RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
VTI1A-205ENST00000483122 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.15
VTI1A-205ENST00000483122 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
VTI1A-205ENST00000483122 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
VTI1A-205ENST00000483122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.99■□□□□ 0.15
VTI1A-205ENST00000483122 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
VTI1A-205ENST00000483122 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
VTI1A-205ENST00000483122 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
VTI1A-205ENST00000483122 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
VTI1A-205ENST00000483122 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
VTI1A-205ENST00000483122 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
VTI1A-205ENST00000483122 UBE2Q2Q8WVN8 375 aa15.97■□□□□ 0.15
VTI1A-205ENST00000483122 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
VTI1A-205ENST00000483122 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
VTI1A-205ENST00000483122 NEFMP07197 916 aa15.97■□□□□ 0.15
VTI1A-205ENST00000483122 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
VTI1A-205ENST00000483122 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
VTI1A-205ENST00000483122 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
VTI1A-205ENST00000483122 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
VTI1A-205ENST00000483122 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
VTI1A-205ENST00000483122 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
VTI1A-205ENST00000483122 FGD6Q6ZV73 1430 aa15.94■□□□□ 0.14
VTI1A-205ENST00000483122 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
VTI1A-205ENST00000483122 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
VTI1A-205ENST00000483122 NAIPQ13075 1403 aa15.91■□□□□ 0.14
VTI1A-205ENST00000483122 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
VTI1A-205ENST00000483122 USP35Q9P2H5 1018 aa15.9■□□□□ 0.14
VTI1A-205ENST00000483122 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
VTI1A-205ENST00000483122 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
VTI1A-205ENST00000483122 FHOD3Q2V2M9 1422 aa15.89■□□□□ 0.13
VTI1A-205ENST00000483122 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
VTI1A-205ENST00000483122 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
VTI1A-205ENST00000483122 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
VTI1A-205ENST00000483122 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-205ENST00000483122 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-205ENST00000483122 PDE4AP27815 886 aa15.84■□□□□ 0.13
VTI1A-205ENST00000483122 L3MBTL2Q969R5 705 aa15.84■□□□□ 0.13
VTI1A-205ENST00000483122 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
VTI1A-205ENST00000483122 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
VTI1A-205ENST00000483122 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
VTI1A-205ENST00000483122 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
VTI1A-205ENST00000483122 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
VTI1A-205ENST00000483122 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
VTI1A-205ENST00000483122 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
VTI1A-205ENST00000483122 EFCAB5A4FU69 1503 aa15.8■□□□□ 0.12
VTI1A-205ENST00000483122 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
VTI1A-205ENST00000483122 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
VTI1A-205ENST00000483122 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
VTI1A-205ENST00000483122 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
VTI1A-205ENST00000483122 GSE1Q14687 1217 aa15.79■□□□□ 0.12
VTI1A-205ENST00000483122 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
VTI1A-205ENST00000483122 KIAA0556O60303 1618 aa15.78■□□□□ 0.12
VTI1A-205ENST00000483122 CARMIL2Q6F5E8 1435 aa15.78■□□□□ 0.12
VTI1A-205ENST00000483122 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
VTI1A-205ENST00000483122 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
VTI1A-205ENST00000483122 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
VTI1A-205ENST00000483122 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-205ENST00000483122 FOXD1Q16676 465 aa15.76■□□□□ 0.11
VTI1A-205ENST00000483122 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
VTI1A-205ENST00000483122 CHIC2Q9UKJ5 165 aa15.76■□□□□ 0.11
VTI1A-205ENST00000483122 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
VTI1A-205ENST00000483122 KDM6BO15054 1643 aa15.75■□□□□ 0.11
VTI1A-205ENST00000483122 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
VTI1A-205ENST00000483122 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
VTI1A-205ENST00000483122 RRP1P56182 461 aaKnown RBP15.74■□□□□ 0.11
VTI1A-205ENST00000483122 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
VTI1A-205ENST00000483122 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
VTI1A-205ENST00000483122 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
VTI1A-205ENST00000483122 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
VTI1A-205ENST00000483122 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
VTI1A-205ENST00000483122 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
VTI1A-205ENST00000483122 MS4A1P11836 297 aa15.72■□□□□ 0.11
VTI1A-205ENST00000483122 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
VTI1A-205ENST00000483122 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
VTI1A-205ENST00000483122 GCC2Q8IWJ2 1684 aa15.7■□□□□ 0.1
VTI1A-205ENST00000483122 LRRIQ1Q96JM4 1722 aa15.7■□□□□ 0.1
VTI1A-205ENST00000483122 SKAP1Q86WV1 359 aa15.7■□□□□ 0.1
VTI1A-205ENST00000483122 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
VTI1A-205ENST00000483122 SLC4A3P48751 1232 aa15.69■□□□□ 0.1
VTI1A-205ENST00000483122 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
VTI1A-205ENST00000483122 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
VTI1A-205ENST00000483122 TEX14Q8IWB6 1497 aa15.67■□□□□ 0.1
VTI1A-205ENST00000483122 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
VTI1A-205ENST00000483122 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
VTI1A-205ENST00000483122 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
VTI1A-205ENST00000483122 PTPRGP23470 1445 aa15.65■□□□□ 0.1
VTI1A-205ENST00000483122 BCORL1Q5H9F3 1711 aa15.65■□□□□ 0.1
VTI1A-205ENST00000483122 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
VTI1A-205ENST00000483122 ANKRD30BQ9BXX2 1392 aa15.63■□□□□ 0.09
VTI1A-205ENST00000483122 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
VTI1A-205ENST00000483122 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
VTI1A-205ENST00000483122 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
VTI1A-205ENST00000483122 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
VTI1A-205ENST00000483122 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
VTI1A-205ENST00000483122 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
VTI1A-205ENST00000483122 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.09
VTI1A-205ENST00000483122 ABCA8O94911 1581 aa15.58■□□□□ 0.09
VTI1A-205ENST00000483122 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.08
VTI1A-205ENST00000483122 PLIN1O60240 522 aa15.58■□□□□ 0.08
VTI1A-205ENST00000483122 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms