RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
PDPN-205ENST00000487038 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
PDPN-205ENST00000487038 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
PDPN-205ENST00000487038 SETD1BQ9UPS6 1966 aaKnown RBP13□□□□□ -0.33
PDPN-205ENST00000487038 SOCS7O14512 581 aa12.99□□□□□ -0.33
PDPN-205ENST00000487038 MLECQ14165 292 aa12.99□□□□□ -0.33
PDPN-205ENST00000487038 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
PDPN-205ENST00000487038 ATP10AO60312 1499 aa12.98□□□□□ -0.33
PDPN-205ENST00000487038 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
PDPN-205ENST00000487038 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
PDPN-205ENST00000487038 C3P01024 1663 aa12.97□□□□□ -0.33
PDPN-205ENST00000487038 KIF14Q15058 1648 aa12.96□□□□□ -0.33
PDPN-205ENST00000487038 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.33
PDPN-205ENST00000487038 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
PDPN-205ENST00000487038 PLCH2O75038 1416 aa12.96□□□□□ -0.34
PDPN-205ENST00000487038 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
PDPN-205ENST00000487038 EEA1Q15075 1411 aa12.95□□□□□ -0.34
PDPN-205ENST00000487038 KDM5CP41229 1560 aa12.94□□□□□ -0.34
PDPN-205ENST00000487038 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
PDPN-205ENST00000487038 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
PDPN-205ENST00000487038 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
PDPN-205ENST00000487038 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
PDPN-205ENST00000487038 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
PDPN-205ENST00000487038 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
PDPN-205ENST00000487038 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
PDPN-205ENST00000487038 PTPRTO14522 1441 aa12.91□□□□□ -0.34
PDPN-205ENST00000487038 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
PDPN-205ENST00000487038 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
PDPN-205ENST00000487038 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
PDPN-205ENST00000487038 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
PDPN-205ENST00000487038 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
PDPN-205ENST00000487038 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
PDPN-205ENST00000487038 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
PDPN-205ENST00000487038 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
PDPN-205ENST00000487038 AGLP35573 1532 aa12.87□□□□□ -0.35
PDPN-205ENST00000487038 CLIP1P30622 1438 aa12.87□□□□□ -0.35
PDPN-205ENST00000487038 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
PDPN-205ENST00000487038 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
PDPN-205ENST00000487038 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
PDPN-205ENST00000487038 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
PDPN-205ENST00000487038 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
PDPN-205ENST00000487038 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
PDPN-205ENST00000487038 CNTLNQ9NXG0 1405 aa12.84□□□□□ -0.35
PDPN-205ENST00000487038 MLH3Q9UHC1 1453 aa12.84□□□□□ -0.35
PDPN-205ENST00000487038 ABCC1P33527 1531 aa12.83□□□□□ -0.35
PDPN-205ENST00000487038 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
PDPN-205ENST00000487038 TRAPPC8Q9Y2L5 1435 aa12.83□□□□□ -0.36
PDPN-205ENST00000487038 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
PDPN-205ENST00000487038 KIDINS220Q9ULH0 1771 aa12.82□□□□□ -0.36
PDPN-205ENST00000487038 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
PDPN-205ENST00000487038 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
PDPN-205ENST00000487038 CDC42BPAQ5VT25 1732 aa12.81□□□□□ -0.36
PDPN-205ENST00000487038 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
PDPN-205ENST00000487038 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
PDPN-205ENST00000487038 NPATQ14207 1427 aa12.79□□□□□ -0.36
PDPN-205ENST00000487038 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
PDPN-205ENST00000487038 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
PDPN-205ENST00000487038 CEP170BQ9Y4F5 1589 aaPredicted RBP12.76□□□□□ -0.37
PDPN-205ENST00000487038 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
PDPN-205ENST00000487038 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
PDPN-205ENST00000487038 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
PDPN-205ENST00000487038 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
PDPN-205ENST00000487038 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
PDPN-205ENST00000487038 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
PDPN-205ENST00000487038 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
PDPN-205ENST00000487038 MED1Q15648 1581 aaPredicted RBP12.71□□□□□ -0.37
PDPN-205ENST00000487038 INO80Q9ULG1 1556 aaPredicted RBP12.71□□□□□ -0.37
PDPN-205ENST00000487038 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
PDPN-205ENST00000487038 SYCP2Q9BX26 1530 aa12.71□□□□□ -0.38
PDPN-205ENST00000487038 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
PDPN-205ENST00000487038 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
PDPN-205ENST00000487038 PKD2Q13563 968 aa12.69□□□□□ -0.38
PDPN-205ENST00000487038 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
PDPN-205ENST00000487038 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
PDPN-205ENST00000487038 CPS1P31327 1500 aa12.67□□□□□ -0.38
PDPN-205ENST00000487038 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
PDPN-205ENST00000487038 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
PDPN-205ENST00000487038 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
PDPN-205ENST00000487038 A2MP01023 1474 aa12.65□□□□□ -0.38
PDPN-205ENST00000487038 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
PDPN-205ENST00000487038 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
PDPN-205ENST00000487038 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
PDPN-205ENST00000487038 SPAG9O60271 1321 aaKnown RBP12.63□□□□□ -0.39
PDPN-205ENST00000487038 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
PDPN-205ENST00000487038 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
PDPN-205ENST00000487038 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
PDPN-205ENST00000487038 NEURL4Q96JN8 1562 aa12.61□□□□□ -0.39
PDPN-205ENST00000487038 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
PDPN-205ENST00000487038 ZNF777Q9ULD5 760 aaPredicted RBP12.61□□□□□ -0.39
PDPN-205ENST00000487038 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
PDPN-205ENST00000487038 TOM1O60784 492 aa12.6□□□□□ -0.39
PDPN-205ENST00000487038 KIAA1107Q9UPP5 1409 aa12.6□□□□□ -0.39
PDPN-205ENST00000487038 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
PDPN-205ENST00000487038 SYNMO15061 1565 aa12.58□□□□□ -0.4
PDPN-205ENST00000487038 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
PDPN-205ENST00000487038 DEPDC5O75140 1603 aa12.58□□□□□ -0.4
PDPN-205ENST00000487038 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
PDPN-205ENST00000487038 SHANK2Q9UPX8 1470 aa12.58□□□□□ -0.4
PDPN-205ENST00000487038 IQGAP1P46940 1657 aa12.57□□□□□ -0.4
PDPN-205ENST00000487038 HSPA1LP34931 641 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms