RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 HECW1Q76N89 1606 aa19.4■□□□□ 0.7
HLA-DOA-204ENST00000485901 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
HLA-DOA-204ENST00000485901 ATP10AO60312 1499 aa19.38■□□□□ 0.69
HLA-DOA-204ENST00000485901 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
HLA-DOA-204ENST00000485901 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
HLA-DOA-204ENST00000485901 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
HLA-DOA-204ENST00000485901 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
HLA-DOA-204ENST00000485901 FER1L4A9Z1Z3 1794 aa19.35■□□□□ 0.69
HLA-DOA-204ENST00000485901 ZNF518AQ6AHZ1 1483 aa19.34■□□□□ 0.69
HLA-DOA-204ENST00000485901 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.68
HLA-DOA-204ENST00000485901 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
HLA-DOA-204ENST00000485901 SIGLEC1Q9BZZ2 1709 aa19.32■□□□□ 0.68
HLA-DOA-204ENST00000485901 CLIP1P30622 1438 aa19.32■□□□□ 0.68
HLA-DOA-204ENST00000485901 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
HLA-DOA-204ENST00000485901 KIF14Q15058 1648 aa19.31■□□□□ 0.68
HLA-DOA-204ENST00000485901 KDM5CP41229 1560 aa19.29■□□□□ 0.68
HLA-DOA-204ENST00000485901 REREQ9P2R6 1566 aa19.28■□□□□ 0.68
HLA-DOA-204ENST00000485901 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
HLA-DOA-204ENST00000485901 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.68
HLA-DOA-204ENST00000485901 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.67
HLA-DOA-204ENST00000485901 HSPA2P54652 639 aa19.26■□□□□ 0.67
HLA-DOA-204ENST00000485901 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
HLA-DOA-204ENST00000485901 MLH3Q9UHC1 1453 aa19.25■□□□□ 0.67
HLA-DOA-204ENST00000485901 MLECQ14165 292 aa19.25■□□□□ 0.67
HLA-DOA-204ENST00000485901 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
HLA-DOA-204ENST00000485901 CERKQ8TCT0 537 aa19.24■□□□□ 0.67
HLA-DOA-204ENST00000485901 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
HLA-DOA-204ENST00000485901 AGLP35573 1532 aa19.21■□□□□ 0.67
HLA-DOA-204ENST00000485901 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
HLA-DOA-204ENST00000485901 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
HLA-DOA-204ENST00000485901 UHRF1BP1Q6BDS2 1440 aa19.18■□□□□ 0.66
HLA-DOA-204ENST00000485901 CASKIN1Q8WXD9 1431 aa19.18■□□□□ 0.66
HLA-DOA-204ENST00000485901 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
HLA-DOA-204ENST00000485901 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
HLA-DOA-204ENST00000485901 PREX2Q70Z35 1606 aa19.17■□□□□ 0.66
HLA-DOA-204ENST00000485901 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
HLA-DOA-204ENST00000485901 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
HLA-DOA-204ENST00000485901 CNTLNQ9NXG0 1405 aa19.15■□□□□ 0.66
HLA-DOA-204ENST00000485901 ABCC1P33527 1531 aa19.15■□□□□ 0.66
HLA-DOA-204ENST00000485901 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
HLA-DOA-204ENST00000485901 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
HLA-DOA-204ENST00000485901 STRCQ7RTU9 1775 aa19.13■□□□□ 0.65
HLA-DOA-204ENST00000485901 PTPRTO14522 1441 aa19.12■□□□□ 0.65
HLA-DOA-204ENST00000485901 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
HLA-DOA-204ENST00000485901 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
HLA-DOA-204ENST00000485901 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
HLA-DOA-204ENST00000485901 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
HLA-DOA-204ENST00000485901 C3P01024 1663 aa19.1■□□□□ 0.65
HLA-DOA-204ENST00000485901 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
HLA-DOA-204ENST00000485901 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
HLA-DOA-204ENST00000485901 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
HLA-DOA-204ENST00000485901 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
HLA-DOA-204ENST00000485901 NPATQ14207 1427 aa19.06■□□□□ 0.64
HLA-DOA-204ENST00000485901 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
HLA-DOA-204ENST00000485901 IQSEC2Q5JU85 1478 aa19.05■□□□□ 0.64
HLA-DOA-204ENST00000485901 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
HLA-DOA-204ENST00000485901 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
HLA-DOA-204ENST00000485901 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
HLA-DOA-204ENST00000485901 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
HLA-DOA-204ENST00000485901 NCOA1Q15788 1441 aa19■□□□□ 0.63
HLA-DOA-204ENST00000485901 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
HLA-DOA-204ENST00000485901 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
HLA-DOA-204ENST00000485901 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
HLA-DOA-204ENST00000485901 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
HLA-DOA-204ENST00000485901 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
HLA-DOA-204ENST00000485901 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
HLA-DOA-204ENST00000485901 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
HLA-DOA-204ENST00000485901 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
HLA-DOA-204ENST00000485901 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
HLA-DOA-204ENST00000485901 INO80Q9ULG1 1556 aaPredicted RBP18.93■□□□□ 0.62
HLA-DOA-204ENST00000485901 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
HLA-DOA-204ENST00000485901 A2MP01023 1474 aa18.92■□□□□ 0.62
HLA-DOA-204ENST00000485901 PLA2R1Q13018 1463 aa18.92■□□□□ 0.62
HLA-DOA-204ENST00000485901 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
HLA-DOA-204ENST00000485901 PKD2Q13563 968 aa18.92■□□□□ 0.62
HLA-DOA-204ENST00000485901 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
HLA-DOA-204ENST00000485901 CAMSAP1Q5T5Y3 1602 aa18.9■□□□□ 0.62
HLA-DOA-204ENST00000485901 ZNF142P52746 1687 aaPredicted RBP18.9■□□□□ 0.62
HLA-DOA-204ENST00000485901 ADGBQ8N7X0 1667 aa18.9■□□□□ 0.62
HLA-DOA-204ENST00000485901 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
HLA-DOA-204ENST00000485901 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
HLA-DOA-204ENST00000485901 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
HLA-DOA-204ENST00000485901 CLTCQ00610 1675 aaKnown RBP18.86■□□□□ 0.61
HLA-DOA-204ENST00000485901 FAM135AQ9P2D6 1515 aa18.86■□□□□ 0.61
HLA-DOA-204ENST00000485901 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
HLA-DOA-204ENST00000485901 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
HLA-DOA-204ENST00000485901 TCOF1Q13428 1488 aaKnown RBP18.84■□□□□ 0.61
HLA-DOA-204ENST00000485901 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
HLA-DOA-204ENST00000485901 MYO3AQ8NEV4 1616 aa18.83■□□□□ 0.61
HLA-DOA-204ENST00000485901 APLP2Q06481 763 aa18.83■□□□□ 0.6
HLA-DOA-204ENST00000485901 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
HLA-DOA-204ENST00000485901 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
HLA-DOA-204ENST00000485901 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
HLA-DOA-204ENST00000485901 GGT6Q6P531 493 aa18.82■□□□□ 0.6
HLA-DOA-204ENST00000485901 SOCS7O14512 581 aa18.81■□□□□ 0.6
HLA-DOA-204ENST00000485901 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
HLA-DOA-204ENST00000485901 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
HLA-DOA-204ENST00000485901 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
HLA-DOA-204ENST00000485901 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
HLA-DOA-204ENST00000485901 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms