RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CDC42BPAQ5VT25 1732 aa29.94■■■□□ 2.38
PHF1-209ENST00000487667 GCC2Q8IWJ2 1684 aa29.92■■■□□ 2.38
PHF1-209ENST00000487667 ZCCHC11Q5TAX3 1644 aaKnown RBP29.91■■■□□ 2.38
PHF1-209ENST00000487667 RIMBP3CA6NJZ7 1639 aa29.9■■■□□ 2.38
PHF1-209ENST00000487667 RIMBP3BA6NNM3 1639 aa29.9■■■□□ 2.38
PHF1-209ENST00000487667 RIMBP3Q9UFD9 1639 aa29.9■■■□□ 2.38
PHF1-209ENST00000487667 ABCC5O15440 1437 aa29.89■■■□□ 2.38
PHF1-209ENST00000487667 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
PHF1-209ENST00000487667 PREX2Q70Z35 1606 aa29.84■■■□□ 2.37
PHF1-209ENST00000487667 ZNF644Q9H582 1327 aaPredicted RBP29.83■■■□□ 2.37
PHF1-209ENST00000487667 NPM1P06748 294 aaKnown RBP eCLIP29.8■■■□□ 2.36
PHF1-209ENST00000487667 CHIC2Q9UKJ5 165 aa29.8■■■□□ 2.36
PHF1-209ENST00000487667 MAPKBP1O60336 1514 aa29.8■■■□□ 2.36
PHF1-209ENST00000487667 SHANK2Q9UPX8 1470 aa29.79■■■□□ 2.36
PHF1-209ENST00000487667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.79■■■□□ 2.362e-7■■■■□ 20
PHF1-209ENST00000487667 CROCC2H7BZ55 1655 aa29.79■■■□□ 2.36
PHF1-209ENST00000487667 RSPH4AQ5TD94 716 aa29.79■■■□□ 2.36
PHF1-209ENST00000487667 ZNF777Q9ULD5 760 aaPredicted RBP29.79■■■□□ 2.36
PHF1-209ENST00000487667 ADGBQ8N7X0 1667 aa29.78■■■□□ 2.36
PHF1-209ENST00000487667 RRP7BPQ9NSQ0 103 aa29.77■■■□□ 2.36
PHF1-209ENST00000487667 ADGRL2O95490 1459 aa29.77■■■□□ 2.36
PHF1-209ENST00000487667 ARHGEF5Q12774 1597 aa29.76■■■□□ 2.36
PHF1-209ENST00000487667 MYO5CQ9NQX4 1742 aa29.75■■■□□ 2.35
PHF1-209ENST00000487667 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
PHF1-209ENST00000487667 PLEKHH2Q8IVE3 1493 aa29.74■■■□□ 2.35
PHF1-209ENST00000487667 TTC37Q6PGP7 1564 aa29.74■■■□□ 2.35
PHF1-209ENST00000487667 KCNH8Q96L42 1107 aa29.73■■■□□ 2.35
PHF1-209ENST00000487667 ANKRD30AQ9BXX3 1397 aa29.71■■■□□ 2.35
PHF1-209ENST00000487667 TIMELESSQ9UNS1 1208 aa29.71■■■□□ 2.35
PHF1-209ENST00000487667 NCOA1Q15788 1441 aa29.7■■■□□ 2.34
PHF1-209ENST00000487667 ARHGAP5Q13017 1502 aa29.69■■■□□ 2.34
PHF1-209ENST00000487667 WDR7Q9Y4E6 1490 aa29.69■■■□□ 2.34
PHF1-209ENST00000487667 ARAP3Q8WWN8 1544 aa29.68■■■□□ 2.34
PHF1-209ENST00000487667 TSPY4P0CV99 314 aa29.67■■■□□ 2.34
PHF1-209ENST00000487667 TSPY10P0CW01 314 aa29.67■■■□□ 2.34
PHF1-209ENST00000487667 SAMD9LQ8IVG5 1584 aa29.67■■■□□ 2.34
PHF1-209ENST00000487667 PLCH2O75038 1416 aa29.67■■■□□ 2.34
PHF1-209ENST00000487667 KIAA1107Q9UPP5 1409 aa29.67■■■□□ 2.34
PHF1-209ENST00000487667 CCDC141Q6ZP82 1450 aa29.65■■■□□ 2.34
PHF1-209ENST00000487667 MBD5Q9P267 1494 aa29.64■■■□□ 2.34
PHF1-209ENST00000487667 C9orf84Q5VXU9 1444 aa29.63■■■□□ 2.33
PHF1-209ENST00000487667 ASXL2Q76L83 1435 aa29.62■■■□□ 2.33
PHF1-209ENST00000487667 EFCAB2Q5VUJ9 269 aa29.61■■■□□ 2.33
PHF1-209ENST00000487667 TRIM52Q96A61 297 aa29.57■■■□□ 2.32
PHF1-209ENST00000487667 KDM6BO15054 1643 aa29.57■■■□□ 2.32
PHF1-209ENST00000487667 MAST1Q9Y2H9 1570 aa29.56■■■□□ 2.32
PHF1-209ENST00000487667 HNRNPMP52272 730 aaKnown RBP eCLIP29.55■■■□□ 2.32
PHF1-209ENST00000487667 ABCA9Q8IUA7 1624 aa29.54■■■□□ 2.32
PHF1-209ENST00000487667 SYCP2Q9BX26 1530 aa29.53■■■□□ 2.32
PHF1-209ENST00000487667 ZNF316A6NFI3 1004 aaPredicted RBP29.51■■■□□ 2.32
PHF1-209ENST00000487667 ANKRD50Q9ULJ7 1429 aa29.51■■■□□ 2.31
PHF1-209ENST00000487667 MPHOSPH9Q99550 1183 aa29.49■■■□□ 2.31
PHF1-209ENST00000487667 ABCC1P33527 1531 aa29.47■■■□□ 2.31
PHF1-209ENST00000487667 KIF15Q9NS87 1388 aa29.45■■■□□ 2.3
PHF1-209ENST00000487667 SIN3AQ96ST3 1273 aa29.44■■■□□ 2.3
PHF1-209ENST00000487667 NEUROD1Q13562 356 aa29.43■■■□□ 2.3
PHF1-209ENST00000487667 PLXNC1O60486 1568 aa29.43■■■□□ 2.3
PHF1-209ENST00000487667 TONSLQ96HA7 1378 aa29.39■■■□□ 2.3
PHF1-209ENST00000487667 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
PHF1-209ENST00000487667 FANCAO15360 1455 aa29.37■■■□□ 2.29
PHF1-209ENST00000487667 SLC4A1APQ9BWU0 796 aaKnown RBP29.37■■■□□ 2.29
PHF1-209ENST00000487667 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
PHF1-209ENST00000487667 KDM5DQ9BY66 1539 aa29.36■■■□□ 2.29
PHF1-209ENST00000487667 RTEL1-TNFRSF6BF6WH68 1400 aa29.35■■■□□ 2.29
PHF1-209ENST00000487667 PZPP20742 1482 aa29.34■■■□□ 2.29
PHF1-209ENST00000487667 CFAP74Q9C0B2 1584 aa29.32■■■□□ 2.28
PHF1-209ENST00000487667 DUOX2Q9NRD8 1548 aa29.32■■■□□ 2.28
PHF1-209ENST00000487667 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
PHF1-209ENST00000487667 ANKRD30BQ9BXX2 1392 aa29.29■■■□□ 2.28
PHF1-209ENST00000487667 CD109Q6YHK3 1445 aa29.28■■■□□ 2.28
PHF1-209ENST00000487667 ERBINQ96RT1 1412 aa29.28■■■□□ 2.28
PHF1-209ENST00000487667 NUP155O75694 1391 aa29.27■■■□□ 2.28
PHF1-209ENST00000487667 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.28
PHF1-209ENST00000487667 FAM69CQ0P6D2 419 aa29.26■■■□□ 2.27
PHF1-209ENST00000487667 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
PHF1-209ENST00000487667 DIEXFQ68CQ4 756 aaKnown RBP29.24■■■□□ 2.27
PHF1-209ENST00000487667 SPAG9O60271 1321 aaKnown RBP29.24■■■□□ 2.27
PHF1-209ENST00000487667 RPRD2Q5VT52 1461 aaKnown RBP29.22■■■□□ 2.27
PHF1-209ENST00000487667 UNC13BO14795 1591 aa29.21■■■□□ 2.27
PHF1-209ENST00000487667 SCAPERQ9BY12 1400 aa29.2■■■□□ 2.26
PHF1-209ENST00000487667 ZFYVE16Q7Z3T8 1539 aa29.19■■■□□ 2.26
PHF1-209ENST00000487667 GLI2P10070 1586 aa29.18■■■□□ 2.26
PHF1-209ENST00000487667 PKD2Q13563 968 aa29.16■■■□□ 2.26
PHF1-209ENST00000487667 DIP2BQ9P265 1576 aa29.16■■■□□ 2.26
PHF1-209ENST00000487667 INO80Q9ULG1 1556 aaPredicted RBP29.15■■■□□ 2.26
PHF1-209ENST00000487667 NEO1Q92859 1461 aa29.15■■■□□ 2.26
PHF1-209ENST00000487667 ZNF518AQ6AHZ1 1483 aa29.14■■■□□ 2.26
PHF1-209ENST00000487667 ATP7AQ04656 1500 aa29.14■■■□□ 2.26
PHF1-209ENST00000487667 AFAP1Q8N556 730 aa29.14■■■□□ 2.25
PHF1-209ENST00000487667 FAM135AQ9P2D6 1515 aa29.13■■■□□ 2.25
PHF1-209ENST00000487667 MAGI2Q86UL8 1455 aa29.12■■■□□ 2.25
PHF1-209ENST00000487667 FOXD1Q16676 465 aa29.12■■■□□ 2.25
PHF1-209ENST00000487667 MAP3K4Q9Y6R4 1608 aa29.11■■■□□ 2.25
PHF1-209ENST00000487667 IQGAP3Q86VI3 1631 aa29.1■■■□□ 2.25
PHF1-209ENST00000487667 POGZQ7Z3K3 1410 aa29.04■■■□□ 2.24
PHF1-209ENST00000487667 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
PHF1-209ENST00000487667 KDM5CP41229 1560 aa29.03■■■□□ 2.24
PHF1-209ENST00000487667 TEX14Q8IWB6 1497 aa29.02■■■□□ 2.24
PHF1-209ENST00000487667 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
PHF1-209ENST00000487667 DHX29Q7Z478 1369 aaKnown RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms