RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 SCAPERQ9BY12 1400 aa14.67□□□□□ -0.06
RTFDC1-208ENST00000484084 STRCQ7RTU9 1775 aa14.67□□□□□ -0.06
RTFDC1-208ENST00000484084 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
RTFDC1-208ENST00000484084 EEA1Q15075 1411 aa14.66□□□□□ -0.06
RTFDC1-208ENST00000484084 ATP10AO60312 1499 aa14.65□□□□□ -0.06
RTFDC1-208ENST00000484084 MLECQ14165 292 aa14.64□□□□□ -0.07
RTFDC1-208ENST00000484084 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
RTFDC1-208ENST00000484084 KIF14Q15058 1648 aa14.63□□□□□ -0.07
RTFDC1-208ENST00000484084 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-208ENST00000484084 KDM5CP41229 1560 aa14.62□□□□□ -0.07
RTFDC1-208ENST00000484084 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
RTFDC1-208ENST00000484084 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
RTFDC1-208ENST00000484084 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
RTFDC1-208ENST00000484084 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
RTFDC1-208ENST00000484084 ILDR2Q71H61 639 aa14.58□□□□□ -0.08
RTFDC1-208ENST00000484084 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
RTFDC1-208ENST00000484084 DIP2CQ9Y2E4 1556 aa14.58□□□□□ -0.08
RTFDC1-208ENST00000484084 REREQ9P2R6 1566 aa14.56□□□□□ -0.08
RTFDC1-208ENST00000484084 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
RTFDC1-208ENST00000484084 ZNF518AQ6AHZ1 1483 aa14.56□□□□□ -0.08
RTFDC1-208ENST00000484084 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
RTFDC1-208ENST00000484084 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
RTFDC1-208ENST00000484084 C3P01024 1663 aa14.55□□□□□ -0.08
RTFDC1-208ENST00000484084 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
RTFDC1-208ENST00000484084 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-208ENST00000484084 FMN1Q68DA7 1419 aa14.53□□□□□ -0.08
RTFDC1-208ENST00000484084 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
RTFDC1-208ENST00000484084 ARHGAP5Q13017 1502 aa14.51□□□□□ -0.09
RTFDC1-208ENST00000484084 TRAPPC8Q9Y2L5 1435 aa14.51□□□□□ -0.09
RTFDC1-208ENST00000484084 AGLP35573 1532 aa14.51□□□□□ -0.09
RTFDC1-208ENST00000484084 PTPRTO14522 1441 aa14.49□□□□□ -0.09
RTFDC1-208ENST00000484084 UHRF1BP1Q6BDS2 1440 aa14.49□□□□□ -0.09
RTFDC1-208ENST00000484084 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-208ENST00000484084 ABCC1P33527 1531 aa14.49□□□□□ -0.09
RTFDC1-208ENST00000484084 KIDINS220Q9ULH0 1771 aa14.49□□□□□ -0.09
RTFDC1-208ENST00000484084 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
RTFDC1-208ENST00000484084 ITSN2Q9NZM3 1697 aa14.47□□□□□ -0.09
RTFDC1-208ENST00000484084 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
RTFDC1-208ENST00000484084 ATP1B4Q9UN42 357 aaPredicted RBP14.46□□□□□ -0.09
RTFDC1-208ENST00000484084 DISP3Q9P2K9 1392 aa14.46□□□□□ -0.1
RTFDC1-208ENST00000484084 SOCS7O14512 581 aa14.45□□□□□ -0.1
RTFDC1-208ENST00000484084 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
RTFDC1-208ENST00000484084 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
RTFDC1-208ENST00000484084 EHMT2Q96KQ7 1210 aa14.44□□□□□ -0.1
RTFDC1-208ENST00000484084 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
RTFDC1-208ENST00000484084 CLIP1P30622 1438 aa14.42□□□□□ -0.1
RTFDC1-208ENST00000484084 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-208ENST00000484084 SPATA31D1Q6ZQQ2 1576 aa14.41□□□□□ -0.1
RTFDC1-208ENST00000484084 SAMD9LQ8IVG5 1584 aa14.41□□□□□ -0.1
RTFDC1-208ENST00000484084 IQSEC2Q5JU85 1478 aa14.4□□□□□ -0.1
RTFDC1-208ENST00000484084 CASKIN1Q8WXD9 1431 aa14.4□□□□□ -0.1
RTFDC1-208ENST00000484084 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
RTFDC1-208ENST00000484084 CAMSAP1Q5T5Y3 1602 aa14.39□□□□□ -0.11
RTFDC1-208ENST00000484084 NPATQ14207 1427 aa14.38□□□□□ -0.11
RTFDC1-208ENST00000484084 CNTLNQ9NXG0 1405 aa14.37□□□□□ -0.11
RTFDC1-208ENST00000484084 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
RTFDC1-208ENST00000484084 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-208ENST00000484084 ZMYM3Q14202 1370 aa14.36□□□□□ -0.11
RTFDC1-208ENST00000484084 CCDC18Q5T9S5 1454 aa14.36□□□□□ -0.11
RTFDC1-208ENST00000484084 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
RTFDC1-208ENST00000484084 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
RTFDC1-208ENST00000484084 ZNF142P52746 1687 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-208ENST00000484084 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-208ENST00000484084 NCKAP5LQ9HCH0 1330 aa14.34□□□□□ -0.11
RTFDC1-208ENST00000484084 INO80Q9ULG1 1556 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-208ENST00000484084 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.11
RTFDC1-208ENST00000484084 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.11
RTFDC1-208ENST00000484084 TCOF1Q13428 1488 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-208ENST00000484084 ZNF335Q9H4Z2 1342 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-208ENST00000484084 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
RTFDC1-208ENST00000484084 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
RTFDC1-208ENST00000484084 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
RTFDC1-208ENST00000484084 HNRNPMP52272 730 aaKnown RBP eCLIP14.31□□□□□ -0.12
RTFDC1-208ENST00000484084 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
RTFDC1-208ENST00000484084 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
RTFDC1-208ENST00000484084 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
RTFDC1-208ENST00000484084 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-208ENST00000484084 ESF1Q9H501 851 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-208ENST00000484084 SPAG9O60271 1321 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-208ENST00000484084 A2MP01023 1474 aa14.28□□□□□ -0.12
RTFDC1-208ENST00000484084 ZNF777Q9ULD5 760 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-208ENST00000484084 MBD5Q9P267 1494 aa14.25□□□□□ -0.13
RTFDC1-208ENST00000484084 DNMT1P26358 1616 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-208ENST00000484084 PKD2Q13563 968 aa14.24□□□□□ -0.13
RTFDC1-208ENST00000484084 NEURL4Q96JN8 1562 aa14.24□□□□□ -0.13
RTFDC1-208ENST00000484084 ZNF644Q9H582 1327 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-208ENST00000484084 ADGBQ8N7X0 1667 aa14.23□□□□□ -0.13
RTFDC1-208ENST00000484084 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
RTFDC1-208ENST00000484084 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
RTFDC1-208ENST00000484084 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.13
RTFDC1-208ENST00000484084 PLEKHH2Q8IVE3 1493 aa14.21□□□□□ -0.13
RTFDC1-208ENST00000484084 GGT6Q6P531 493 aa14.21□□□□□ -0.13
RTFDC1-208ENST00000484084 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-208ENST00000484084 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
RTFDC1-208ENST00000484084 FBXO31Q5XUX0 539 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-208ENST00000484084 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
RTFDC1-208ENST00000484084 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
RTFDC1-208ENST00000484084 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-208ENST00000484084 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
RTFDC1-208ENST00000484084 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms