RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
PRKCB-207ENST00000486868 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
PRKCB-207ENST00000486868 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
PRKCB-207ENST00000486868 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-207ENST00000486868 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
PRKCB-207ENST00000486868 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
PRKCB-207ENST00000486868 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
PRKCB-207ENST00000486868 PLEKHH2Q8IVE3 1493 aa17.06■□□□□ 0.32
PRKCB-207ENST00000486868 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
PRKCB-207ENST00000486868 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
PRKCB-207ENST00000486868 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
PRKCB-207ENST00000486868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCB-207ENST00000486868 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
PRKCB-207ENST00000486868 PLCH2O75038 1416 aa17.04■□□□□ 0.32
PRKCB-207ENST00000486868 PREX2Q70Z35 1606 aa17.04■□□□□ 0.32
PRKCB-207ENST00000486868 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
PRKCB-207ENST00000486868 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
PRKCB-207ENST00000486868 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
PRKCB-207ENST00000486868 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
PRKCB-207ENST00000486868 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.32
PRKCB-207ENST00000486868 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
PRKCB-207ENST00000486868 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
PRKCB-207ENST00000486868 TSPY4P0CV99 314 aa17■□□□□ 0.31
PRKCB-207ENST00000486868 TSPY10P0CW01 314 aa17■□□□□ 0.31
PRKCB-207ENST00000486868 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
PRKCB-207ENST00000486868 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRKCB-207ENST00000486868 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
PRKCB-207ENST00000486868 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
PRKCB-207ENST00000486868 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
PRKCB-207ENST00000486868 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
PRKCB-207ENST00000486868 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
PRKCB-207ENST00000486868 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
PRKCB-207ENST00000486868 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
PRKCB-207ENST00000486868 SAMD9LQ8IVG5 1584 aa16.96■□□□□ 0.31
PRKCB-207ENST00000486868 ADGBQ8N7X0 1667 aa16.95■□□□□ 0.3
PRKCB-207ENST00000486868 KCNH8Q96L42 1107 aa16.95■□□□□ 0.3
PRKCB-207ENST00000486868 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
PRKCB-207ENST00000486868 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
PRKCB-207ENST00000486868 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
PRKCB-207ENST00000486868 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKCB-207ENST00000486868 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
PRKCB-207ENST00000486868 ANKRD50Q9ULJ7 1429 aa16.91■□□□□ 0.3
PRKCB-207ENST00000486868 MPHOSPH9Q99550 1183 aa16.9■□□□□ 0.3
PRKCB-207ENST00000486868 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
PRKCB-207ENST00000486868 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
PRKCB-207ENST00000486868 ABCC1P33527 1531 aa16.87■□□□□ 0.29
PRKCB-207ENST00000486868 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
PRKCB-207ENST00000486868 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
PRKCB-207ENST00000486868 KDM6BO15054 1643 aa16.87■□□□□ 0.29
PRKCB-207ENST00000486868 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
PRKCB-207ENST00000486868 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
PRKCB-207ENST00000486868 KDM5DQ9BY66 1539 aa16.84■□□□□ 0.29
PRKCB-207ENST00000486868 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
PRKCB-207ENST00000486868 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
PRKCB-207ENST00000486868 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.28
PRKCB-207ENST00000486868 FANCAO15360 1455 aa16.82■□□□□ 0.28
PRKCB-207ENST00000486868 PZPP20742 1482 aa16.81■□□□□ 0.28
PRKCB-207ENST00000486868 ANKRD30BQ9BXX2 1392 aa16.81■□□□□ 0.28
PRKCB-207ENST00000486868 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
PRKCB-207ENST00000486868 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PRKCB-207ENST00000486868 DUOX2Q9NRD8 1548 aa16.79■□□□□ 0.28
PRKCB-207ENST00000486868 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
PRKCB-207ENST00000486868 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
PRKCB-207ENST00000486868 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
PRKCB-207ENST00000486868 SPAG9O60271 1321 aaKnown RBP16.76■□□□□ 0.27
PRKCB-207ENST00000486868 NUP155O75694 1391 aa16.76■□□□□ 0.27
PRKCB-207ENST00000486868 GLI2P10070 1586 aa16.75■□□□□ 0.27
PRKCB-207ENST00000486868 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
PRKCB-207ENST00000486868 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
PRKCB-207ENST00000486868 NEO1Q92859 1461 aa16.74■□□□□ 0.27
PRKCB-207ENST00000486868 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
PRKCB-207ENST00000486868 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
PRKCB-207ENST00000486868 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
PRKCB-207ENST00000486868 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
PRKCB-207ENST00000486868 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
PRKCB-207ENST00000486868 UNC13BO14795 1591 aa16.7■□□□□ 0.26
PRKCB-207ENST00000486868 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
PRKCB-207ENST00000486868 PKD2Q13563 968 aa16.7■□□□□ 0.26
PRKCB-207ENST00000486868 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
PRKCB-207ENST00000486868 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
PRKCB-207ENST00000486868 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
PRKCB-207ENST00000486868 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
PRKCB-207ENST00000486868 DHX29Q7Z478 1369 aaKnown RBP16.66■□□□□ 0.26
PRKCB-207ENST00000486868 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
PRKCB-207ENST00000486868 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
PRKCB-207ENST00000486868 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
PRKCB-207ENST00000486868 KDM5CP41229 1560 aa16.64■□□□□ 0.25
PRKCB-207ENST00000486868 ATP10AO60312 1499 aa16.63■□□□□ 0.25
PRKCB-207ENST00000486868 FOXD1Q16676 465 aa16.63■□□□□ 0.25
PRKCB-207ENST00000486868 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
PRKCB-207ENST00000486868 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
PRKCB-207ENST00000486868 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
PRKCB-207ENST00000486868 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
PRKCB-207ENST00000486868 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
PRKCB-207ENST00000486868 DEPDC5O75140 1603 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms