RNA–Protein interactions for RNA: ENST00000485037.5

EWSR1-219, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5

Gene EWSR1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-219ENST00000485037 G3V3G9 751 aa12.12□□□□□ -0.47
EWSR1-219ENST00000485037 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
EWSR1-219ENST00000485037 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
EWSR1-219ENST00000485037 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
EWSR1-219ENST00000485037 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
EWSR1-219ENST00000485037 WDR62O43379 1518 aa12.07□□□□□ -0.48
EWSR1-219ENST00000485037 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
EWSR1-219ENST00000485037 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
EWSR1-219ENST00000485037 EMP3P54852 163 aa12.02□□□□□ -0.49
EWSR1-219ENST00000485037 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
EWSR1-219ENST00000485037 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
EWSR1-219ENST00000485037 SOX12O15370 315 aa11.98□□□□□ -0.49
EWSR1-219ENST00000485037 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
EWSR1-219ENST00000485037 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
EWSR1-219ENST00000485037 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-219ENST00000485037 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
EWSR1-219ENST00000485037 FAM205CA6NFA0 338 aa11.94□□□□□ -0.5
EWSR1-219ENST00000485037 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
EWSR1-219ENST00000485037 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
EWSR1-219ENST00000485037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
EWSR1-219ENST00000485037 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
EWSR1-219ENST00000485037 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
EWSR1-219ENST00000485037 CEP164Q9UPV0 1460 aa11.92□□□□□ -0.5
EWSR1-219ENST00000485037 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
EWSR1-219ENST00000485037 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
EWSR1-219ENST00000485037 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
EWSR1-219ENST00000485037 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
EWSR1-219ENST00000485037 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
EWSR1-219ENST00000485037 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
EWSR1-219ENST00000485037 TAOK2Q9UL54 1235 aa11.89□□□□□ -0.51
EWSR1-219ENST00000485037 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
EWSR1-219ENST00000485037 KRTAP3-3Q9BYR6 98 aa11.86□□□□□ -0.51
EWSR1-219ENST00000485037 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
EWSR1-219ENST00000485037 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 RIMBP3CA6NJZ7 1639 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 RIMBP3BA6NNM3 1639 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 RIMBP3Q9UFD9 1639 aa11.85□□□□□ -0.51
EWSR1-219ENST00000485037 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
EWSR1-219ENST00000485037 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
EWSR1-219ENST00000485037 CFTRP13569 1480 aa11.82□□□□□ -0.52
EWSR1-219ENST00000485037 NLRP6P59044 892 aa11.81□□□□□ -0.52
EWSR1-219ENST00000485037 ERBB3P21860 1342 aa11.81□□□□□ -0.52
EWSR1-219ENST00000485037 ARHGEF11O15085 1522 aa11.8□□□□□ -0.52
EWSR1-219ENST00000485037 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
EWSR1-219ENST00000485037 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
EWSR1-219ENST00000485037 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
EWSR1-219ENST00000485037 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
EWSR1-219ENST00000485037 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
EWSR1-219ENST00000485037 WIZO95785 1651 aa11.72□□□□□ -0.53
EWSR1-219ENST00000485037 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
EWSR1-219ENST00000485037 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
EWSR1-219ENST00000485037 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
EWSR1-219ENST00000485037 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
EWSR1-219ENST00000485037 STK25O00506 426 aa11.7□□□□□ -0.54
EWSR1-219ENST00000485037 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
EWSR1-219ENST00000485037 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
EWSR1-219ENST00000485037 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
EWSR1-219ENST00000485037 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.55
EWSR1-219ENST00000485037 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.55
EWSR1-219ENST00000485037 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
EWSR1-219ENST00000485037 PKD2Q13563 968 aa11.64□□□□□ -0.55
EWSR1-219ENST00000485037 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
EWSR1-219ENST00000485037 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
EWSR1-219ENST00000485037 KIF3CO14782 793 aa11.61□□□□□ -0.55
EWSR1-219ENST00000485037 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
EWSR1-219ENST00000485037 RGL2O15211 777 aa11.6□□□□□ -0.55
EWSR1-219ENST00000485037 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
EWSR1-219ENST00000485037 C2orf72A6NCS6 295 aa11.58□□□□□ -0.56
EWSR1-219ENST00000485037 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
EWSR1-219ENST00000485037 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
EWSR1-219ENST00000485037 CHD1O14646 1710 aa11.57□□□□□ -0.56
EWSR1-219ENST00000485037 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
EWSR1-219ENST00000485037 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
EWSR1-219ENST00000485037 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.562e-9■■□□□ 12.3
EWSR1-219ENST00000485037 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
EWSR1-219ENST00000485037 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
EWSR1-219ENST00000485037 SLC34A2O95436 690 aa11.54□□□□□ -0.56
EWSR1-219ENST00000485037 PTGER2P43116 358 aa11.54□□□□□ -0.56
EWSR1-219ENST00000485037 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
EWSR1-219ENST00000485037 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
EWSR1-219ENST00000485037 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
EWSR1-219ENST00000485037 NUDT7P0C024 238 aa11.48□□□□□ -0.57
EWSR1-219ENST00000485037 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
EWSR1-219ENST00000485037 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
EWSR1-219ENST00000485037 PBX2P40425 430 aa11.47□□□□□ -0.57
EWSR1-219ENST00000485037 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.572e-7■■■■□ 21.3
EWSR1-219ENST00000485037 PPP1R37O75864 691 aa11.46□□□□□ -0.57
EWSR1-219ENST00000485037 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
EWSR1-219ENST00000485037 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-219ENST00000485037 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
EWSR1-219ENST00000485037 LHX6Q9UPM6 363 aa11.44□□□□□ -0.58
EWSR1-219ENST00000485037 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
EWSR1-219ENST00000485037 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
EWSR1-219ENST00000485037 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.58
EWSR1-219ENST00000485037 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
EWSR1-219ENST00000485037 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
EWSR1-219ENST00000485037 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
EWSR1-219ENST00000485037 FOXK1P85037 733 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms