RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 PRG4Q92954 1404 aaPredicted RBP21.22■□□□□ 0.99
DDR1-244ENST00000482873 MSH5O43196 834 aa21.21■□□□□ 0.99
DDR1-244ENST00000482873 KIAA0586Q9BVV6 1533 aa21.2■□□□□ 0.98
DDR1-244ENST00000482873 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
DDR1-244ENST00000482873 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
DDR1-244ENST00000482873 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
DDR1-244ENST00000482873 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
DDR1-244ENST00000482873 CFDP1Q9UEE9 299 aaPredicted RBP21.19■□□□□ 0.98
DDR1-244ENST00000482873 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
DDR1-244ENST00000482873 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
DDR1-244ENST00000482873 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
DDR1-244ENST00000482873 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
DDR1-244ENST00000482873 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
DDR1-244ENST00000482873 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
DDR1-244ENST00000482873 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
DDR1-244ENST00000482873 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
DDR1-244ENST00000482873 MIA2Q96PC5 1412 aa21.15■□□□□ 0.98
DDR1-244ENST00000482873 C11orf95C9JLR9 678 aaPredicted RBP21.15■□□□□ 0.98
DDR1-244ENST00000482873 ABCC5O15440 1437 aa21.15■□□□□ 0.98
DDR1-244ENST00000482873 DAPK1P53355 1430 aa21.15■□□□□ 0.98
DDR1-244ENST00000482873 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
DDR1-244ENST00000482873 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.978e-8■■■■■ 39.6
DDR1-244ENST00000482873 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
DDR1-244ENST00000482873 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.97
DDR1-244ENST00000482873 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
DDR1-244ENST00000482873 HNRNPUQ00839 825 aaKnown RBP eCLIP21.07■□□□□ 0.96
DDR1-244ENST00000482873 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
DDR1-244ENST00000482873 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
DDR1-244ENST00000482873 GCC2Q8IWJ2 1684 aa21.06■□□□□ 0.96
DDR1-244ENST00000482873 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
DDR1-244ENST00000482873 ANKRD30BQ9BXX2 1392 aa21.04■□□□□ 0.96
DDR1-244ENST00000482873 TROQ12816 1431 aaPredicted RBP21.02■□□□□ 0.95
DDR1-244ENST00000482873 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
DDR1-244ENST00000482873 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
DDR1-244ENST00000482873 AKNAQ7Z591 1439 aa21■□□□□ 0.95
DDR1-244ENST00000482873 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
DDR1-244ENST00000482873 PKD2Q13563 968 aa21■□□□□ 0.95
DDR1-244ENST00000482873 KIF14Q15058 1648 aa21■□□□□ 0.95
DDR1-244ENST00000482873 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
DDR1-244ENST00000482873 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
DDR1-244ENST00000482873 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
DDR1-244ENST00000482873 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
DDR1-244ENST00000482873 ROCK1Q13464 1354 aa20.98■□□□□ 0.95
DDR1-244ENST00000482873 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
DDR1-244ENST00000482873 DNMT1P26358 1616 aaKnown RBP20.97■□□□□ 0.95
DDR1-244ENST00000482873 CARMIL2Q6F5E8 1435 aa20.96■□□□□ 0.95
DDR1-244ENST00000482873 NCOA1Q15788 1441 aa20.95■□□□□ 0.94
DDR1-244ENST00000482873 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
DDR1-244ENST00000482873 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
DDR1-244ENST00000482873 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
DDR1-244ENST00000482873 PZPP20742 1482 aa20.9■□□□□ 0.94
DDR1-244ENST00000482873 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
DDR1-244ENST00000482873 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
DDR1-244ENST00000482873 NUP155O75694 1391 aa20.88■□□□□ 0.93
DDR1-244ENST00000482873 PRKRIP1Q9H875 184 aaPredicted RBP20.88■□□□□ 0.93
DDR1-244ENST00000482873 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
DDR1-244ENST00000482873 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
DDR1-244ENST00000482873 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
DDR1-244ENST00000482873 ATP10BO94823 1461 aa20.87■□□□□ 0.93
DDR1-244ENST00000482873 NUP160Q12769 1436 aa20.87■□□□□ 0.93
DDR1-244ENST00000482873 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
DDR1-244ENST00000482873 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
DDR1-244ENST00000482873 ANKRD50Q9ULJ7 1429 aa20.85■□□□□ 0.93
DDR1-244ENST00000482873 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
DDR1-244ENST00000482873 ERICH6BQ5W0A0 696 aa20.85■□□□□ 0.93
DDR1-244ENST00000482873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.92
DDR1-244ENST00000482873 PTPRGP23470 1445 aa20.81■□□□□ 0.92
DDR1-244ENST00000482873 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
DDR1-244ENST00000482873 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
DDR1-244ENST00000482873 C9orf84Q5VXU9 1444 aa20.79■□□□□ 0.92
DDR1-244ENST00000482873 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
DDR1-244ENST00000482873 DCAF11Q8TEB1 546 aa20.79■□□□□ 0.92
DDR1-244ENST00000482873 USP47Q96K76 1375 aa20.77■□□□□ 0.92
DDR1-244ENST00000482873 SPATA31E1Q6ZUB1 1445 aa20.76■□□□□ 0.91
DDR1-244ENST00000482873 CARD11Q9BXL7 1154 aa20.76■□□□□ 0.91
DDR1-244ENST00000482873 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
DDR1-244ENST00000482873 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
DDR1-244ENST00000482873 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
DDR1-244ENST00000482873 ABCA8O94911 1581 aa20.73■□□□□ 0.91
DDR1-244ENST00000482873 CDC42BPAQ5VT25 1732 aa20.72■□□□□ 0.91
DDR1-244ENST00000482873 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
DDR1-244ENST00000482873 ZBED9Q6R2W3 1325 aa20.7■□□□□ 0.9
DDR1-244ENST00000482873 ADGRL2O95490 1459 aa20.7■□□□□ 0.9
DDR1-244ENST00000482873 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
DDR1-244ENST00000482873 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
DDR1-244ENST00000482873 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
DDR1-244ENST00000482873 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
DDR1-244ENST00000482873 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
DDR1-244ENST00000482873 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
DDR1-244ENST00000482873 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
DDR1-244ENST00000482873 CHD1O14646 1710 aa20.63■□□□□ 0.89
DDR1-244ENST00000482873 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
DDR1-244ENST00000482873 ERCC6L2Q5T890 1561 aa20.62■□□□□ 0.89
DDR1-244ENST00000482873 DHX29Q7Z478 1369 aaKnown RBP20.61■□□□□ 0.89
DDR1-244ENST00000482873 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
DDR1-244ENST00000482873 PAK3O75914 559 aaPredicted RBP20.61■□□□□ 0.89
DDR1-244ENST00000482873 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
DDR1-244ENST00000482873 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
DDR1-244ENST00000482873 SAMD9LQ8IVG5 1584 aa20.57■□□□□ 0.88
DDR1-244ENST00000482873 NBR1Q14596 966 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms