RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MS4A1P11836 297 aa10.27□□□□□ -0.77
COL4A5-205ENST00000483338 FAM9BQ8IZU0 186 aa10.26□□□□□ -0.77
COL4A5-205ENST00000483338 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
COL4A5-205ENST00000483338 SMG6Q86US8 1419 aaKnown RBP10.26□□□□□ -0.77
COL4A5-205ENST00000483338 XRCC6P12956 609 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL4A5-205ENST00000483338 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
COL4A5-205ENST00000483338 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-205ENST00000483338 CNGB1Q14028 1251 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-205ENST00000483338 PANK2Q9BZ23 570 aa10.24□□□□□ -0.77
COL4A5-205ENST00000483338 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
COL4A5-205ENST00000483338 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
COL4A5-205ENST00000483338 ERBB4Q15303 1308 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
COL4A5-205ENST00000483338 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 RAB3GAP2Q9H2M9 1393 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 ARXQ96QS3 562 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 FGD5Q6ZNL6 1462 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 TMEM51Q9NW97 253 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
COL4A5-205ENST00000483338 CUX1P39880 1505 aa10.21□□□□□ -0.77
COL4A5-205ENST00000483338 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.77
COL4A5-205ENST00000483338 ZNF830Q96NB3 372 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-205ENST00000483338 NUDCQ9Y266 331 aa10.21□□□□□ -0.78
COL4A5-205ENST00000483338 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
COL4A5-205ENST00000483338 ESPNB1AK53 854 aa10.2□□□□□ -0.78
COL4A5-205ENST00000483338 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
COL4A5-205ENST00000483338 SYNJ1O43426 1573 aa10.2□□□□□ -0.78
COL4A5-205ENST00000483338 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
COL4A5-205ENST00000483338 RIPK4P57078 832 aa10.19□□□□□ -0.78
COL4A5-205ENST00000483338 PRDM10Q9NQV6 1147 aa10.19□□□□□ -0.78
COL4A5-205ENST00000483338 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
COL4A5-205ENST00000483338 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
COL4A5-205ENST00000483338 SKAP1Q86WV1 359 aa10.18□□□□□ -0.78
COL4A5-205ENST00000483338 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
COL4A5-205ENST00000483338 VGLL3A8MV65 326 aa10.18□□□□□ -0.78
COL4A5-205ENST00000483338 DHX37Q8IY37 1157 aaKnown RBP10.18□□□□□ -0.78
COL4A5-205ENST00000483338 MRS2Q9HD23 443 aa10.18□□□□□ -0.78
COL4A5-205ENST00000483338 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
COL4A5-205ENST00000483338 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
COL4A5-205ENST00000483338 UTP14CQ5TAP6 766 aaKnown RBP10.17□□□□□ -0.78
COL4A5-205ENST00000483338 EXOC6Q8TAG9 804 aa10.17□□□□□ -0.78
COL4A5-205ENST00000483338 GOLGA6L3A6NEY3 463 aa10.16□□□□□ -0.78
COL4A5-205ENST00000483338 DMTNQ08495 405 aa10.16□□□□□ -0.78
COL4A5-205ENST00000483338 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
COL4A5-205ENST00000483338 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
COL4A5-205ENST00000483338 FTSJ3Q8IY81 847 aaKnown RBP10.16□□□□□ -0.78
COL4A5-205ENST00000483338 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.78
COL4A5-205ENST00000483338 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.78
COL4A5-205ENST00000483338 MAP7D2Q96T17 732 aa10.15□□□□□ -0.78
COL4A5-205ENST00000483338 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
COL4A5-205ENST00000483338 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL4A5-205ENST00000483338 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
COL4A5-205ENST00000483338 KIF21BO75037 1637 aa10.14□□□□□ -0.79
COL4A5-205ENST00000483338 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
COL4A5-205ENST00000483338 PRKRIP1Q9H875 184 aaPredicted RBP10.14□□□□□ -0.79
COL4A5-205ENST00000483338 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
COL4A5-205ENST00000483338 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
COL4A5-205ENST00000483338 ZSCAN20P17040 1043 aaPredicted RBP10.12□□□□□ -0.79
COL4A5-205ENST00000483338 ARID3AQ99856 593 aa10.12□□□□□ -0.79
COL4A5-205ENST00000483338 CARMIL1Q5VZK9 1371 aa10.11□□□□□ -0.79
COL4A5-205ENST00000483338 SECISBP2LQ93073 1101 aaKnown RBP10.11□□□□□ -0.79
COL4A5-205ENST00000483338 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
COL4A5-205ENST00000483338 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
COL4A5-205ENST00000483338 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
COL4A5-205ENST00000483338 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
COL4A5-205ENST00000483338 ANP32BQ92688 251 aaKnown RBP10.1□□□□□ -0.79
COL4A5-205ENST00000483338 TEX2Q8IWB9 1127 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 RRP1P56182 461 aaKnown RBP10.09□□□□□ -0.79
COL4A5-205ENST00000483338 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
COL4A5-205ENST00000483338 SETD5Q9C0A6 1442 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 GAPVD1Q14C86 1478 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
COL4A5-205ENST00000483338 MRE11P49959 708 aa10.08□□□□□ -0.8
COL4A5-205ENST00000483338 GZF1Q9H116 711 aaPredicted RBP10.08□□□□□ -0.8
COL4A5-205ENST00000483338 IGF1RP08069 1367 aa10.08□□□□□ -0.8
COL4A5-205ENST00000483338 SENP3-EIF4A1A0A087X0R7 540 aa10.08□□□□□ -0.8
COL4A5-205ENST00000483338 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-205ENST00000483338 OFD1O75665 1012 aa10.07□□□□□ -0.8
COL4A5-205ENST00000483338 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
COL4A5-205ENST00000483338 TERF1P54274 439 aa10.07□□□□□ -0.8
COL4A5-205ENST00000483338 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
COL4A5-205ENST00000483338 FHAD1B1AJZ9 1412 aa10.06□□□□□ -0.8
COL4A5-205ENST00000483338 TRIM44Q96DX7 344 aaPredicted RBP10.06□□□□□ -0.8
COL4A5-205ENST00000483338 KIF20AO95235 890 aa10.05□□□□□ -0.8
COL4A5-205ENST00000483338 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
COL4A5-205ENST00000483338 GRPEL1Q9HAV7 217 aa10.05□□□□□ -0.8
COL4A5-205ENST00000483338 ZBTB22O15209 634 aa10.05□□□□□ -0.8
COL4A5-205ENST00000483338 WDR62O43379 1518 aa10.05□□□□□ -0.8
COL4A5-205ENST00000483338 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
COL4A5-205ENST00000483338 MTERF4Q7Z6M4 381 aaKnown RBP10.04□□□□□ -0.8
COL4A5-205ENST00000483338 TONSLQ96HA7 1378 aa10.04□□□□□ -0.8
COL4A5-205ENST00000483338 TNNT2P45379 298 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-205ENST00000483338 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
COL4A5-205ENST00000483338 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
COL4A5-205ENST00000483338 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
COL4A5-205ENST00000483338 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
COL4A5-205ENST00000483338 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
COL4A5-205ENST00000483338 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms