RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
EXOSC1-210ENST00000485122 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
EXOSC1-210ENST00000485122 C3P01024 1663 aa18.15■□□□□ 0.5
EXOSC1-210ENST00000485122 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
EXOSC1-210ENST00000485122 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
EXOSC1-210ENST00000485122 CAMSAP1Q5T5Y3 1602 aa18.1■□□□□ 0.49
EXOSC1-210ENST00000485122 CFAP74Q9C0B2 1584 aa18.09■□□□□ 0.49
EXOSC1-210ENST00000485122 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
EXOSC1-210ENST00000485122 MAGI2Q86UL8 1455 aa18.08■□□□□ 0.49
EXOSC1-210ENST00000485122 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
EXOSC1-210ENST00000485122 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
EXOSC1-210ENST00000485122 RGS17Q9UGC6 210 aaPredicted RBP18.05■□□□□ 0.48
EXOSC1-210ENST00000485122 SETD1AO15047 1707 aaKnown RBP18.05■□□□□ 0.48
EXOSC1-210ENST00000485122 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
EXOSC1-210ENST00000485122 ATP10AO60312 1499 aa18.03■□□□□ 0.48
EXOSC1-210ENST00000485122 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
EXOSC1-210ENST00000485122 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
EXOSC1-210ENST00000485122 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
EXOSC1-210ENST00000485122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
EXOSC1-210ENST00000485122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
EXOSC1-210ENST00000485122 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
EXOSC1-210ENST00000485122 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
EXOSC1-210ENST00000485122 RAPGEF6Q8TEU7 1601 aa17.96■□□□□ 0.47
EXOSC1-210ENST00000485122 SCAPERQ9BY12 1400 aa17.94■□□□□ 0.46
EXOSC1-210ENST00000485122 SUPT6HQ7KZ85 1726 aaKnown RBP17.94■□□□□ 0.46
EXOSC1-210ENST00000485122 TOM1O60784 492 aa17.93■□□□□ 0.46
EXOSC1-210ENST00000485122 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
EXOSC1-210ENST00000485122 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
EXOSC1-210ENST00000485122 DIP2CQ9Y2E4 1556 aa17.88■□□□□ 0.45
EXOSC1-210ENST00000485122 NUP153P49790 1475 aaKnown RBP17.88■□□□□ 0.45
EXOSC1-210ENST00000485122 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
EXOSC1-210ENST00000485122 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
EXOSC1-210ENST00000485122 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
EXOSC1-210ENST00000485122 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
EXOSC1-210ENST00000485122 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
EXOSC1-210ENST00000485122 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
EXOSC1-210ENST00000485122 CPS1P31327 1500 aa17.84■□□□□ 0.45
EXOSC1-210ENST00000485122 PKD2Q13563 968 aa17.82■□□□□ 0.44
EXOSC1-210ENST00000485122 REREQ9P2R6 1566 aa17.81■□□□□ 0.44
EXOSC1-210ENST00000485122 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
EXOSC1-210ENST00000485122 KDM5CP41229 1560 aa17.79■□□□□ 0.44
EXOSC1-210ENST00000485122 AGLP35573 1532 aa17.79■□□□□ 0.44
EXOSC1-210ENST00000485122 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
EXOSC1-210ENST00000485122 NPATQ14207 1427 aa17.79■□□□□ 0.44
EXOSC1-210ENST00000485122 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
EXOSC1-210ENST00000485122 SHANK2Q9UPX8 1470 aa17.78■□□□□ 0.44
EXOSC1-210ENST00000485122 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
EXOSC1-210ENST00000485122 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
EXOSC1-210ENST00000485122 SAMD9Q5K651 1589 aa17.75■□□□□ 0.43
EXOSC1-210ENST00000485122 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
EXOSC1-210ENST00000485122 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
EXOSC1-210ENST00000485122 ZNF518AQ6AHZ1 1483 aa17.75■□□□□ 0.43
EXOSC1-210ENST00000485122 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
EXOSC1-210ENST00000485122 PLCH2O75038 1416 aa17.74■□□□□ 0.43
EXOSC1-210ENST00000485122 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
EXOSC1-210ENST00000485122 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
EXOSC1-210ENST00000485122 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
EXOSC1-210ENST00000485122 VWDEQ8N2E2 1590 aa17.72■□□□□ 0.43
EXOSC1-210ENST00000485122 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
EXOSC1-210ENST00000485122 UPF1Q92900 1129 aaKnown RBP eCLIP17.7■□□□□ 0.42
EXOSC1-210ENST00000485122 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
EXOSC1-210ENST00000485122 CLTCQ00610 1675 aaKnown RBP17.68■□□□□ 0.42
EXOSC1-210ENST00000485122 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
EXOSC1-210ENST00000485122 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
EXOSC1-210ENST00000485122 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
EXOSC1-210ENST00000485122 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
EXOSC1-210ENST00000485122 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
EXOSC1-210ENST00000485122 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
EXOSC1-210ENST00000485122 KIDINS220Q9ULH0 1771 aa17.61■□□□□ 0.41
EXOSC1-210ENST00000485122 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
EXOSC1-210ENST00000485122 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
EXOSC1-210ENST00000485122 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
EXOSC1-210ENST00000485122 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
EXOSC1-210ENST00000485122 KIF14Q15058 1648 aa17.58■□□□□ 0.41
EXOSC1-210ENST00000485122 SYNMO15061 1565 aa17.57■□□□□ 0.4
EXOSC1-210ENST00000485122 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
EXOSC1-210ENST00000485122 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
EXOSC1-210ENST00000485122 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
EXOSC1-210ENST00000485122 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
EXOSC1-210ENST00000485122 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
EXOSC1-210ENST00000485122 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
EXOSC1-210ENST00000485122 IQGAP1P46940 1657 aa17.5■□□□□ 0.39
EXOSC1-210ENST00000485122 ABCC1P33527 1531 aa17.5■□□□□ 0.39
EXOSC1-210ENST00000485122 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
EXOSC1-210ENST00000485122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.47■□□□□ 0.39
EXOSC1-210ENST00000485122 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
EXOSC1-210ENST00000485122 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
EXOSC1-210ENST00000485122 MED14O60244 1454 aa17.44■□□□□ 0.38
EXOSC1-210ENST00000485122 PLXNC1O60486 1568 aa17.41■□□□□ 0.38
EXOSC1-210ENST00000485122 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
EXOSC1-210ENST00000485122 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
EXOSC1-210ENST00000485122 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
EXOSC1-210ENST00000485122 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
EXOSC1-210ENST00000485122 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
EXOSC1-210ENST00000485122 LRP6O75581 1613 aa17.38■□□□□ 0.37
EXOSC1-210ENST00000485122 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
EXOSC1-210ENST00000485122 TNRQ92752 1358 aa17.38■□□□□ 0.37
EXOSC1-210ENST00000485122 GGT6Q6P531 493 aa17.37■□□□□ 0.37
EXOSC1-210ENST00000485122 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
EXOSC1-210ENST00000485122 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms