RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
SLX4-203ENST00000486524 DAPK1P53355 1430 aa16.01■□□□□ 0.15
SLX4-203ENST00000486524 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
SLX4-203ENST00000486524 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
SLX4-203ENST00000486524 NUP160Q12769 1436 aa16■□□□□ 0.15
SLX4-203ENST00000486524 ABCC5O15440 1437 aa15.99■□□□□ 0.15
SLX4-203ENST00000486524 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
SLX4-203ENST00000486524 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
SLX4-203ENST00000486524 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
SLX4-203ENST00000486524 KIF14Q15058 1648 aa15.95■□□□□ 0.14
SLX4-203ENST00000486524 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
SLX4-203ENST00000486524 CAMSAP2Q08AD1 1489 aa15.94■□□□□ 0.14
SLX4-203ENST00000486524 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
SLX4-203ENST00000486524 GPATCH8Q9UKJ3 1502 aaKnown RBP15.92■□□□□ 0.14
SLX4-203ENST00000486524 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
SLX4-203ENST00000486524 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
SLX4-203ENST00000486524 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
SLX4-203ENST00000486524 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
SLX4-203ENST00000486524 ANP32CO43423 234 aa15.88■□□□□ 0.13
SLX4-203ENST00000486524 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
SLX4-203ENST00000486524 ATP10BO94823 1461 aa15.87■□□□□ 0.13
SLX4-203ENST00000486524 ABCA8O94911 1581 aa15.86■□□□□ 0.13
SLX4-203ENST00000486524 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
SLX4-203ENST00000486524 PTPRGP23470 1445 aa15.85■□□□□ 0.13
SLX4-203ENST00000486524 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
SLX4-203ENST00000486524 NCOA1Q15788 1441 aa15.84■□□□□ 0.13
SLX4-203ENST00000486524 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
SLX4-203ENST00000486524 CHD1O14646 1710 aa15.81■□□□□ 0.12
SLX4-203ENST00000486524 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
SLX4-203ENST00000486524 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
SLX4-203ENST00000486524 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
SLX4-203ENST00000486524 CDC42BPAQ5VT25 1732 aa15.8■□□□□ 0.12
SLX4-203ENST00000486524 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
SLX4-203ENST00000486524 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
SLX4-203ENST00000486524 RPRD2Q5VT52 1461 aaKnown RBP15.79■□□□□ 0.12
SLX4-203ENST00000486524 PZPP20742 1482 aa15.79■□□□□ 0.12
SLX4-203ENST00000486524 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
SLX4-203ENST00000486524 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
SLX4-203ENST00000486524 PKD2Q13563 968 aa15.78■□□□□ 0.12
SLX4-203ENST00000486524 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
SLX4-203ENST00000486524 TSPY4P0CV99 314 aa15.77■□□□□ 0.12
SLX4-203ENST00000486524 TSPY10P0CW01 314 aa15.77■□□□□ 0.12
SLX4-203ENST00000486524 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.11
SLX4-203ENST00000486524 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
SLX4-203ENST00000486524 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
SLX4-203ENST00000486524 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
SLX4-203ENST00000486524 ADGRL2O95490 1459 aa15.75■□□□□ 0.11
SLX4-203ENST00000486524 TEX14Q8IWB6 1497 aa15.75■□□□□ 0.11
SLX4-203ENST00000486524 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
SLX4-203ENST00000486524 NUP155O75694 1391 aa15.73■□□□□ 0.11
SLX4-203ENST00000486524 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
SLX4-203ENST00000486524 KIAA1107Q9UPP5 1409 aa15.72■□□□□ 0.11
SLX4-203ENST00000486524 ERCC6L2Q5T890 1561 aa15.72■□□□□ 0.11
SLX4-203ENST00000486524 KIF15Q9NS87 1388 aa15.7■□□□□ 0.1
SLX4-203ENST00000486524 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
SLX4-203ENST00000486524 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
SLX4-203ENST00000486524 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
SLX4-203ENST00000486524 MBD5Q9P267 1494 aa15.66■□□□□ 0.1
SLX4-203ENST00000486524 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
SLX4-203ENST00000486524 CCDC7Q96M83 1385 aa15.66■□□□□ 0.1
SLX4-203ENST00000486524 ARHGAP5Q13017 1502 aa15.65■□□□□ 0.1
SLX4-203ENST00000486524 SHROOM2Q13796 1616 aa15.65■□□□□ 0.1
SLX4-203ENST00000486524 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.1
SLX4-203ENST00000486524 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
SLX4-203ENST00000486524 CCDC141Q6ZP82 1450 aa15.64■□□□□ 0.09
SLX4-203ENST00000486524 BCANQ96GW7 911 aa15.64■□□□□ 0.09
SLX4-203ENST00000486524 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
SLX4-203ENST00000486524 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
SLX4-203ENST00000486524 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
SLX4-203ENST00000486524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
SLX4-203ENST00000486524 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
SLX4-203ENST00000486524 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
SLX4-203ENST00000486524 ARHGEF5Q12774 1597 aa15.62■□□□□ 0.09
SLX4-203ENST00000486524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.09
SLX4-203ENST00000486524 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
SLX4-203ENST00000486524 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
SLX4-203ENST00000486524 FKBP8Q14318 412 aa15.61■□□□□ 0.09
SLX4-203ENST00000486524 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
SLX4-203ENST00000486524 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
SLX4-203ENST00000486524 USP47Q96K76 1375 aa15.59■□□□□ 0.09
SLX4-203ENST00000486524 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
SLX4-203ENST00000486524 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
SLX4-203ENST00000486524 PRKRIP1Q9H875 184 aaPredicted RBP15.57■□□□□ 0.08
SLX4-203ENST00000486524 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
SLX4-203ENST00000486524 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
SLX4-203ENST00000486524 KDM5DQ9BY66 1539 aa15.55■□□□□ 0.08
SLX4-203ENST00000486524 FAM135AQ9P2D6 1515 aa15.55■□□□□ 0.08
SLX4-203ENST00000486524 MYO5CQ9NQX4 1742 aa15.55■□□□□ 0.08
SLX4-203ENST00000486524 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
SLX4-203ENST00000486524 NEFLP07196 543 aa15.54■□□□□ 0.08
SLX4-203ENST00000486524 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
SLX4-203ENST00000486524 ZCCHC11Q5TAX3 1644 aaKnown RBP15.53■□□□□ 0.08
SLX4-203ENST00000486524 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.08
SLX4-203ENST00000486524 ARHGEF12Q9NZN5 1544 aa15.52■□□□□ 0.07
SLX4-203ENST00000486524 PLEKHH2Q8IVE3 1493 aa15.51■□□□□ 0.07
SLX4-203ENST00000486524 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
SLX4-203ENST00000486524 EFCAB2Q5VUJ9 269 aa15.51■□□□□ 0.07
SLX4-203ENST00000486524 CCDC144AA2RUR9 1427 aa15.5■□□□□ 0.07
SLX4-203ENST00000486524 KDM5CP41229 1560 aa15.49■□□□□ 0.07
SLX4-203ENST00000486524 PLCH2O75038 1416 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms