RNA–Protein interactions for RNA: ENST00000484801.5

KHDC1-205, Transcript of KH domain containing 1, humanhuman

TSL 2

Gene KHDC1, Length 2,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-205ENST00000484801 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
KHDC1-205ENST00000484801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.91■□□□□ 0.62
KHDC1-205ENST00000484801 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
KHDC1-205ENST00000484801 RNF123Q5XPI4 1314 aa18.9■□□□□ 0.62
KHDC1-205ENST00000484801 PHLDB1Q86UU1 1377 aa18.9■□□□□ 0.62
KHDC1-205ENST00000484801 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
KHDC1-205ENST00000484801 RSPH6AQ9H0K4 717 aa18.88■□□□□ 0.61
KHDC1-205ENST00000484801 CUL7Q14999 1698 aa18.88■□□□□ 0.61
KHDC1-205ENST00000484801 ERCC6L2Q5T890 1561 aa18.86■□□□□ 0.61
KHDC1-205ENST00000484801 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
KHDC1-205ENST00000484801 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
KHDC1-205ENST00000484801 KDM5BQ9UGL1 1544 aa18.85■□□□□ 0.61
KHDC1-205ENST00000484801 GSE1Q14687 1217 aa18.85■□□□□ 0.61
KHDC1-205ENST00000484801 UACAQ9BZF9 1416 aa18.84■□□□□ 0.61
KHDC1-205ENST00000484801 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
KHDC1-205ENST00000484801 PKNOX2Q96KN3 472 aa18.84■□□□□ 0.61
KHDC1-205ENST00000484801 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
KHDC1-205ENST00000484801 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
KHDC1-205ENST00000484801 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
KHDC1-205ENST00000484801 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
KHDC1-205ENST00000484801 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
KHDC1-205ENST00000484801 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
KHDC1-205ENST00000484801 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
KHDC1-205ENST00000484801 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
KHDC1-205ENST00000484801 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
KHDC1-205ENST00000484801 GLIPR1L2Q4G1C9 344 aa18.77■□□□□ 0.6
KHDC1-205ENST00000484801 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.59
KHDC1-205ENST00000484801 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
KHDC1-205ENST00000484801 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
KHDC1-205ENST00000484801 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
KHDC1-205ENST00000484801 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
KHDC1-205ENST00000484801 JPH4Q96JJ6 628 aa18.75■□□□□ 0.59
KHDC1-205ENST00000484801 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
KHDC1-205ENST00000484801 MS4A1P11836 297 aa18.75■□□□□ 0.59
KHDC1-205ENST00000484801 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
KHDC1-205ENST00000484801 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
KHDC1-205ENST00000484801 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
KHDC1-205ENST00000484801 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
KHDC1-205ENST00000484801 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
KHDC1-205ENST00000484801 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
KHDC1-205ENST00000484801 CCDC7Q96M83 1385 aa18.72■□□□□ 0.59
KHDC1-205ENST00000484801 PDE4AP27815 886 aa18.71■□□□□ 0.59
KHDC1-205ENST00000484801 BACH2Q9BYV9 841 aa18.71■□□□□ 0.59
KHDC1-205ENST00000484801 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
KHDC1-205ENST00000484801 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
KHDC1-205ENST00000484801 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
KHDC1-205ENST00000484801 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
KHDC1-205ENST00000484801 FGD6Q6ZV73 1430 aa18.63■□□□□ 0.57
KHDC1-205ENST00000484801 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
KHDC1-205ENST00000484801 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
KHDC1-205ENST00000484801 HECW1Q76N89 1606 aa18.61■□□□□ 0.57
KHDC1-205ENST00000484801 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
KHDC1-205ENST00000484801 NAIPQ13075 1403 aa18.59■□□□□ 0.57
KHDC1-205ENST00000484801 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
KHDC1-205ENST00000484801 KIF13AQ9H1H9 1805 aa18.54■□□□□ 0.56
KHDC1-205ENST00000484801 DAXXQ9UER7 740 aaPredicted RBP18.54■□□□□ 0.56
KHDC1-205ENST00000484801 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.55
KHDC1-205ENST00000484801 KIF7Q2M1P5 1343 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 GCC2Q8IWJ2 1684 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 PTPRKQ15262 1439 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 DISP1Q96F81 1524 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 CARMIL2Q6F5E8 1435 aa18.51■□□□□ 0.55
KHDC1-205ENST00000484801 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
KHDC1-205ENST00000484801 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
KHDC1-205ENST00000484801 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
KHDC1-205ENST00000484801 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
KHDC1-205ENST00000484801 PTPRGP23470 1445 aa18.48■□□□□ 0.55
KHDC1-205ENST00000484801 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
KHDC1-205ENST00000484801 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
KHDC1-205ENST00000484801 ZMYND15Q9H091 742 aa18.47■□□□□ 0.55
KHDC1-205ENST00000484801 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
KHDC1-205ENST00000484801 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
KHDC1-205ENST00000484801 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
KHDC1-205ENST00000484801 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
KHDC1-205ENST00000484801 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
KHDC1-205ENST00000484801 RRP9O43818 475 aaKnown RBP18.43■□□□□ 0.54
KHDC1-205ENST00000484801 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
KHDC1-205ENST00000484801 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
KHDC1-205ENST00000484801 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
KHDC1-205ENST00000484801 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
KHDC1-205ENST00000484801 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
KHDC1-205ENST00000484801 FHOD3Q2V2M9 1422 aa18.41■□□□□ 0.54
KHDC1-205ENST00000484801 MYOM3Q5VTT5 1437 aa18.41■□□□□ 0.54
KHDC1-205ENST00000484801 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
KHDC1-205ENST00000484801 L1TD1Q5T7N2 865 aaKnown RBP18.4■□□□□ 0.54
KHDC1-205ENST00000484801 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
KHDC1-205ENST00000484801 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
KHDC1-205ENST00000484801 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
KHDC1-205ENST00000484801 TEX14Q8IWB6 1497 aa18.38■□□□□ 0.53
KHDC1-205ENST00000484801 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
KHDC1-205ENST00000484801 RPRD2Q5VT52 1461 aaKnown RBP18.38■□□□□ 0.53
KHDC1-205ENST00000484801 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
KHDC1-205ENST00000484801 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
KHDC1-205ENST00000484801 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
KHDC1-205ENST00000484801 MTUS2Q5JR59 1369 aa18.36■□□□□ 0.53
KHDC1-205ENST00000484801 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
KHDC1-205ENST00000484801 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
KHDC1-205ENST00000484801 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
KHDC1-205ENST00000484801 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms