RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 GPATCH8Q9UKJ3 1502 aaKnown RBP32.77■■■□□ 2.84
LRRC1-203ENST00000487251 PTPRGP23470 1445 aa32.77■■■□□ 2.84
LRRC1-203ENST00000487251 AKNAQ7Z591 1439 aa32.76■■■□□ 2.84
LRRC1-203ENST00000487251 CAMSAP2Q08AD1 1489 aa32.74■■■□□ 2.83
LRRC1-203ENST00000487251 CFDP1Q9UEE9 299 aaPredicted RBP32.74■■■□□ 2.83
LRRC1-203ENST00000487251 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
LRRC1-203ENST00000487251 ERCC6L2Q5T890 1561 aa32.73■■■□□ 2.83
LRRC1-203ENST00000487251 ZNF777Q9ULD5 760 aaPredicted RBP32.72■■■□□ 2.83
LRRC1-203ENST00000487251 PLEKHD1A6NEE1 506 aa32.71■■■□□ 2.83
LRRC1-203ENST00000487251 TRIM52Q96A61 297 aa32.71■■■□□ 2.83
LRRC1-203ENST00000487251 CDC42BPAQ5VT25 1732 aa32.69■■■□□ 2.82
LRRC1-203ENST00000487251 DENND4BO75064 1496 aaPredicted RBP32.69■■■□□ 2.82
LRRC1-203ENST00000487251 MYT1Q01538 1121 aa32.64■■■□□ 2.82
LRRC1-203ENST00000487251 TIMELESSQ9UNS1 1208 aa32.64■■■□□ 2.82
LRRC1-203ENST00000487251 ROCK1Q13464 1354 aa32.63■■■□□ 2.81
LRRC1-203ENST00000487251 PPP1R15AO75807 674 aaPredicted RBP32.63■■■□□ 2.81
LRRC1-203ENST00000487251 ABCC10Q5T3U5 1492 aa32.63■■■□□ 2.81
LRRC1-203ENST00000487251 TONSLQ96HA7 1378 aa32.61■■■□□ 2.81
LRRC1-203ENST00000487251 CROCC2H7BZ55 1655 aa32.57■■■□□ 2.8
LRRC1-203ENST00000487251 MPHOSPH9Q99550 1183 aa32.55■■■□□ 2.8
LRRC1-203ENST00000487251 ADGBQ8N7X0 1667 aa32.55■■■□□ 2.8
LRRC1-203ENST00000487251 FOXD1Q16676 465 aa32.55■■■□□ 2.8
LRRC1-203ENST00000487251 YTHDC1Q96MU7 727 aaKnown RBP32.55■■■□□ 2.8
LRRC1-203ENST00000487251 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.8
LRRC1-203ENST00000487251 HIRIP3Q9BW71 556 aaPredicted RBP32.49■■■□□ 2.79
LRRC1-203ENST00000487251 NCOA1Q15788 1441 aa32.48■■■□□ 2.79
LRRC1-203ENST00000487251 KDM5BQ9UGL1 1544 aa32.47■■■□□ 2.79
LRRC1-203ENST00000487251 CDC42BPBQ9Y5S2 1711 aa32.44■■■□□ 2.78
LRRC1-203ENST00000487251 ABCC2Q92887 1545 aa32.43■■■□□ 2.78
LRRC1-203ENST00000487251 ADGRL2O95490 1459 aa32.42■■■□□ 2.78
LRRC1-203ENST00000487251 HNRNPMP52272 730 aaKnown RBP eCLIP32.38■■■□□ 2.776e-7■■■■■ 28.6
LRRC1-203ENST00000487251 PREX2Q70Z35 1606 aa32.38■■■□□ 2.77
LRRC1-203ENST00000487251 TTC37Q6PGP7 1564 aa32.37■■■□□ 2.77
LRRC1-203ENST00000487251 SLC4A1APQ9BWU0 796 aaKnown RBP32.36■■■□□ 2.77
LRRC1-203ENST00000487251 ANKRD30AQ9BXX3 1397 aa32.35■■■□□ 2.77
LRRC1-203ENST00000487251 SAMD9LQ8IVG5 1584 aa32.35■■■□□ 2.77
LRRC1-203ENST00000487251 C9orf84Q5VXU9 1444 aa32.34■■■□□ 2.77
LRRC1-203ENST00000487251 PZPP20742 1482 aa32.33■■■□□ 2.77
LRRC1-203ENST00000487251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.32■■■□□ 2.76
LRRC1-203ENST00000487251 ANKRD30BQ9BXX2 1392 aa32.32■■■□□ 2.76
LRRC1-203ENST00000487251 ZCCHC11Q5TAX3 1644 aaKnown RBP32.29■■■□□ 2.76
LRRC1-203ENST00000487251 DDX10Q13206 875 aaKnown RBP32.29■■■□□ 2.76
LRRC1-203ENST00000487251 SHANK2Q9UPX8 1470 aa32.29■■■□□ 2.76
LRRC1-203ENST00000487251 MBD5Q9P267 1494 aa32.29■■■□□ 2.76
LRRC1-203ENST00000487251 KCNH8Q96L42 1107 aa32.28■■■□□ 2.76
LRRC1-203ENST00000487251 ANKRD50Q9ULJ7 1429 aa32.28■■■□□ 2.76
LRRC1-203ENST00000487251 ARHGEF5Q12774 1597 aa32.26■■■□□ 2.75
LRRC1-203ENST00000487251 TSPY4P0CV99 314 aa32.25■■■□□ 2.75
LRRC1-203ENST00000487251 TSPY10P0CW01 314 aa32.25■■■□□ 2.75
LRRC1-203ENST00000487251 L3MBTL2Q969R5 705 aa32.24■■■□□ 2.75
LRRC1-203ENST00000487251 ARHGAP5Q13017 1502 aa32.24■■■□□ 2.75
LRRC1-203ENST00000487251 MYO5CQ9NQX4 1742 aa32.22■■■□□ 2.75
LRRC1-203ENST00000487251 RPRD2Q5VT52 1461 aaKnown RBP32.22■■■□□ 2.75
LRRC1-203ENST00000487251 SYCP2Q9BX26 1530 aa32.21■■■□□ 2.75
LRRC1-203ENST00000487251 CCDC141Q6ZP82 1450 aa32.19■■■□□ 2.74
LRRC1-203ENST00000487251 KIF15Q9NS87 1388 aa32.17■■■□□ 2.74
LRRC1-203ENST00000487251 UHRF1BP1LA0JNW5 1464 aa32.17■■■□□ 2.74
LRRC1-203ENST00000487251 PKD2Q13563 968 aa32.14■■■□□ 2.74
LRRC1-203ENST00000487251 TEX14Q8IWB6 1497 aa32.14■■■□□ 2.74
LRRC1-203ENST00000487251 KIAA1107Q9UPP5 1409 aa32.12■■■□□ 2.73
LRRC1-203ENST00000487251 NUP155O75694 1391 aa32.11■■■□□ 2.73
LRRC1-203ENST00000487251 NBPF8Q3BBV2 869 aa32.06■■■□□ 2.72
LRRC1-203ENST00000487251 HSPA5P11021 654 aaKnown RBP32.05■■■□□ 2.72
LRRC1-203ENST00000487251 ARHGEF12Q9NZN5 1544 aa32.05■■■□□ 2.72
LRRC1-203ENST00000487251 RSPH4AQ5TD94 716 aa32.02■■■□□ 2.72
LRRC1-203ENST00000487251 PLCH2O75038 1416 aa32.01■■■□□ 2.71
LRRC1-203ENST00000487251 KDM5DQ9BY66 1539 aa32■■■□□ 2.71
LRRC1-203ENST00000487251 MAST1Q9Y2H9 1570 aa31.99■■■□□ 2.71
LRRC1-203ENST00000487251 PLEKHH2Q8IVE3 1493 aa31.95■■■□□ 2.7
LRRC1-203ENST00000487251 EIF4G2P78344 907 aaKnown RBP eCLIP31.94■■■□□ 2.7
LRRC1-203ENST00000487251 EFCAB2Q5VUJ9 269 aa31.92■■■□□ 2.7
LRRC1-203ENST00000487251 ABCC1P33527 1531 aa31.91■■■□□ 2.7
LRRC1-203ENST00000487251 FAM135AQ9P2D6 1515 aa31.9■■■□□ 2.7
LRRC1-203ENST00000487251 PLXNC1O60486 1568 aa31.9■■■□□ 2.7
LRRC1-203ENST00000487251 WASHC2AQ641Q2 1341 aa31.89■■■□□ 2.7
LRRC1-203ENST00000487251 WDR7Q9Y4E6 1490 aa31.88■■■□□ 2.69
LRRC1-203ENST00000487251 TRAPPC8Q9Y2L5 1435 aa31.88■■■□□ 2.69
LRRC1-203ENST00000487251 ZNF326Q5BKZ1 582 aaKnown RBP31.86■■■□□ 2.69
LRRC1-203ENST00000487251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.86■■■□□ 2.694e-8■■■■□ 26.2
LRRC1-203ENST00000487251 OSCARQ8IYS5 282 aa31.85■■■□□ 2.69
LRRC1-203ENST00000487251 UNC13BO14795 1591 aa31.84■■■□□ 2.69
LRRC1-203ENST00000487251 C11orf95C9JLR9 678 aaPredicted RBP31.83■■■□□ 2.69
LRRC1-203ENST00000487251 ANP32CO43423 234 aa31.82■■■□□ 2.68
LRRC1-203ENST00000487251 DUOX2Q9NRD8 1548 aa31.79■■■□□ 2.68
LRRC1-203ENST00000487251 AFAP1Q8N556 730 aa31.77■■■□□ 2.68
LRRC1-203ENST00000487251 ASXL2Q76L83 1435 aa31.76■■■□□ 2.67
LRRC1-203ENST00000487251 SPATA31E1Q6ZUB1 1445 aa31.75■■■□□ 2.67
LRRC1-203ENST00000487251 ABCA9Q8IUA7 1624 aa31.75■■■□□ 2.67
LRRC1-203ENST00000487251 ARAP3Q8WWN8 1544 aa31.74■■■□□ 2.67
LRRC1-203ENST00000487251 IQGAP3Q86VI3 1631 aa31.73■■■□□ 2.67
LRRC1-203ENST00000487251 FANCAO15360 1455 aa31.71■■■□□ 2.67
LRRC1-203ENST00000487251 KDM2AQ9Y2K7 1162 aa31.71■■■□□ 2.67
LRRC1-203ENST00000487251 SPAG9O60271 1321 aaKnown RBP31.7■■■□□ 2.66
LRRC1-203ENST00000487251 CCDC7Q96M83 1385 aa31.69■■■□□ 2.66
LRRC1-203ENST00000487251 ERBINQ96RT1 1412 aa31.69■■■□□ 2.66
LRRC1-203ENST00000487251 ZFYVE16Q7Z3T8 1539 aa31.68■■■□□ 2.66
LRRC1-203ENST00000487251 PLA2R1Q13018 1463 aa31.67■■■□□ 2.66
LRRC1-203ENST00000487251 POLR1AO95602 1720 aaPredicted RBP31.66■■■□□ 2.66
LRRC1-203ENST00000487251 CCER2I3L3R5 266 aa31.66■■■□□ 2.66
LRRC1-203ENST00000487251 MAGI2Q86UL8 1455 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms