RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
PRDM15-212ENST00000486812 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
PRDM15-212ENST00000486812 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
PRDM15-212ENST00000486812 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
PRDM15-212ENST00000486812 CCDC39Q9UFE4 941 aa12.93□□□□□ -0.34
PRDM15-212ENST00000486812 ARGLU1Q9NWB6 273 aaPredicted RBP12.92□□□□□ -0.34
PRDM15-212ENST00000486812 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
PRDM15-212ENST00000486812 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
PRDM15-212ENST00000486812 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
PRDM15-212ENST00000486812 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
PRDM15-212ENST00000486812 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
PRDM15-212ENST00000486812 CCDC173Q0VFZ6 552 aa12.89□□□□□ -0.35
PRDM15-212ENST00000486812 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
PRDM15-212ENST00000486812 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
PRDM15-212ENST00000486812 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
PRDM15-212ENST00000486812 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
PRDM15-212ENST00000486812 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
PRDM15-212ENST00000486812 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
PRDM15-212ENST00000486812 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
PRDM15-212ENST00000486812 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
PRDM15-212ENST00000486812 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
PRDM15-212ENST00000486812 USP8P40818 1118 aa12.85□□□□□ -0.35
PRDM15-212ENST00000486812 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
PRDM15-212ENST00000486812 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
PRDM15-212ENST00000486812 UQCRHLA0A096LP55 91 aa12.85□□□□□ -0.35
PRDM15-212ENST00000486812 UQCRHP07919 91 aa12.85□□□□□ -0.35
PRDM15-212ENST00000486812 TPM3P06753 285 aa12.85□□□□□ -0.35
PRDM15-212ENST00000486812 CLIP1P30622 1438 aa12.84□□□□□ -0.35
PRDM15-212ENST00000486812 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
PRDM15-212ENST00000486812 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
PRDM15-212ENST00000486812 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
PRDM15-212ENST00000486812 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
PRDM15-212ENST00000486812 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
PRDM15-212ENST00000486812 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
PRDM15-212ENST00000486812 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
PRDM15-212ENST00000486812 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
PRDM15-212ENST00000486812 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
PRDM15-212ENST00000486812 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
PRDM15-212ENST00000486812 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 AK7Q96M32 723 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 FGD1P98174 961 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 H0YHG0 523 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 ESPNB1AK53 854 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
PRDM15-212ENST00000486812 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-212ENST00000486812 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
PRDM15-212ENST00000486812 KCNJ4P48050 445 aa12.8□□□□□ -0.36
PRDM15-212ENST00000486812 HSP90B2PQ58FF3 399 aa12.8□□□□□ -0.36
PRDM15-212ENST00000486812 ST18O60284 1047 aa12.79□□□□□ -0.36
PRDM15-212ENST00000486812 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
PRDM15-212ENST00000486812 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
PRDM15-212ENST00000486812 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
PRDM15-212ENST00000486812 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
PRDM15-212ENST00000486812 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
PRDM15-212ENST00000486812 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.36
PRDM15-212ENST00000486812 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.36
PRDM15-212ENST00000486812 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.36
PRDM15-212ENST00000486812 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
PRDM15-212ENST00000486812 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
PRDM15-212ENST00000486812 TRAK2O60296 914 aa12.77□□□□□ -0.37
PRDM15-212ENST00000486812 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 MSH5O43196 834 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
PRDM15-212ENST00000486812 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
PRDM15-212ENST00000486812 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
PRDM15-212ENST00000486812 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
PRDM15-212ENST00000486812 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
PRDM15-212ENST00000486812 ATP6V1DQ9Y5K8 247 aa12.74□□□□□ -0.37
PRDM15-212ENST00000486812 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
PRDM15-212ENST00000486812 GIMAP7Q8NHV1 300 aa12.74□□□□□ -0.37
PRDM15-212ENST00000486812 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
PRDM15-212ENST00000486812 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
PRDM15-212ENST00000486812 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
PRDM15-212ENST00000486812 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
PRDM15-212ENST00000486812 GRPEL1Q9HAV7 217 aa12.73□□□□□ -0.37
PRDM15-212ENST00000486812 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
PRDM15-212ENST00000486812 TNIKQ9UKE5 1360 aa12.73□□□□□ -0.37
PRDM15-212ENST00000486812 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
PRDM15-212ENST00000486812 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
PRDM15-212ENST00000486812 RALBP1Q15311 655 aa12.72□□□□□ -0.37
PRDM15-212ENST00000486812 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
PRDM15-212ENST00000486812 NEFHP12036 1026 aa12.71□□□□□ -0.37
PRDM15-212ENST00000486812 HOMER1Q86YM7 354 aa12.71□□□□□ -0.37
PRDM15-212ENST00000486812 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
PRDM15-212ENST00000486812 CDR1P51861 262 aa12.71□□□□□ -0.38
PRDM15-212ENST00000486812 NUCB2P80303 420 aa12.71□□□□□ -0.38
PRDM15-212ENST00000486812 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.38
PRDM15-212ENST00000486812 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 ZSCAN30Q86W11 494 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 BECN2A8MW95 431 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
PRDM15-212ENST00000486812 CCDC34Q96HJ3 373 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 HMMRO75330 724 aa12.7□□□□□ -0.38
PRDM15-212ENST00000486812 HSPA5P11021 654 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms