RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
TMEM248-206ENST00000484751 ITSN2Q9NZM3 1697 aa12.08□□□□□ -0.48
TMEM248-206ENST00000484751 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
TMEM248-206ENST00000484751 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
TMEM248-206ENST00000484751 PPP6R1Q9UPN7 881 aa12.08□□□□□ -0.48
TMEM248-206ENST00000484751 NEFLP07196 543 aa12.07□□□□□ -0.48
TMEM248-206ENST00000484751 ABCC5O15440 1437 aa12.06□□□□□ -0.48
TMEM248-206ENST00000484751 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
TMEM248-206ENST00000484751 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
TMEM248-206ENST00000484751 NUP160Q12769 1436 aa12.05□□□□□ -0.48
TMEM248-206ENST00000484751 ADCY10Q96PN6 1610 aa12.04□□□□□ -0.48
TMEM248-206ENST00000484751 KDM5BQ9UGL1 1544 aa12.03□□□□□ -0.48
TMEM248-206ENST00000484751 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
TMEM248-206ENST00000484751 ANKRD30AQ9BXX3 1397 aa12.03□□□□□ -0.48
TMEM248-206ENST00000484751 ADGRL2O95490 1459 aa12.02□□□□□ -0.48
TMEM248-206ENST00000484751 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.48
TMEM248-206ENST00000484751 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.49
TMEM248-206ENST00000484751 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
TMEM248-206ENST00000484751 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
TMEM248-206ENST00000484751 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
TMEM248-206ENST00000484751 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
TMEM248-206ENST00000484751 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
TMEM248-206ENST00000484751 PLEKHD1A6NEE1 506 aa11.99□□□□□ -0.49
TMEM248-206ENST00000484751 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
TMEM248-206ENST00000484751 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
TMEM248-206ENST00000484751 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
TMEM248-206ENST00000484751 KIF14Q15058 1648 aa11.98□□□□□ -0.49
TMEM248-206ENST00000484751 DENND4BO75064 1496 aaPredicted RBP11.98□□□□□ -0.49
TMEM248-206ENST00000484751 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
TMEM248-206ENST00000484751 KDM6BO15054 1643 aa11.97□□□□□ -0.49
TMEM248-206ENST00000484751 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
TMEM248-206ENST00000484751 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
TMEM248-206ENST00000484751 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
TMEM248-206ENST00000484751 L3MBTL2Q969R5 705 aa11.97□□□□□ -0.49
TMEM248-206ENST00000484751 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.49
TMEM248-206ENST00000484751 KIAA1107Q9UPP5 1409 aa11.96□□□□□ -0.49
TMEM248-206ENST00000484751 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
TMEM248-206ENST00000484751 ABCA8O94911 1581 aa11.96□□□□□ -0.5
TMEM248-206ENST00000484751 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
TMEM248-206ENST00000484751 FBLN2P98095 1184 aa11.95□□□□□ -0.5
TMEM248-206ENST00000484751 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
TMEM248-206ENST00000484751 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
TMEM248-206ENST00000484751 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
TMEM248-206ENST00000484751 CCDC7Q96M83 1385 aa11.93□□□□□ -0.5
TMEM248-206ENST00000484751 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
TMEM248-206ENST00000484751 WASHC2AQ641Q2 1341 aa11.93□□□□□ -0.5
TMEM248-206ENST00000484751 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
TMEM248-206ENST00000484751 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
TMEM248-206ENST00000484751 ADRA2BP18089 450 aa11.93□□□□□ -0.5
TMEM248-206ENST00000484751 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
TMEM248-206ENST00000484751 PZPP20742 1482 aa11.92□□□□□ -0.5
TMEM248-206ENST00000484751 ANKRD50Q9ULJ7 1429 aa11.92□□□□□ -0.5
TMEM248-206ENST00000484751 C9orf84Q5VXU9 1444 aa11.91□□□□□ -0.5
TMEM248-206ENST00000484751 ARHGEF5Q12774 1597 aa11.91□□□□□ -0.5
TMEM248-206ENST00000484751 ABCC10Q5T3U5 1492 aa11.9□□□□□ -0.5
TMEM248-206ENST00000484751 FKBP8Q14318 412 aa11.9□□□□□ -0.5
TMEM248-206ENST00000484751 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
TMEM248-206ENST00000484751 ZNF777Q9ULD5 760 aaPredicted RBP11.9□□□□□ -0.5
TMEM248-206ENST00000484751 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
TMEM248-206ENST00000484751 ATP10BO94823 1461 aa11.89□□□□□ -0.51
TMEM248-206ENST00000484751 PTPRGP23470 1445 aa11.89□□□□□ -0.51
TMEM248-206ENST00000484751 ARHGEF12Q9NZN5 1544 aa11.89□□□□□ -0.51
TMEM248-206ENST00000484751 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
TMEM248-206ENST00000484751 MBD5Q9P267 1494 aa11.88□□□□□ -0.51
TMEM248-206ENST00000484751 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
TMEM248-206ENST00000484751 PLEKHH2Q8IVE3 1493 aa11.87□□□□□ -0.51
TMEM248-206ENST00000484751 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
TMEM248-206ENST00000484751 HNRNPUQ00839 825 aaKnown RBP eCLIP11.86□□□□□ -0.51
TMEM248-206ENST00000484751 PKD2Q13563 968 aa11.86□□□□□ -0.51
TMEM248-206ENST00000484751 CCDC141Q6ZP82 1450 aa11.86□□□□□ -0.51
TMEM248-206ENST00000484751 NUP155O75694 1391 aa11.85□□□□□ -0.51
TMEM248-206ENST00000484751 POLR1AO95602 1720 aaPredicted RBP11.85□□□□□ -0.51
TMEM248-206ENST00000484751 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
TMEM248-206ENST00000484751 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
TMEM248-206ENST00000484751 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
TMEM248-206ENST00000484751 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
TMEM248-206ENST00000484751 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
TMEM248-206ENST00000484751 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
TMEM248-206ENST00000484751 KIF7Q2M1P5 1343 aa11.83□□□□□ -0.52
TMEM248-206ENST00000484751 USP47Q96K76 1375 aa11.82□□□□□ -0.52
TMEM248-206ENST00000484751 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
TMEM248-206ENST00000484751 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
TMEM248-206ENST00000484751 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
TMEM248-206ENST00000484751 MAST1Q9Y2H9 1570 aa11.8□□□□□ -0.52
TMEM248-206ENST00000484751 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
TMEM248-206ENST00000484751 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
TMEM248-206ENST00000484751 BCANQ96GW7 911 aa11.77□□□□□ -0.53
TMEM248-206ENST00000484751 SHROOM2Q13796 1616 aa11.77□□□□□ -0.53
TMEM248-206ENST00000484751 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
TMEM248-206ENST00000484751 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
TMEM248-206ENST00000484751 KDM5CP41229 1560 aa11.76□□□□□ -0.53
TMEM248-206ENST00000484751 CARD11Q9BXL7 1154 aa11.76□□□□□ -0.53
TMEM248-206ENST00000484751 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
TMEM248-206ENST00000484751 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
TMEM248-206ENST00000484751 ZNF326Q5BKZ1 582 aaKnown RBP11.75□□□□□ -0.53
TMEM248-206ENST00000484751 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
TMEM248-206ENST00000484751 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
TMEM248-206ENST00000484751 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
TMEM248-206ENST00000484751 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM248-206ENST00000484751 UNC13BO14795 1591 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms