RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 SCAPERQ9BY12 1400 aa32.5■■■□□ 2.79
CHRD-216ENST00000486066 MYO5CQ9NQX4 1742 aa32.45■■■□□ 2.78
CHRD-216ENST00000486066 ATP10AO60312 1499 aa32.43■■■□□ 2.78
CHRD-216ENST00000486066 C9orf84Q5VXU9 1444 aa32.41■■■□□ 2.78
CHRD-216ENST00000486066 PREX1Q8TCU6 1659 aa32.4■■■□□ 2.78
CHRD-216ENST00000486066 KIF14Q15058 1648 aa32.38■■■□□ 2.77
CHRD-216ENST00000486066 KDM5CP41229 1560 aa32.38■■■□□ 2.77
CHRD-216ENST00000486066 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
CHRD-216ENST00000486066 FMN1Q68DA7 1419 aa32.34■■■□□ 2.77
CHRD-216ENST00000486066 MLECQ14165 292 aa32.34■■■□□ 2.77
CHRD-216ENST00000486066 CERKQ8TCT0 537 aa32.33■■■□□ 2.77
CHRD-216ENST00000486066 PLPPR3Q6T4P5 718 aa32.32■■■□□ 2.76
CHRD-216ENST00000486066 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
CHRD-216ENST00000486066 EFCAB2Q5VUJ9 269 aa32.31■■■□□ 2.76
CHRD-216ENST00000486066 STRCQ7RTU9 1775 aa32.31■■■□□ 2.76
CHRD-216ENST00000486066 LRRIQ1Q96JM4 1722 aa32.31■■■□□ 2.76
CHRD-216ENST00000486066 REREQ9P2R6 1566 aa32.3■■■□□ 2.76
CHRD-216ENST00000486066 TROQ12816 1431 aaPredicted RBP32.27■■■□□ 2.76
CHRD-216ENST00000486066 DIP2CQ9Y2E4 1556 aa32.27■■■□□ 2.76
CHRD-216ENST00000486066 SETD1BQ9UPS6 1966 aaKnown RBP32.25■■■□□ 2.75
CHRD-216ENST00000486066 CDC42BPBQ9Y5S2 1711 aa32.23■■■□□ 2.75
CHRD-216ENST00000486066 CEBPAP49715 358 aaPredicted RBP32.21■■■□□ 2.75
CHRD-216ENST00000486066 ABCA6Q8N139 1617 aa32.21■■■□□ 2.75
CHRD-216ENST00000486066 ARHGAP5Q13017 1502 aa32.21■■■□□ 2.75
CHRD-216ENST00000486066 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
CHRD-216ENST00000486066 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
CHRD-216ENST00000486066 CDK11AQ9UQ88 783 aaPredicted RBP32.19■■■□□ 2.74
CHRD-216ENST00000486066 C3P01024 1663 aa32.15■■■□□ 2.74
CHRD-216ENST00000486066 AGLP35573 1532 aa32.15■■■□□ 2.74
CHRD-216ENST00000486066 PREX2Q70Z35 1606 aa32.15■■■□□ 2.74
CHRD-216ENST00000486066 ABCC1P33527 1531 aa32.13■■■□□ 2.73
CHRD-216ENST00000486066 UHRF1BP1Q6BDS2 1440 aa32.13■■■□□ 2.73
CHRD-216ENST00000486066 CLIP1P30622 1438 aa32.12■■■□□ 2.73
CHRD-216ENST00000486066 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
CHRD-216ENST00000486066 UBTFP17480 764 aaKnown RBP32.09■■■□□ 2.73
CHRD-216ENST00000486066 ATP1B4Q9UN42 357 aaPredicted RBP32.09■■■□□ 2.73
CHRD-216ENST00000486066 TRAPPC8Q9Y2L5 1435 aa32.08■■■□□ 2.73
CHRD-216ENST00000486066 KIDINS220Q9ULH0 1771 aa32.07■■■□□ 2.72
CHRD-216ENST00000486066 DMRT2Q9Y5R5 561 aa32.06■■■□□ 2.72
CHRD-216ENST00000486066 PTPRTO14522 1441 aa32.05■■■□□ 2.72
CHRD-216ENST00000486066 CDC42BPAQ5VT25 1732 aa32.02■■■□□ 2.72
CHRD-216ENST00000486066 LTBP4Q8N2S1 1624 aa32■■■□□ 2.71
CHRD-216ENST00000486066 CASKIN1Q8WXD9 1431 aa32■■■□□ 2.71
CHRD-216ENST00000486066 CCDC18Q5T9S5 1454 aa31.98■■■□□ 2.71
CHRD-216ENST00000486066 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
CHRD-216ENST00000486066 NCOA1Q15788 1441 aa31.93■■■□□ 2.7
CHRD-216ENST00000486066 MROH2AA6NES4 1674 aa31.93■■■□□ 2.7
CHRD-216ENST00000486066 SAMD9LQ8IVG5 1584 aa31.93■■■□□ 2.7
CHRD-216ENST00000486066 CNTLNQ9NXG0 1405 aa31.92■■■□□ 2.7
CHRD-216ENST00000486066 IQSEC2Q5JU85 1478 aa31.9■■■□□ 2.7
CHRD-216ENST00000486066 ILDR2Q71H61 639 aa31.89■■■□□ 2.7
CHRD-216ENST00000486066 MYT1LQ9UL68 1186 aa31.87■■■□□ 2.69
CHRD-216ENST00000486066 NPATQ14207 1427 aa31.86■■■□□ 2.69
CHRD-216ENST00000486066 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
CHRD-216ENST00000486066 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
CHRD-216ENST00000486066 DISP3Q9P2K9 1392 aa31.83■■■□□ 2.69
CHRD-216ENST00000486066 PLXNC1O60486 1568 aa31.83■■■□□ 2.69
CHRD-216ENST00000486066 SYCP2Q9BX26 1530 aa31.82■■■□□ 2.68
CHRD-216ENST00000486066 GPATCH8Q9UKJ3 1502 aaKnown RBP31.81■■■□□ 2.68
CHRD-216ENST00000486066 CAMSAP1Q5T5Y3 1602 aa31.79■■■□□ 2.68
CHRD-216ENST00000486066 INO80Q9ULG1 1556 aaPredicted RBP31.79■■■□□ 2.68
CHRD-216ENST00000486066 ZNF142P52746 1687 aaPredicted RBP31.78■■■□□ 2.68
CHRD-216ENST00000486066 SPATA31D1Q6ZQQ2 1576 aa31.77■■■□□ 2.68
CHRD-216ENST00000486066 ESF1Q9H501 851 aaKnown RBP31.77■■■□□ 2.68
CHRD-216ENST00000486066 SUPT6HQ7KZ85 1726 aaKnown RBP31.76■■■□□ 2.67
CHRD-216ENST00000486066 ZMYM3Q14202 1370 aa31.76■■■□□ 2.67
CHRD-216ENST00000486066 ATP7AQ04656 1500 aa31.75■■■□□ 2.67
CHRD-216ENST00000486066 KIAA1107Q9UPP5 1409 aa31.75■■■□□ 2.67
CHRD-216ENST00000486066 SOCS7O14512 581 aa31.74■■■□□ 2.67
CHRD-216ENST00000486066 MYO3AQ8NEV4 1616 aa31.72■■■□□ 2.67
CHRD-216ENST00000486066 CLTCQ00610 1675 aaKnown RBP31.72■■■□□ 2.67
CHRD-216ENST00000486066 PLA2R1Q13018 1463 aa31.7■■■□□ 2.66
CHRD-216ENST00000486066 SPAG9O60271 1321 aaKnown RBP31.69■■■□□ 2.66
CHRD-216ENST00000486066 PTPRKQ15262 1439 aa31.67■■■□□ 2.66
CHRD-216ENST00000486066 TCOF1Q13428 1488 aaKnown RBP31.67■■■□□ 2.66
CHRD-216ENST00000486066 A2MP01023 1474 aa31.66■■■□□ 2.66
CHRD-216ENST00000486066 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
CHRD-216ENST00000486066 CEP170BQ9Y4F5 1589 aaPredicted RBP31.65■■■□□ 2.66
CHRD-216ENST00000486066 HNRNPMP52272 730 aaKnown RBP eCLIP31.65■■■□□ 2.66
CHRD-216ENST00000486066 ZNF777Q9ULD5 760 aaPredicted RBP31.63■■■□□ 2.65
CHRD-216ENST00000486066 ADGBQ8N7X0 1667 aa31.6■■■□□ 2.65
CHRD-216ENST00000486066 NCKAP5LQ9HCH0 1330 aa31.6■■■□□ 2.65
CHRD-216ENST00000486066 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
CHRD-216ENST00000486066 MBD5Q9P267 1494 aa31.55■■■□□ 2.64
CHRD-216ENST00000486066 PKD2Q13563 968 aa31.55■■■□□ 2.64
CHRD-216ENST00000486066 CFDP1Q9UEE9 299 aaPredicted RBP31.55■■■□□ 2.64
CHRD-216ENST00000486066 TIAM1Q13009 1591 aa31.53■■■□□ 2.64
CHRD-216ENST00000486066 CCNB3Q8WWL7 1395 aa31.53■■■□□ 2.64
CHRD-216ENST00000486066 PPP6R1Q9UPN7 881 aa31.52■■■□□ 2.64
CHRD-216ENST00000486066 DNMT1P26358 1616 aaKnown RBP31.5■■■□□ 2.63
CHRD-216ENST00000486066 A2ML1A8K2U0 1454 aa31.48■■■□□ 2.63
CHRD-216ENST00000486066 RTEL1-TNFRSF6BF6WH68 1400 aa31.47■■■□□ 2.63
CHRD-216ENST00000486066 GGT6Q6P531 493 aa31.46■■■□□ 2.63
CHRD-216ENST00000486066 ZNF644Q9H582 1327 aaPredicted RBP31.45■■■□□ 2.62
CHRD-216ENST00000486066 MTUS2Q5JR59 1369 aa31.43■■■□□ 2.62
CHRD-216ENST00000486066 NEURL4Q96JN8 1562 aa31.43■■■□□ 2.62
CHRD-216ENST00000486066 POLR1AO95602 1720 aaPredicted RBP31.42■■■□□ 2.62
CHRD-216ENST00000486066 EHBP1L1Q8N3D4 1523 aa31.42■■■□□ 2.62
CHRD-216ENST00000486066 UBAP1LF5GYI3 381 aa31.41■■■□□ 2.62
CHRD-216ENST00000486066 FAM135AQ9P2D6 1515 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms