RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
CCDC78-213ENST00000482878 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
CCDC78-213ENST00000482878 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
CCDC78-213ENST00000482878 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-213ENST00000482878 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
CCDC78-213ENST00000482878 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-213ENST00000482878 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
CCDC78-213ENST00000482878 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
CCDC78-213ENST00000482878 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
CCDC78-213ENST00000482878 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-213ENST00000482878 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
CCDC78-213ENST00000482878 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.32
CCDC78-213ENST00000482878 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.32
CCDC78-213ENST00000482878 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.31
CCDC78-213ENST00000482878 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
CCDC78-213ENST00000482878 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
CCDC78-213ENST00000482878 IQGAP2Q13576 1575 aa16.99■□□□□ 0.31
CCDC78-213ENST00000482878 NCOA1Q15788 1441 aa16.99■□□□□ 0.31
CCDC78-213ENST00000482878 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-213ENST00000482878 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
CCDC78-213ENST00000482878 WDR62O43379 1518 aa16.97■□□□□ 0.31
CCDC78-213ENST00000482878 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
CCDC78-213ENST00000482878 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
CCDC78-213ENST00000482878 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-213ENST00000482878 DAPK1P53355 1430 aa16.95■□□□□ 0.3
CCDC78-213ENST00000482878 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
CCDC78-213ENST00000482878 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
CCDC78-213ENST00000482878 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
CCDC78-213ENST00000482878 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
CCDC78-213ENST00000482878 ABCC5O15440 1437 aa16.93■□□□□ 0.3
CCDC78-213ENST00000482878 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
CCDC78-213ENST00000482878 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
CCDC78-213ENST00000482878 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
CCDC78-213ENST00000482878 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
CCDC78-213ENST00000482878 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
CCDC78-213ENST00000482878 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
CCDC78-213ENST00000482878 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
CCDC78-213ENST00000482878 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-213ENST00000482878 SPATA31E1Q6ZUB1 1445 aa16.91■□□□□ 0.3
CCDC78-213ENST00000482878 PPP4R2Q9NY27 417 aa16.89■□□□□ 0.29
CCDC78-213ENST00000482878 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
CCDC78-213ENST00000482878 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-213ENST00000482878 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
CCDC78-213ENST00000482878 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
CCDC78-213ENST00000482878 NUP153P49790 1475 aaKnown RBP16.85■□□□□ 0.29
CCDC78-213ENST00000482878 DISP1Q96F81 1524 aa16.84■□□□□ 0.29
CCDC78-213ENST00000482878 B4GALNT3Q6L9W6 998 aa16.84■□□□□ 0.29
CCDC78-213ENST00000482878 PZPP20742 1482 aa16.82■□□□□ 0.28
CCDC78-213ENST00000482878 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-213ENST00000482878 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
CCDC78-213ENST00000482878 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
CCDC78-213ENST00000482878 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
CCDC78-213ENST00000482878 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
CCDC78-213ENST00000482878 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-213ENST00000482878 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
CCDC78-213ENST00000482878 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-213ENST00000482878 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
CCDC78-213ENST00000482878 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
CCDC78-213ENST00000482878 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
CCDC78-213ENST00000482878 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-213ENST00000482878 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
CCDC78-213ENST00000482878 RAPGEF6Q8TEU7 1601 aa16.76■□□□□ 0.27
CCDC78-213ENST00000482878 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
CCDC78-213ENST00000482878 USP47Q96K76 1375 aa16.76■□□□□ 0.27
CCDC78-213ENST00000482878 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-213ENST00000482878 PKD2Q13563 968 aa16.75■□□□□ 0.27
CCDC78-213ENST00000482878 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
CCDC78-213ENST00000482878 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
CCDC78-213ENST00000482878 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
CCDC78-213ENST00000482878 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-213ENST00000482878 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
CCDC78-213ENST00000482878 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
CCDC78-213ENST00000482878 BCORL1Q5H9F3 1711 aa16.71■□□□□ 0.27
CCDC78-213ENST00000482878 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.27
CCDC78-213ENST00000482878 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
CCDC78-213ENST00000482878 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
CCDC78-213ENST00000482878 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
CCDC78-213ENST00000482878 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
CCDC78-213ENST00000482878 KIF14Q15058 1648 aa16.67■□□□□ 0.26
CCDC78-213ENST00000482878 ANKRD50Q9ULJ7 1429 aa16.66■□□□□ 0.26
CCDC78-213ENST00000482878 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
CCDC78-213ENST00000482878 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
CCDC78-213ENST00000482878 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-213ENST00000482878 KDM5CP41229 1560 aa16.66■□□□□ 0.26
CCDC78-213ENST00000482878 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
CCDC78-213ENST00000482878 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CCDC78-213ENST00000482878 LAS1LQ9Y4W2 734 aaKnown RBP16.65■□□□□ 0.26
CCDC78-213ENST00000482878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC78-213ENST00000482878 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
CCDC78-213ENST00000482878 NUP155O75694 1391 aa16.64■□□□□ 0.25
CCDC78-213ENST00000482878 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
CCDC78-213ENST00000482878 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
CCDC78-213ENST00000482878 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
CCDC78-213ENST00000482878 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
CCDC78-213ENST00000482878 NEFMP07197 916 aa16.62■□□□□ 0.25
CCDC78-213ENST00000482878 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
CCDC78-213ENST00000482878 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
CCDC78-213ENST00000482878 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
CCDC78-213ENST00000482878 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
CCDC78-213ENST00000482878 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms