RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
RAPGEF3-211ENST00000488250 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
RAPGEF3-211ENST00000488250 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
RAPGEF3-211ENST00000488250 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.29
RAPGEF3-211ENST00000488250 KDM6BO15054 1643 aa23.13■■□□□ 1.29
RAPGEF3-211ENST00000488250 NEUROD1Q13562 356 aa23.12■■□□□ 1.29
RAPGEF3-211ENST00000488250 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
RAPGEF3-211ENST00000488250 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
RAPGEF3-211ENST00000488250 DENND4BO75064 1496 aaPredicted RBP23.08■■□□□ 1.29
RAPGEF3-211ENST00000488250 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
RAPGEF3-211ENST00000488250 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.28
RAPGEF3-211ENST00000488250 ADGBQ8N7X0 1667 aa23.08■■□□□ 1.28
RAPGEF3-211ENST00000488250 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
RAPGEF3-211ENST00000488250 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
RAPGEF3-211ENST00000488250 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
RAPGEF3-211ENST00000488250 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
RAPGEF3-211ENST00000488250 SHANK2Q9UPX8 1470 aa23.03■■□□□ 1.28
RAPGEF3-211ENST00000488250 MIER1Q8N108 512 aa23■■□□□ 1.27
RAPGEF3-211ENST00000488250 TRIM52Q96A61 297 aa23■■□□□ 1.27
RAPGEF3-211ENST00000488250 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
RAPGEF3-211ENST00000488250 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
RAPGEF3-211ENST00000488250 ARHGEF5Q12774 1597 aa22.98■■□□□ 1.27
RAPGEF3-211ENST00000488250 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
RAPGEF3-211ENST00000488250 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
RAPGEF3-211ENST00000488250 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
RAPGEF3-211ENST00000488250 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
RAPGEF3-211ENST00000488250 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
RAPGEF3-211ENST00000488250 CDC42BPBQ9Y5S2 1711 aa22.93■■□□□ 1.26
RAPGEF3-211ENST00000488250 MBD5Q9P267 1494 aa22.91■■□□□ 1.26
RAPGEF3-211ENST00000488250 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
RAPGEF3-211ENST00000488250 ANKRD30BQ9BXX2 1392 aa22.9■■□□□ 1.26
RAPGEF3-211ENST00000488250 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.26
RAPGEF3-211ENST00000488250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.89■■□□□ 1.26
RAPGEF3-211ENST00000488250 PZPP20742 1482 aa22.88■■□□□ 1.25
RAPGEF3-211ENST00000488250 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
RAPGEF3-211ENST00000488250 RSPH4AQ5TD94 716 aa22.88■■□□□ 1.25
RAPGEF3-211ENST00000488250 TTC37Q6PGP7 1564 aa22.87■■□□□ 1.25
RAPGEF3-211ENST00000488250 ZCCHC11Q5TAX3 1644 aaKnown RBP22.87■■□□□ 1.25
RAPGEF3-211ENST00000488250 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
RAPGEF3-211ENST00000488250 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
RAPGEF3-211ENST00000488250 TSPY4P0CV99 314 aa22.84■■□□□ 1.25
RAPGEF3-211ENST00000488250 TSPY10P0CW01 314 aa22.84■■□□□ 1.25
RAPGEF3-211ENST00000488250 RPRD2Q5VT52 1461 aaKnown RBP22.84■■□□□ 1.25
RAPGEF3-211ENST00000488250 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
RAPGEF3-211ENST00000488250 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
RAPGEF3-211ENST00000488250 PLEKHH2Q8IVE3 1493 aa22.81■■□□□ 1.24
RAPGEF3-211ENST00000488250 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
RAPGEF3-211ENST00000488250 KIAA1107Q9UPP5 1409 aa22.8■■□□□ 1.24
RAPGEF3-211ENST00000488250 KDM5DQ9BY66 1539 aa22.8■■□□□ 1.24
RAPGEF3-211ENST00000488250 ARHGAP5Q13017 1502 aa22.8■■□□□ 1.24
RAPGEF3-211ENST00000488250 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.24
RAPGEF3-211ENST00000488250 FOXD1Q16676 465 aa22.77■■□□□ 1.24
RAPGEF3-211ENST00000488250 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
RAPGEF3-211ENST00000488250 SYCP2Q9BX26 1530 aa22.76■■□□□ 1.23
RAPGEF3-211ENST00000488250 PLCH2O75038 1416 aa22.76■■□□□ 1.23
RAPGEF3-211ENST00000488250 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
RAPGEF3-211ENST00000488250 L3MBTL2Q969R5 705 aa22.73■■□□□ 1.23
RAPGEF3-211ENST00000488250 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
RAPGEF3-211ENST00000488250 PLXNC1O60486 1568 aa22.7■■□□□ 1.22
RAPGEF3-211ENST00000488250 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
RAPGEF3-211ENST00000488250 NUP155O75694 1391 aa22.69■■□□□ 1.22
RAPGEF3-211ENST00000488250 KCNH8Q96L42 1107 aa22.68■■□□□ 1.22
RAPGEF3-211ENST00000488250 PKD2Q13563 968 aa22.67■■□□□ 1.22
RAPGEF3-211ENST00000488250 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
RAPGEF3-211ENST00000488250 ARHGEF12Q9NZN5 1544 aa22.65■■□□□ 1.22
RAPGEF3-211ENST00000488250 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
RAPGEF3-211ENST00000488250 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
RAPGEF3-211ENST00000488250 ABCC1P33527 1531 aa22.65■■□□□ 1.22
RAPGEF3-211ENST00000488250 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
RAPGEF3-211ENST00000488250 UNC13BO14795 1591 aa22.63■■□□□ 1.21
RAPGEF3-211ENST00000488250 HIRIP3Q9BW71 556 aaPredicted RBP22.62■■□□□ 1.21
RAPGEF3-211ENST00000488250 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
RAPGEF3-211ENST00000488250 FAM135AQ9P2D6 1515 aa22.59■■□□□ 1.21
RAPGEF3-211ENST00000488250 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
RAPGEF3-211ENST00000488250 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
RAPGEF3-211ENST00000488250 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
RAPGEF3-211ENST00000488250 EIF4G2P78344 907 aaKnown RBP eCLIP22.59■■□□□ 1.21
RAPGEF3-211ENST00000488250 ABCA9Q8IUA7 1624 aa22.58■■□□□ 1.21
RAPGEF3-211ENST00000488250 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
RAPGEF3-211ENST00000488250 ERBINQ96RT1 1412 aa22.57■■□□□ 1.2
RAPGEF3-211ENST00000488250 NBPF8Q3BBV2 869 aa22.57■■□□□ 1.2
RAPGEF3-211ENST00000488250 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
RAPGEF3-211ENST00000488250 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
RAPGEF3-211ENST00000488250 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
RAPGEF3-211ENST00000488250 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
RAPGEF3-211ENST00000488250 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
RAPGEF3-211ENST00000488250 UHRF1BP1Q6BDS2 1440 aa22.52■■□□□ 1.2
RAPGEF3-211ENST00000488250 SPATA31E1Q6ZUB1 1445 aa22.51■■□□□ 1.19
RAPGEF3-211ENST00000488250 ASXL2Q76L83 1435 aa22.51■■□□□ 1.19
RAPGEF3-211ENST00000488250 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
RAPGEF3-211ENST00000488250 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
RAPGEF3-211ENST00000488250 FANCAO15360 1455 aa22.47■■□□□ 1.19
RAPGEF3-211ENST00000488250 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
RAPGEF3-211ENST00000488250 ANP32CO43423 234 aa22.45■■□□□ 1.18
RAPGEF3-211ENST00000488250 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
RAPGEF3-211ENST00000488250 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
RAPGEF3-211ENST00000488250 ATP10AO60312 1499 aa22.44■■□□□ 1.18
RAPGEF3-211ENST00000488250 INO80Q9ULG1 1556 aaPredicted RBP22.42■■□□□ 1.18
RAPGEF3-211ENST00000488250 RALGAPBQ86X10 1494 aa22.42■■□□□ 1.18
RAPGEF3-211ENST00000488250 POLR1AO95602 1720 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms