RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 DNMT1P26358 1616 aaKnown RBP29.86■■■□□ 2.37
NECAB3-213ENST00000488489 ZNF777Q9ULD5 760 aaPredicted RBP29.86■■■□□ 2.37
NECAB3-213ENST00000488489 RRP7BPQ9NSQ0 103 aa29.84■■■□□ 2.37
NECAB3-213ENST00000488489 AKNAQ7Z591 1439 aa29.78■■■□□ 2.36
NECAB3-213ENST00000488489 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
NECAB3-213ENST00000488489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.78■■■□□ 2.362e-6■■■□□ 19
NECAB3-213ENST00000488489 TTC37Q6PGP7 1564 aa29.77■■■□□ 2.36
NECAB3-213ENST00000488489 KCNH8Q96L42 1107 aa29.77■■■□□ 2.36
NECAB3-213ENST00000488489 CDC42BPBQ9Y5S2 1711 aa29.75■■■□□ 2.35
NECAB3-213ENST00000488489 GCC2Q8IWJ2 1684 aa29.75■■■□□ 2.35
NECAB3-213ENST00000488489 PREX2Q70Z35 1606 aa29.73■■■□□ 2.35
NECAB3-213ENST00000488489 ROCK1Q13464 1354 aa29.73■■■□□ 2.35
NECAB3-213ENST00000488489 KDM6BO15054 1643 aa29.7■■■□□ 2.35
NECAB3-213ENST00000488489 CROCC2H7BZ55 1655 aa29.66■■■□□ 2.34
NECAB3-213ENST00000488489 SAMD9LQ8IVG5 1584 aa29.66■■■□□ 2.34
NECAB3-213ENST00000488489 HNRNPMP52272 730 aaKnown RBP eCLIP29.63■■■□□ 2.335e-11■■■□□ 16.7
NECAB3-213ENST00000488489 MYO5CQ9NQX4 1742 aa29.63■■■□□ 2.33
NECAB3-213ENST00000488489 MBD5Q9P267 1494 aa29.62■■■□□ 2.33
NECAB3-213ENST00000488489 NCOA1Q15788 1441 aa29.62■■■□□ 2.33
NECAB3-213ENST00000488489 ARHGAP5Q13017 1502 aa29.62■■■□□ 2.33
NECAB3-213ENST00000488489 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
NECAB3-213ENST00000488489 ADGRL2O95490 1459 aa29.59■■■□□ 2.33
NECAB3-213ENST00000488489 ADGBQ8N7X0 1667 aa29.59■■■□□ 2.33
NECAB3-213ENST00000488489 PLCH2O75038 1416 aa29.58■■■□□ 2.33
NECAB3-213ENST00000488489 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
NECAB3-213ENST00000488489 ASXL2Q76L83 1435 aa29.56■■■□□ 2.32
NECAB3-213ENST00000488489 SHANK2Q9UPX8 1470 aa29.55■■■□□ 2.32
NECAB3-213ENST00000488489 SIN3AQ96ST3 1273 aa29.54■■■□□ 2.32
NECAB3-213ENST00000488489 C9orf84Q5VXU9 1444 aa29.54■■■□□ 2.32
NECAB3-213ENST00000488489 ANKRD30AQ9BXX3 1397 aa29.53■■■□□ 2.32
NECAB3-213ENST00000488489 SYCP2Q9BX26 1530 aa29.52■■■□□ 2.32
NECAB3-213ENST00000488489 TRIM52Q96A61 297 aa29.52■■■□□ 2.32
NECAB3-213ENST00000488489 TSPY4P0CV99 314 aa29.51■■■□□ 2.32
NECAB3-213ENST00000488489 TSPY10P0CW01 314 aa29.51■■■□□ 2.32
NECAB3-213ENST00000488489 CCDC141Q6ZP82 1450 aa29.51■■■□□ 2.31
NECAB3-213ENST00000488489 NPM1P06748 294 aaKnown RBP eCLIP29.5■■■□□ 2.31
NECAB3-213ENST00000488489 DENND4BO75064 1496 aaPredicted RBP29.49■■■□□ 2.31
NECAB3-213ENST00000488489 RSPH4AQ5TD94 716 aa29.48■■■□□ 2.31
NECAB3-213ENST00000488489 KIAA1107Q9UPP5 1409 aa29.47■■■□□ 2.31
NECAB3-213ENST00000488489 EFCAB2Q5VUJ9 269 aa29.47■■■□□ 2.31
NECAB3-213ENST00000488489 ARHGEF12Q9NZN5 1544 aa29.46■■■□□ 2.31
NECAB3-213ENST00000488489 NEUROD1Q13562 356 aa29.46■■■□□ 2.31
NECAB3-213ENST00000488489 PLEKHH2Q8IVE3 1493 aa29.45■■■□□ 2.3
NECAB3-213ENST00000488489 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.3
NECAB3-213ENST00000488489 MPHOSPH9Q99550 1183 aa29.43■■■□□ 2.3
NECAB3-213ENST00000488489 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
NECAB3-213ENST00000488489 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
NECAB3-213ENST00000488489 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
NECAB3-213ENST00000488489 ARAP3Q8WWN8 1544 aa29.42■■■□□ 2.3
NECAB3-213ENST00000488489 ANKRD50Q9ULJ7 1429 aa29.41■■■□□ 2.3
NECAB3-213ENST00000488489 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
NECAB3-213ENST00000488489 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.3
NECAB3-213ENST00000488489 ABCC1P33527 1531 aa29.39■■■□□ 2.29
NECAB3-213ENST00000488489 KIF15Q9NS87 1388 aa29.38■■■□□ 2.29
NECAB3-213ENST00000488489 MAST1Q9Y2H9 1570 aa29.36■■■□□ 2.29
NECAB3-213ENST00000488489 TRAPPC8Q9Y2L5 1435 aa29.33■■■□□ 2.29
NECAB3-213ENST00000488489 FANCAO15360 1455 aa29.32■■■□□ 2.28
NECAB3-213ENST00000488489 ZNF316A6NFI3 1004 aaPredicted RBP29.32■■■□□ 2.28
NECAB3-213ENST00000488489 FOXD1Q16676 465 aa29.32■■■□□ 2.28
NECAB3-213ENST00000488489 TIMELESSQ9UNS1 1208 aa29.31■■■□□ 2.28
NECAB3-213ENST00000488489 PZPP20742 1482 aa29.31■■■□□ 2.28
NECAB3-213ENST00000488489 SLC4A1APQ9BWU0 796 aaKnown RBP29.3■■■□□ 2.28
NECAB3-213ENST00000488489 AFAP1Q8N556 730 aa29.25■■■□□ 2.27
NECAB3-213ENST00000488489 PLXNC1O60486 1568 aa29.24■■■□□ 2.27
NECAB3-213ENST00000488489 ANKRD30BQ9BXX2 1392 aa29.21■■■□□ 2.27
NECAB3-213ENST00000488489 CD109Q6YHK3 1445 aa29.21■■■□□ 2.27
NECAB3-213ENST00000488489 NUP155O75694 1391 aa29.2■■■□□ 2.27
NECAB3-213ENST00000488489 ADGRL1O94910 1474 aa29.2■■■□□ 2.26
NECAB3-213ENST00000488489 TONSLQ96HA7 1378 aa29.2■■■□□ 2.26
NECAB3-213ENST00000488489 PPP1R15AO75807 674 aaPredicted RBP29.19■■■□□ 2.26
NECAB3-213ENST00000488489 SCAPERQ9BY12 1400 aa29.18■■■□□ 2.26
NECAB3-213ENST00000488489 SPAG9O60271 1321 aaKnown RBP29.17■■■□□ 2.26
NECAB3-213ENST00000488489 KDM5DQ9BY66 1539 aa29.16■■■□□ 2.26
NECAB3-213ENST00000488489 PKD2Q13563 968 aa29.14■■■□□ 2.26
NECAB3-213ENST00000488489 DUOX2Q9NRD8 1548 aa29.14■■■□□ 2.26
NECAB3-213ENST00000488489 RTEL1-TNFRSF6BF6WH68 1400 aa29.14■■■□□ 2.26
NECAB3-213ENST00000488489 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.26
NECAB3-213ENST00000488489 ZFYVE16Q7Z3T8 1539 aa29.14■■■□□ 2.25
NECAB3-213ENST00000488489 DIEXFQ68CQ4 756 aaKnown RBP29.09■■■□□ 2.25
NECAB3-213ENST00000488489 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
NECAB3-213ENST00000488489 RPRD2Q5VT52 1461 aaKnown RBP29.08■■■□□ 2.25
NECAB3-213ENST00000488489 INO80Q9ULG1 1556 aaPredicted RBP29.07■■■□□ 2.24
NECAB3-213ENST00000488489 UNC13BO14795 1591 aa29.07■■■□□ 2.24
NECAB3-213ENST00000488489 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
NECAB3-213ENST00000488489 FAM135AQ9P2D6 1515 aa29.05■■■□□ 2.24
NECAB3-213ENST00000488489 CFAP74Q9C0B2 1584 aa29.05■■■□□ 2.24
NECAB3-213ENST00000488489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.02■■■□□ 2.242e-7■■□□□ 11.7
NECAB3-213ENST00000488489 MAP3K4Q9Y6R4 1608 aa29.01■■■□□ 2.24
NECAB3-213ENST00000488489 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
NECAB3-213ENST00000488489 ZNF518AQ6AHZ1 1483 aa29■■■□□ 2.23
NECAB3-213ENST00000488489 GLI2P10070 1586 aa29■■■□□ 2.23
NECAB3-213ENST00000488489 MAGI2Q86UL8 1455 aa28.98■■■□□ 2.23
NECAB3-213ENST00000488489 NEO1Q92859 1461 aa28.98■■■□□ 2.23
NECAB3-213ENST00000488489 POGZQ7Z3K3 1410 aa28.97■■■□□ 2.23
NECAB3-213ENST00000488489 MYT1LQ9UL68 1186 aa28.97■■■□□ 2.23
NECAB3-213ENST00000488489 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
NECAB3-213ENST00000488489 IQGAP3Q86VI3 1631 aa28.96■■■□□ 2.23
NECAB3-213ENST00000488489 TEX14Q8IWB6 1497 aa28.95■■■□□ 2.22
NECAB3-213ENST00000488489 FAM69CQ0P6D2 419 aa28.94■■■□□ 2.22
NECAB3-213ENST00000488489 DIP2BQ9P265 1576 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms