RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.36
GGPS1-205ENST00000482013 DAPK1P53355 1430 aa17.27■□□□□ 0.35
GGPS1-205ENST00000482013 NAIPQ13075 1403 aa17.27■□□□□ 0.35
GGPS1-205ENST00000482013 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
GGPS1-205ENST00000482013 ABCC5O15440 1437 aa17.24■□□□□ 0.35
GGPS1-205ENST00000482013 CDC42BPBQ9Y5S2 1711 aa17.22■□□□□ 0.35
GGPS1-205ENST00000482013 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
GGPS1-205ENST00000482013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.35
GGPS1-205ENST00000482013 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
GGPS1-205ENST00000482013 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
GGPS1-205ENST00000482013 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
GGPS1-205ENST00000482013 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
GGPS1-205ENST00000482013 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
GGPS1-205ENST00000482013 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
GGPS1-205ENST00000482013 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
GGPS1-205ENST00000482013 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
GGPS1-205ENST00000482013 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
GGPS1-205ENST00000482013 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
GGPS1-205ENST00000482013 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
GGPS1-205ENST00000482013 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
GGPS1-205ENST00000482013 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
GGPS1-205ENST00000482013 WDR7Q9Y4E6 1490 aa17.15■□□□□ 0.34
GGPS1-205ENST00000482013 PLCH2O75038 1416 aa17.14■□□□□ 0.33
GGPS1-205ENST00000482013 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
GGPS1-205ENST00000482013 SAMD9LQ8IVG5 1584 aa17.14■□□□□ 0.33
GGPS1-205ENST00000482013 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
GGPS1-205ENST00000482013 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
GGPS1-205ENST00000482013 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
GGPS1-205ENST00000482013 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
GGPS1-205ENST00000482013 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
GGPS1-205ENST00000482013 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
GGPS1-205ENST00000482013 NPM1P06748 294 aaKnown RBP eCLIP17.11■□□□□ 0.33
GGPS1-205ENST00000482013 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
GGPS1-205ENST00000482013 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
GGPS1-205ENST00000482013 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
GGPS1-205ENST00000482013 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
GGPS1-205ENST00000482013 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
GGPS1-205ENST00000482013 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
GGPS1-205ENST00000482013 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
GGPS1-205ENST00000482013 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
GGPS1-205ENST00000482013 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
GGPS1-205ENST00000482013 KDM6BO15054 1643 aa17.07■□□□□ 0.32
GGPS1-205ENST00000482013 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.32
GGPS1-205ENST00000482013 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
GGPS1-205ENST00000482013 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
GGPS1-205ENST00000482013 ABCC1P33527 1531 aa17.01■□□□□ 0.31
GGPS1-205ENST00000482013 PLXNC1O60486 1568 aa17■□□□□ 0.31
GGPS1-205ENST00000482013 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
GGPS1-205ENST00000482013 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
GGPS1-205ENST00000482013 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
GGPS1-205ENST00000482013 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
GGPS1-205ENST00000482013 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
GGPS1-205ENST00000482013 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
GGPS1-205ENST00000482013 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.31
GGPS1-205ENST00000482013 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
GGPS1-205ENST00000482013 FANCAO15360 1455 aa16.96■□□□□ 0.31
GGPS1-205ENST00000482013 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
GGPS1-205ENST00000482013 CFAP74Q9C0B2 1584 aa16.96■□□□□ 0.31
GGPS1-205ENST00000482013 KDM5DQ9BY66 1539 aa16.96■□□□□ 0.3
GGPS1-205ENST00000482013 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
GGPS1-205ENST00000482013 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
GGPS1-205ENST00000482013 PZPP20742 1482 aa16.93■□□□□ 0.3
GGPS1-205ENST00000482013 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
GGPS1-205ENST00000482013 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
GGPS1-205ENST00000482013 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
GGPS1-205ENST00000482013 TRAPPC8Q9Y2L5 1435 aa16.9■□□□□ 0.3
GGPS1-205ENST00000482013 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
GGPS1-205ENST00000482013 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
GGPS1-205ENST00000482013 GLI2P10070 1586 aa16.89■□□□□ 0.29
GGPS1-205ENST00000482013 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
GGPS1-205ENST00000482013 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
GGPS1-205ENST00000482013 ERBINQ96RT1 1412 aa16.88■□□□□ 0.29
GGPS1-205ENST00000482013 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
GGPS1-205ENST00000482013 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
GGPS1-205ENST00000482013 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
GGPS1-205ENST00000482013 UNC13BO14795 1591 aa16.87■□□□□ 0.29
GGPS1-205ENST00000482013 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
GGPS1-205ENST00000482013 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
GGPS1-205ENST00000482013 NEO1Q92859 1461 aa16.86■□□□□ 0.29
GGPS1-205ENST00000482013 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
GGPS1-205ENST00000482013 NUP155O75694 1391 aa16.85■□□□□ 0.29
GGPS1-205ENST00000482013 ZFYVE16Q7Z3T8 1539 aa16.84■□□□□ 0.29
GGPS1-205ENST00000482013 ATP7AQ04656 1500 aa16.83■□□□□ 0.28
GGPS1-205ENST00000482013 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.28
GGPS1-205ENST00000482013 MAP3K4Q9Y6R4 1608 aa16.83■□□□□ 0.28
GGPS1-205ENST00000482013 ZNF518AQ6AHZ1 1483 aa16.82■□□□□ 0.28
GGPS1-205ENST00000482013 MAGI2Q86UL8 1455 aa16.81■□□□□ 0.28
GGPS1-205ENST00000482013 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
GGPS1-205ENST00000482013 PKD2Q13563 968 aa16.8■□□□□ 0.28
GGPS1-205ENST00000482013 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
GGPS1-205ENST00000482013 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
GGPS1-205ENST00000482013 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
GGPS1-205ENST00000482013 KDM5CP41229 1560 aa16.78■□□□□ 0.28
GGPS1-205ENST00000482013 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
GGPS1-205ENST00000482013 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
GGPS1-205ENST00000482013 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
GGPS1-205ENST00000482013 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
GGPS1-205ENST00000482013 DHX29Q7Z478 1369 aaKnown RBP16.76■□□□□ 0.27
GGPS1-205ENST00000482013 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
GGPS1-205ENST00000482013 FOXD1Q16676 465 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms