RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
CPNE1-225ENST00000483495 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
CPNE1-225ENST00000483495 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
CPNE1-225ENST00000483495 CDC42BPAQ5VT25 1732 aa19.33■□□□□ 0.69
CPNE1-225ENST00000483495 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
CPNE1-225ENST00000483495 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
CPNE1-225ENST00000483495 KDM6BO15054 1643 aa19.28■□□□□ 0.68
CPNE1-225ENST00000483495 ADGRL2O95490 1459 aa19.27■□□□□ 0.68
CPNE1-225ENST00000483495 KDM5BQ9UGL1 1544 aa19.27■□□□□ 0.67
CPNE1-225ENST00000483495 CROCC2H7BZ55 1655 aa19.27■□□□□ 0.67
CPNE1-225ENST00000483495 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
CPNE1-225ENST00000483495 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
CPNE1-225ENST00000483495 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
CPNE1-225ENST00000483495 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
CPNE1-225ENST00000483495 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
CPNE1-225ENST00000483495 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
CPNE1-225ENST00000483495 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-225ENST00000483495 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
CPNE1-225ENST00000483495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
CPNE1-225ENST00000483495 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-225ENST00000483495 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
CPNE1-225ENST00000483495 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
CPNE1-225ENST00000483495 TTC37Q6PGP7 1564 aa19.2■□□□□ 0.66
CPNE1-225ENST00000483495 CDC42BPBQ9Y5S2 1711 aa19.19■□□□□ 0.66
CPNE1-225ENST00000483495 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
CPNE1-225ENST00000483495 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
CPNE1-225ENST00000483495 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
CPNE1-225ENST00000483495 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
CPNE1-225ENST00000483495 TRIM52Q96A61 297 aa19.16■□□□□ 0.66
CPNE1-225ENST00000483495 C9orf84Q5VXU9 1444 aa19.16■□□□□ 0.66
CPNE1-225ENST00000483495 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
CPNE1-225ENST00000483495 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
CPNE1-225ENST00000483495 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-225ENST00000483495 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
CPNE1-225ENST00000483495 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
CPNE1-225ENST00000483495 MYO5CQ9NQX4 1742 aa19.12■□□□□ 0.65
CPNE1-225ENST00000483495 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
CPNE1-225ENST00000483495 PLCH2O75038 1416 aa19.11■□□□□ 0.65
CPNE1-225ENST00000483495 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
CPNE1-225ENST00000483495 TSPY4P0CV99 314 aa19.11■□□□□ 0.65
CPNE1-225ENST00000483495 TSPY10P0CW01 314 aa19.11■□□□□ 0.65
CPNE1-225ENST00000483495 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
CPNE1-225ENST00000483495 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
CPNE1-225ENST00000483495 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
CPNE1-225ENST00000483495 PZPP20742 1482 aa19.08■□□□□ 0.64
CPNE1-225ENST00000483495 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
CPNE1-225ENST00000483495 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
CPNE1-225ENST00000483495 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
CPNE1-225ENST00000483495 ARAP3Q8WWN8 1544 aa19.06■□□□□ 0.64
CPNE1-225ENST00000483495 WDR7Q9Y4E6 1490 aa19.06■□□□□ 0.64
CPNE1-225ENST00000483495 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
CPNE1-225ENST00000483495 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
CPNE1-225ENST00000483495 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
CPNE1-225ENST00000483495 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.64
CPNE1-225ENST00000483495 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
CPNE1-225ENST00000483495 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
CPNE1-225ENST00000483495 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
CPNE1-225ENST00000483495 ABCC1P33527 1531 aa18.99■□□□□ 0.63
CPNE1-225ENST00000483495 PLXNC1O60486 1568 aa18.99■□□□□ 0.63
CPNE1-225ENST00000483495 FOXD1Q16676 465 aa18.99■□□□□ 0.63
CPNE1-225ENST00000483495 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
CPNE1-225ENST00000483495 ASXL2Q76L83 1435 aa18.97■□□□□ 0.63
CPNE1-225ENST00000483495 NUP155O75694 1391 aa18.94■□□□□ 0.62
CPNE1-225ENST00000483495 TEX14Q8IWB6 1497 aa18.92■□□□□ 0.62
CPNE1-225ENST00000483495 PKD2Q13563 968 aa18.92■□□□□ 0.62
CPNE1-225ENST00000483495 MIER1Q8N108 512 aa18.92■□□□□ 0.62
CPNE1-225ENST00000483495 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
CPNE1-225ENST00000483495 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
CPNE1-225ENST00000483495 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
CPNE1-225ENST00000483495 UNC13BO14795 1591 aa18.89■□□□□ 0.61
CPNE1-225ENST00000483495 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
CPNE1-225ENST00000483495 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
CPNE1-225ENST00000483495 FANCAO15360 1455 aa18.89■□□□□ 0.61
CPNE1-225ENST00000483495 ERBINQ96RT1 1412 aa18.88■□□□□ 0.61
CPNE1-225ENST00000483495 FAM135AQ9P2D6 1515 aa18.86■□□□□ 0.61
CPNE1-225ENST00000483495 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
CPNE1-225ENST00000483495 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
CPNE1-225ENST00000483495 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.6
CPNE1-225ENST00000483495 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
CPNE1-225ENST00000483495 ADGRL1O94910 1474 aa18.81■□□□□ 0.6
CPNE1-225ENST00000483495 AFAP1Q8N556 730 aa18.81■□□□□ 0.6
CPNE1-225ENST00000483495 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-225ENST00000483495 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
CPNE1-225ENST00000483495 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
CPNE1-225ENST00000483495 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.6
CPNE1-225ENST00000483495 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
CPNE1-225ENST00000483495 CFAP74Q9C0B2 1584 aa18.75■□□□□ 0.59
CPNE1-225ENST00000483495 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-225ENST00000483495 ATP10AO60312 1499 aa18.73■□□□□ 0.59
CPNE1-225ENST00000483495 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
CPNE1-225ENST00000483495 UHRF1BP1Q6BDS2 1440 aa18.73■□□□□ 0.59
CPNE1-225ENST00000483495 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
CPNE1-225ENST00000483495 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
CPNE1-225ENST00000483495 ZNF518AQ6AHZ1 1483 aa18.72■□□□□ 0.59
CPNE1-225ENST00000483495 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
CPNE1-225ENST00000483495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.591e-8■□□□□ 10.9
CPNE1-225ENST00000483495 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
CPNE1-225ENST00000483495 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
CPNE1-225ENST00000483495 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
CPNE1-225ENST00000483495 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms