RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
SORT1-205ENST00000483508 MLECQ14165 292 aa12.24□□□□□ -0.45
SORT1-205ENST00000483508 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
SORT1-205ENST00000483508 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
SORT1-205ENST00000483508 TTC37Q6PGP7 1564 aa12.23□□□□□ -0.45
SORT1-205ENST00000483508 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
SORT1-205ENST00000483508 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
SORT1-205ENST00000483508 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
SORT1-205ENST00000483508 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
SORT1-205ENST00000483508 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
SORT1-205ENST00000483508 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
SORT1-205ENST00000483508 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
SORT1-205ENST00000483508 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
SORT1-205ENST00000483508 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
SORT1-205ENST00000483508 MAGI2Q86UL8 1455 aa12.2□□□□□ -0.46
SORT1-205ENST00000483508 PLCH2O75038 1416 aa12.2□□□□□ -0.46
SORT1-205ENST00000483508 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
SORT1-205ENST00000483508 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
SORT1-205ENST00000483508 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
SORT1-205ENST00000483508 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
SORT1-205ENST00000483508 APLP2Q06481 763 aa12.17□□□□□ -0.46
SORT1-205ENST00000483508 KIF14Q15058 1648 aa12.16□□□□□ -0.46
SORT1-205ENST00000483508 HSPA2P54652 639 aa12.16□□□□□ -0.46
SORT1-205ENST00000483508 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
SORT1-205ENST00000483508 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
SORT1-205ENST00000483508 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
SORT1-205ENST00000483508 ATP10AO60312 1499 aa12.14□□□□□ -0.47
SORT1-205ENST00000483508 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
SORT1-205ENST00000483508 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
SORT1-205ENST00000483508 FOXD1Q16676 465 aa12.13□□□□□ -0.47
SORT1-205ENST00000483508 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
SORT1-205ENST00000483508 AFAP1Q8N556 730 aa12.12□□□□□ -0.47
SORT1-205ENST00000483508 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
SORT1-205ENST00000483508 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
SORT1-205ENST00000483508 SIGLEC1Q9BZZ2 1709 aa12.1□□□□□ -0.47
SORT1-205ENST00000483508 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
SORT1-205ENST00000483508 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
SORT1-205ENST00000483508 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
SORT1-205ENST00000483508 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
SORT1-205ENST00000483508 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
SORT1-205ENST00000483508 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
SORT1-205ENST00000483508 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 CERKQ8TCT0 537 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 PREX1Q8TCU6 1659 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 KDM5CP41229 1560 aa12.05□□□□□ -0.48
SORT1-205ENST00000483508 UHRF1BP1Q6BDS2 1440 aa12.04□□□□□ -0.48
SORT1-205ENST00000483508 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
SORT1-205ENST00000483508 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
SORT1-205ENST00000483508 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
SORT1-205ENST00000483508 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
SORT1-205ENST00000483508 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
SORT1-205ENST00000483508 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.48
SORT1-205ENST00000483508 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
SORT1-205ENST00000483508 TRAPPC8Q9Y2L5 1435 aa12.02□□□□□ -0.49
SORT1-205ENST00000483508 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
SORT1-205ENST00000483508 ABCC1P33527 1531 aa12.01□□□□□ -0.49
SORT1-205ENST00000483508 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
SORT1-205ENST00000483508 REREQ9P2R6 1566 aa12□□□□□ -0.49
SORT1-205ENST00000483508 ABCA6Q8N139 1617 aa12□□□□□ -0.49
SORT1-205ENST00000483508 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
SORT1-205ENST00000483508 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
SORT1-205ENST00000483508 CFDP1Q9UEE9 299 aaPredicted RBP11.99□□□□□ -0.49
SORT1-205ENST00000483508 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
SORT1-205ENST00000483508 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
SORT1-205ENST00000483508 C3P01024 1663 aa11.97□□□□□ -0.49
SORT1-205ENST00000483508 AGLP35573 1532 aa11.97□□□□□ -0.49
SORT1-205ENST00000483508 MTUS2Q5JR59 1369 aa11.97□□□□□ -0.49
SORT1-205ENST00000483508 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
SORT1-205ENST00000483508 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
SORT1-205ENST00000483508 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
SORT1-205ENST00000483508 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
SORT1-205ENST00000483508 SAMD9LQ8IVG5 1584 aa11.95□□□□□ -0.5
SORT1-205ENST00000483508 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
SORT1-205ENST00000483508 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
SORT1-205ENST00000483508 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
SORT1-205ENST00000483508 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
SORT1-205ENST00000483508 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
SORT1-205ENST00000483508 STRCQ7RTU9 1775 aa11.94□□□□□ -0.5
SORT1-205ENST00000483508 PLEKHH2Q8IVE3 1493 aa11.94□□□□□ -0.5
SORT1-205ENST00000483508 GGT6Q6P531 493 aa11.93□□□□□ -0.5
SORT1-205ENST00000483508 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
SORT1-205ENST00000483508 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
SORT1-205ENST00000483508 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
SORT1-205ENST00000483508 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
SORT1-205ENST00000483508 PTPRTO14522 1441 aa11.91□□□□□ -0.5
SORT1-205ENST00000483508 A2MP01023 1474 aa11.9□□□□□ -0.5
SORT1-205ENST00000483508 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
SORT1-205ENST00000483508 KIAA1107Q9UPP5 1409 aa11.9□□□□□ -0.5
SORT1-205ENST00000483508 MROH2AA6NES4 1674 aa11.9□□□□□ -0.5
SORT1-205ENST00000483508 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
SORT1-205ENST00000483508 NPATQ14207 1427 aa11.89□□□□□ -0.51
SORT1-205ENST00000483508 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
SORT1-205ENST00000483508 CLTCQ00610 1675 aaKnown RBP11.88□□□□□ -0.51
SORT1-205ENST00000483508 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
SORT1-205ENST00000483508 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
SORT1-205ENST00000483508 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
SORT1-205ENST00000483508 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
SORT1-205ENST00000483508 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms