274 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
NINJ1-204ENST00000489274 AFAP1Q8N556 730 aa20.54■□□□□ 0.88
NINJ1-204ENST00000489274 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
NINJ1-204ENST00000489274 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
NINJ1-204ENST00000489274 ZFYVE16Q7Z3T8 1539 aa20.51■□□□□ 0.87
NINJ1-204ENST00000489274 ADGRL1O94910 1474 aa20.5■□□□□ 0.87
NINJ1-204ENST00000489274 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
NINJ1-204ENST00000489274 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
NINJ1-204ENST00000489274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
NINJ1-204ENST00000489274 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
NINJ1-204ENST00000489274 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
NINJ1-204ENST00000489274 ATP10AO60312 1499 aa20.46■□□□□ 0.87
NINJ1-204ENST00000489274 PLA2R1Q13018 1463 aa20.45■□□□□ 0.86
NINJ1-204ENST00000489274 ATP7AQ04656 1500 aa20.45■□□□□ 0.86
NINJ1-204ENST00000489274 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
NINJ1-204ENST00000489274 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
NINJ1-204ENST00000489274 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms