RNA–Protein interactions for RNA: ENST00000485310.1

CRTAP-203, Transcript of cartilage associated protein, humanhuman

TSL 4

Gene CRTAP, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-203ENST00000485310 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
CRTAP-203ENST00000485310 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
CRTAP-203ENST00000485310 TOM1O60784 492 aa9.86□□□□□ -0.83
CRTAP-203ENST00000485310 ABCA8O94911 1581 aa9.84□□□□□ -0.83
CRTAP-203ENST00000485310 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
CRTAP-203ENST00000485310 MSH5O43196 834 aa9.84□□□□□ -0.83
CRTAP-203ENST00000485310 UGGT2Q9NYU1 1516 aa9.83□□□□□ -0.84
CRTAP-203ENST00000485310 CAMSAP1Q5T5Y3 1602 aa9.83□□□□□ -0.84
CRTAP-203ENST00000485310 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
CRTAP-203ENST00000485310 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
CRTAP-203ENST00000485310 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
CRTAP-203ENST00000485310 DENND4BO75064 1496 aaPredicted RBP9.82□□□□□ -0.84
CRTAP-203ENST00000485310 EFCAB5A4FU69 1503 aa9.82□□□□□ -0.84
CRTAP-203ENST00000485310 C3P01024 1663 aa9.81□□□□□ -0.84
CRTAP-203ENST00000485310 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
CRTAP-203ENST00000485310 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
CRTAP-203ENST00000485310 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
CRTAP-203ENST00000485310 CARMIL1Q5VZK9 1371 aa9.78□□□□□ -0.84
CRTAP-203ENST00000485310 TRAPPC8Q9Y2L5 1435 aa9.74□□□□□ -0.85
CRTAP-203ENST00000485310 ATP10BO94823 1461 aa9.74□□□□□ -0.85
CRTAP-203ENST00000485310 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
CRTAP-203ENST00000485310 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
CRTAP-203ENST00000485310 PKD2Q13563 968 aa9.72□□□□□ -0.85
CRTAP-203ENST00000485310 KIF27Q86VH2 1401 aa9.72□□□□□ -0.85
CRTAP-203ENST00000485310 ATP10AO60312 1499 aa9.72□□□□□ -0.85
CRTAP-203ENST00000485310 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
CRTAP-203ENST00000485310 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
CRTAP-203ENST00000485310 CPS1P31327 1500 aa9.7□□□□□ -0.86
CRTAP-203ENST00000485310 CFAP74Q9C0B2 1584 aa9.68□□□□□ -0.86
CRTAP-203ENST00000485310 PLA2R1Q13018 1463 aa9.68□□□□□ -0.86
CRTAP-203ENST00000485310 RAPGEF2Q9Y4G8 1499 aa9.68□□□□□ -0.86
CRTAP-203ENST00000485310 ZNF142P52746 1687 aaPredicted RBP9.67□□□□□ -0.86
CRTAP-203ENST00000485310 SHANK2Q9UPX8 1470 aa9.66□□□□□ -0.86
CRTAP-203ENST00000485310 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
CRTAP-203ENST00000485310 MYO3AQ8NEV4 1616 aa9.66□□□□□ -0.86
CRTAP-203ENST00000485310 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.87
CRTAP-203ENST00000485310 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
CRTAP-203ENST00000485310 NEURL4Q96JN8 1562 aa9.64□□□□□ -0.87
CRTAP-203ENST00000485310 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
CRTAP-203ENST00000485310 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
CRTAP-203ENST00000485310 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
CRTAP-203ENST00000485310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
CRTAP-203ENST00000485310 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
CRTAP-203ENST00000485310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.62□□□□□ -0.87
CRTAP-203ENST00000485310 LRRC7Q96NW7 1537 aa9.62□□□□□ -0.87
CRTAP-203ENST00000485310 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
CRTAP-203ENST00000485310 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
CRTAP-203ENST00000485310 DIP2CQ9Y2E4 1556 aa9.62□□□□□ -0.87
CRTAP-203ENST00000485310 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
CRTAP-203ENST00000485310 NPATQ14207 1427 aa9.61□□□□□ -0.87
CRTAP-203ENST00000485310 STRCP1A6NGW2 1772 aa9.6□□□□□ -0.87
CRTAP-203ENST00000485310 ABCA6Q8N139 1617 aa9.6□□□□□ -0.87
CRTAP-203ENST00000485310 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
CRTAP-203ENST00000485310 FAM9AQ8IZU1 332 aaPredicted RBP9.58□□□□□ -0.88
CRTAP-203ENST00000485310 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
CRTAP-203ENST00000485310 CTTNBP2Q8WZ74 1663 aa9.58□□□□□ -0.88
CRTAP-203ENST00000485310 AGLP35573 1532 aa9.57□□□□□ -0.88
CRTAP-203ENST00000485310 REREQ9P2R6 1566 aa9.57□□□□□ -0.88
CRTAP-203ENST00000485310 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
CRTAP-203ENST00000485310 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
CRTAP-203ENST00000485310 CNTLNQ9NXG0 1405 aa9.56□□□□□ -0.88
CRTAP-203ENST00000485310 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
CRTAP-203ENST00000485310 KDM5CP41229 1560 aa9.55□□□□□ -0.88
CRTAP-203ENST00000485310 PLEKHD1A6NEE1 506 aa9.55□□□□□ -0.88
CRTAP-203ENST00000485310 RBM33Q96EV2 1170 aaKnown RBP9.55□□□□□ -0.88
CRTAP-203ENST00000485310 MYT1LQ9UL68 1186 aa9.55□□□□□ -0.88
CRTAP-203ENST00000485310 RAPGEF6Q8TEU7 1601 aa9.55□□□□□ -0.88
CRTAP-203ENST00000485310 NUP153P49790 1475 aaKnown RBP9.54□□□□□ -0.88
CRTAP-203ENST00000485310 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
CRTAP-203ENST00000485310 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
CRTAP-203ENST00000485310 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
CRTAP-203ENST00000485310 SYNMO15061 1565 aa9.52□□□□□ -0.89
CRTAP-203ENST00000485310 LRP6O75581 1613 aa9.52□□□□□ -0.89
CRTAP-203ENST00000485310 ZNF518AQ6AHZ1 1483 aa9.51□□□□□ -0.89
CRTAP-203ENST00000485310 RXRBP28702 533 aa9.5□□□□□ -0.89
CRTAP-203ENST00000485310 EP400Q96L91 3159 aa9.49□□□□□ -0.89
CRTAP-203ENST00000485310 CLTCQ00610 1675 aaKnown RBP9.49□□□□□ -0.89
CRTAP-203ENST00000485310 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
CRTAP-203ENST00000485310 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
CRTAP-203ENST00000485310 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
CRTAP-203ENST00000485310 PLCH2O75038 1416 aa9.48□□□□□ -0.89
CRTAP-203ENST00000485310 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
CRTAP-203ENST00000485310 XIRP1Q702N8 1843 aaKnown RBP9.48□□□□□ -0.89
CRTAP-203ENST00000485310 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
CRTAP-203ENST00000485310 ROBO1Q9Y6N7 1651 aa9.47□□□□□ -0.89
CRTAP-203ENST00000485310 RGS12O14924 1447 aa9.47□□□□□ -0.89
CRTAP-203ENST00000485310 NPHP4O75161 1426 aaPredicted RBP9.46□□□□□ -0.9
CRTAP-203ENST00000485310 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.9
CRTAP-203ENST00000485310 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
CRTAP-203ENST00000485310 IQGAP1P46940 1657 aa9.45□□□□□ -0.9
CRTAP-203ENST00000485310 LRP5O75197 1615 aa9.44□□□□□ -0.9
CRTAP-203ENST00000485310 ITSN2Q9NZM3 1697 aa9.43□□□□□ -0.9
CRTAP-203ENST00000485310 MED14O60244 1454 aa9.43□□□□□ -0.9
CRTAP-203ENST00000485310 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
CRTAP-203ENST00000485310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.43□□□□□ -0.9
CRTAP-203ENST00000485310 MEX3CQ5U5Q3 659 aaKnown RBP9.43□□□□□ -0.9
CRTAP-203ENST00000485310 ABCC1P33527 1531 aa9.42□□□□□ -0.9
CRTAP-203ENST00000485310 JCADQ9P266 1359 aa9.42□□□□□ -0.9
CRTAP-203ENST00000485310 KIDINS220Q9ULH0 1771 aa9.42□□□□□ -0.9
CRTAP-203ENST00000485310 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms