RNA–Protein interactions for RNA: ENST00000487279.6

IFFO1-209, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 2,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-209ENST00000487279 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.16
IFFO1-209ENST00000487279 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
IFFO1-209ENST00000487279 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
IFFO1-209ENST00000487279 RRP7BPQ9NSQ0 103 aa22.3■■□□□ 1.16
IFFO1-209ENST00000487279 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
IFFO1-209ENST00000487279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
IFFO1-209ENST00000487279 CHIC2Q9UKJ5 165 aa22.29■■□□□ 1.16
IFFO1-209ENST00000487279 NAIPQ13075 1403 aa22.29■■□□□ 1.16
IFFO1-209ENST00000487279 CCDC7Q96M83 1385 aa22.29■■□□□ 1.16
IFFO1-209ENST00000487279 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
IFFO1-209ENST00000487279 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
IFFO1-209ENST00000487279 FOXD1Q16676 465 aa22.27■■□□□ 1.16
IFFO1-209ENST00000487279 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
IFFO1-209ENST00000487279 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
IFFO1-209ENST00000487279 NEFMP07197 916 aa22.25■■□□□ 1.15
IFFO1-209ENST00000487279 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
IFFO1-209ENST00000487279 NUDCQ9Y266 331 aa22.23■■□□□ 1.15
IFFO1-209ENST00000487279 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
IFFO1-209ENST00000487279 NCOA1Q15788 1441 aa22.21■■□□□ 1.15
IFFO1-209ENST00000487279 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
IFFO1-209ENST00000487279 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
IFFO1-209ENST00000487279 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
IFFO1-209ENST00000487279 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
IFFO1-209ENST00000487279 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
IFFO1-209ENST00000487279 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
IFFO1-209ENST00000487279 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
IFFO1-209ENST00000487279 SUPT6HQ7KZ85 1726 aaKnown RBP22.16■■□□□ 1.14
IFFO1-209ENST00000487279 IQGAP2Q13576 1575 aa22.16■■□□□ 1.14
IFFO1-209ENST00000487279 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
IFFO1-209ENST00000487279 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
IFFO1-209ENST00000487279 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
IFFO1-209ENST00000487279 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
IFFO1-209ENST00000487279 BRPF3Q9ULD4 1205 aa22.1■■□□□ 1.13
IFFO1-209ENST00000487279 UGGT2Q9NYU1 1516 aa22.1■■□□□ 1.13
IFFO1-209ENST00000487279 PDE4AP27815 886 aa22.09■■□□□ 1.13
IFFO1-209ENST00000487279 EXOC6Q8TAG9 804 aa22.08■■□□□ 1.13
IFFO1-209ENST00000487279 EPRSP07814 1512 aaKnown RBP22.08■■□□□ 1.13
IFFO1-209ENST00000487279 THOC2Q8NI27 1593 aaKnown RBP22.07■■□□□ 1.12
IFFO1-209ENST00000487279 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
IFFO1-209ENST00000487279 FBLN2P98095 1184 aa22.05■■□□□ 1.12
IFFO1-209ENST00000487279 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
IFFO1-209ENST00000487279 KDM6BO15054 1643 aa22.04■■□□□ 1.12
IFFO1-209ENST00000487279 SKAP1Q86WV1 359 aa22.04■■□□□ 1.12
IFFO1-209ENST00000487279 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
IFFO1-209ENST00000487279 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
IFFO1-209ENST00000487279 WDR62O43379 1518 aa22.02■■□□□ 1.12
IFFO1-209ENST00000487279 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
IFFO1-209ENST00000487279 EIF5BO60841 1220 aaKnown RBP22.01■■□□□ 1.11
IFFO1-209ENST00000487279 BACH2Q9BYV9 841 aa22■■□□□ 1.11
IFFO1-209ENST00000487279 TCERG1O14776 1098 aaKnown RBP22■■□□□ 1.11
IFFO1-209ENST00000487279 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
IFFO1-209ENST00000487279 DHX29Q7Z478 1369 aaKnown RBP21.99■■□□□ 1.11
IFFO1-209ENST00000487279 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
IFFO1-209ENST00000487279 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
IFFO1-209ENST00000487279 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
IFFO1-209ENST00000487279 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
IFFO1-209ENST00000487279 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
IFFO1-209ENST00000487279 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
IFFO1-209ENST00000487279 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
IFFO1-209ENST00000487279 SLC4A3P48751 1232 aa21.97■■□□□ 1.11
IFFO1-209ENST00000487279 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
IFFO1-209ENST00000487279 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
IFFO1-209ENST00000487279 GSE1Q14687 1217 aa21.93■■□□□ 1.1
IFFO1-209ENST00000487279 KIAA0556O60303 1618 aa21.93■■□□□ 1.1
IFFO1-209ENST00000487279 UBE2Q2Q8WVN8 375 aa21.93■■□□□ 1.1
IFFO1-209ENST00000487279 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
IFFO1-209ENST00000487279 TCOF1Q13428 1488 aaKnown RBP21.91■■□□□ 1.1
IFFO1-209ENST00000487279 RCAN3Q9UKA8 241 aa21.9■■□□□ 1.1
IFFO1-209ENST00000487279 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
IFFO1-209ENST00000487279 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.1
IFFO1-209ENST00000487279 NFKBIBQ15653 356 aa21.89■■□□□ 1.09
IFFO1-209ENST00000487279 FRAT1Q92837 279 aaPredicted RBP21.89■■□□□ 1.09
IFFO1-209ENST00000487279 ANKRD30BQ9BXX2 1392 aa21.89■■□□□ 1.09
IFFO1-209ENST00000487279 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
IFFO1-209ENST00000487279 PLIN1O60240 522 aa21.87■■□□□ 1.09
IFFO1-209ENST00000487279 GCC2Q8IWJ2 1684 aa21.87■■□□□ 1.09
IFFO1-209ENST00000487279 TEX14Q8IWB6 1497 aa21.87■■□□□ 1.09
IFFO1-209ENST00000487279 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
IFFO1-209ENST00000487279 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
IFFO1-209ENST00000487279 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
IFFO1-209ENST00000487279 MS4A1P11836 297 aa21.84■■□□□ 1.09
IFFO1-209ENST00000487279 PRG4Q92954 1404 aaPredicted RBP21.84■■□□□ 1.09
IFFO1-209ENST00000487279 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
IFFO1-209ENST00000487279 CEP170Q5SW79 1584 aa21.83■■□□□ 1.09
IFFO1-209ENST00000487279 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.09
IFFO1-209ENST00000487279 USP47Q96K76 1375 aa21.83■■□□□ 1.08
IFFO1-209ENST00000487279 POLR1AO95602 1720 aaPredicted RBP21.83■■□□□ 1.08
IFFO1-209ENST00000487279 BCORL1Q5H9F3 1711 aa21.82■■□□□ 1.08
IFFO1-209ENST00000487279 CDCA7LQ96GN5 454 aa21.81■■□□□ 1.08
IFFO1-209ENST00000487279 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
IFFO1-209ENST00000487279 DAPK1P53355 1430 aa21.8■■□□□ 1.08
IFFO1-209ENST00000487279 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
IFFO1-209ENST00000487279 ABCC5O15440 1437 aa21.78■■□□□ 1.08
IFFO1-209ENST00000487279 DAXXQ9UER7 740 aaPredicted RBP21.76■■□□□ 1.07
IFFO1-209ENST00000487279 CRBNQ96SW2 442 aa21.75■■□□□ 1.07
IFFO1-209ENST00000487279 LRPPRCP42704 1394 aaKnown RBP21.75■■□□□ 1.07
IFFO1-209ENST00000487279 KIF14Q15058 1648 aa21.75■■□□□ 1.07
IFFO1-209ENST00000487279 FRAT2O75474 233 aaPredicted RBP21.72■■□□□ 1.07
IFFO1-209ENST00000487279 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
IFFO1-209ENST00000487279 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms