RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 PLCH2O75038 1416 aa29.21■■■□□ 2.27
RXRB-203ENST00000481441 SCAPERQ9BY12 1400 aa29.21■■■□□ 2.27
RXRB-203ENST00000481441 CERKQ8TCT0 537 aa29.2■■■□□ 2.26
RXRB-203ENST00000481441 ARHGEF12Q9NZN5 1544 aa29.17■■■□□ 2.26
RXRB-203ENST00000481441 ATP10AO60312 1499 aa29.15■■■□□ 2.26
RXRB-203ENST00000481441 PREX1Q8TCU6 1659 aa29.13■■■□□ 2.25
RXRB-203ENST00000481441 C9orf84Q5VXU9 1444 aa29.12■■■□□ 2.25
RXRB-203ENST00000481441 MYO5CQ9NQX4 1742 aa29.12■■■□□ 2.25
RXRB-203ENST00000481441 EFCAB2Q5VUJ9 269 aa29.07■■■□□ 2.24
RXRB-203ENST00000481441 CEBPAP49715 358 aaPredicted RBP29.04■■■□□ 2.24
RXRB-203ENST00000481441 KIF14Q15058 1648 aa29.03■■■□□ 2.24
RXRB-203ENST00000481441 STRCQ7RTU9 1775 aa29.02■■■□□ 2.24
RXRB-203ENST00000481441 FMN1Q68DA7 1419 aa29.01■■■□□ 2.24
RXRB-203ENST00000481441 ZNF518AQ6AHZ1 1483 aa29.01■■■□□ 2.24
RXRB-203ENST00000481441 KDM5CP41229 1560 aa29.01■■■□□ 2.23
RXRB-203ENST00000481441 ATP1B4Q9UN42 357 aaPredicted RBP28.98■■■□□ 2.23
RXRB-203ENST00000481441 SETD1BQ9UPS6 1966 aaKnown RBP28.98■■■□□ 2.23
RXRB-203ENST00000481441 CDK11AQ9UQ88 783 aaPredicted RBP28.97■■■□□ 2.23
RXRB-203ENST00000481441 AFAP1Q8N556 730 aa28.95■■■□□ 2.23
RXRB-203ENST00000481441 ARHGAP35Q9NRY4 1499 aa28.95■■■□□ 2.23
RXRB-203ENST00000481441 DIP2CQ9Y2E4 1556 aa28.95■■■□□ 2.22
RXRB-203ENST00000481441 ARHGAP5Q13017 1502 aa28.95■■■□□ 2.22
RXRB-203ENST00000481441 TROQ12816 1431 aaPredicted RBP28.95■■■□□ 2.22
RXRB-203ENST00000481441 DMRT2Q9Y5R5 561 aa28.94■■■□□ 2.22
RXRB-203ENST00000481441 REREQ9P2R6 1566 aa28.93■■■□□ 2.22
RXRB-203ENST00000481441 UHRF1BP1Q6BDS2 1440 aa28.93■■■□□ 2.22
RXRB-203ENST00000481441 LRRIQ1Q96JM4 1722 aa28.9■■■□□ 2.22
RXRB-203ENST00000481441 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.21
RXRB-203ENST00000481441 CDC42BPBQ9Y5S2 1711 aa28.88■■■□□ 2.21
RXRB-203ENST00000481441 C3P01024 1663 aa28.88■■■□□ 2.21
RXRB-203ENST00000481441 ABCA6Q8N139 1617 aa28.88■■■□□ 2.21
RXRB-203ENST00000481441 CLIP1P30622 1438 aa28.88■■■□□ 2.21
RXRB-203ENST00000481441 MLH3Q9UHC1 1453 aa28.87■■■□□ 2.21
RXRB-203ENST00000481441 EHMT2Q96KQ7 1210 aa28.85■■■□□ 2.21
RXRB-203ENST00000481441 MYT1LQ9UL68 1186 aa28.84■■■□□ 2.21
RXRB-203ENST00000481441 AGLP35573 1532 aa28.83■■■□□ 2.21
RXRB-203ENST00000481441 DISP3Q9P2K9 1392 aa28.83■■■□□ 2.21
RXRB-203ENST00000481441 PTPRTO14522 1441 aa28.83■■■□□ 2.21
RXRB-203ENST00000481441 ILDR2Q71H61 639 aa28.81■■■□□ 2.2
RXRB-203ENST00000481441 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
RXRB-203ENST00000481441 ABCC1P33527 1531 aa28.8■■■□□ 2.2
RXRB-203ENST00000481441 TRAPPC8Q9Y2L5 1435 aa28.8■■■□□ 2.2
RXRB-203ENST00000481441 ITSN2Q9NZM3 1697 aa28.78■■■□□ 2.2
RXRB-203ENST00000481441 KIDINS220Q9ULH0 1771 aa28.75■■■□□ 2.19
RXRB-203ENST00000481441 LTBP4Q8N2S1 1624 aa28.74■■■□□ 2.19
RXRB-203ENST00000481441 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
RXRB-203ENST00000481441 SOCS7O14512 581 aa28.71■■■□□ 2.19
RXRB-203ENST00000481441 NCOA1Q15788 1441 aa28.7■■■□□ 2.18
RXRB-203ENST00000481441 CNTLNQ9NXG0 1405 aa28.7■■■□□ 2.18
RXRB-203ENST00000481441 CDC42BPAQ5VT25 1732 aa28.69■■■□□ 2.18
RXRB-203ENST00000481441 IQSEC2Q5JU85 1478 aa28.67■■■□□ 2.18
RXRB-203ENST00000481441 CCDC18Q5T9S5 1454 aa28.67■■■□□ 2.18
RXRB-203ENST00000481441 SPATA31D1Q6ZQQ2 1576 aa28.67■■■□□ 2.18
RXRB-203ENST00000481441 CASKIN1Q8WXD9 1431 aa28.66■■■□□ 2.18
RXRB-203ENST00000481441 MROH2AA6NES4 1674 aa28.65■■■□□ 2.18
RXRB-203ENST00000481441 SAMD9LQ8IVG5 1584 aa28.63■■■□□ 2.17
RXRB-203ENST00000481441 NPATQ14207 1427 aa28.62■■■□□ 2.17
RXRB-203ENST00000481441 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
RXRB-203ENST00000481441 ZMYM3Q14202 1370 aa28.56■■■□□ 2.16
RXRB-203ENST00000481441 SYCP2Q9BX26 1530 aa28.55■■■□□ 2.16
RXRB-203ENST00000481441 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
RXRB-203ENST00000481441 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
RXRB-203ENST00000481441 FYCO1Q9BQS8 1478 aa28.51■■■□□ 2.16
RXRB-203ENST00000481441 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
RXRB-203ENST00000481441 SPAG9O60271 1321 aaKnown RBP28.51■■■□□ 2.15
RXRB-203ENST00000481441 CLTCQ00610 1675 aaKnown RBP28.51■■■□□ 2.15
RXRB-203ENST00000481441 ZNF142P52746 1687 aaPredicted RBP28.5■■■□□ 2.15
RXRB-203ENST00000481441 PLXNC1O60486 1568 aa28.49■■■□□ 2.15
RXRB-203ENST00000481441 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
RXRB-203ENST00000481441 NCKAP5LQ9HCH0 1330 aa28.49■■■□□ 2.15
RXRB-203ENST00000481441 ATP7AQ04656 1500 aa28.49■■■□□ 2.15
RXRB-203ENST00000481441 HNRNPMP52272 730 aaKnown RBP eCLIP28.48■■■□□ 2.15
RXRB-203ENST00000481441 INO80Q9ULG1 1556 aaPredicted RBP28.48■■■□□ 2.15
RXRB-203ENST00000481441 MYO3AQ8NEV4 1616 aa28.48■■■□□ 2.15
RXRB-203ENST00000481441 ZNF335Q9H4Z2 1342 aaPredicted RBP28.46■■■□□ 2.15
RXRB-203ENST00000481441 PLA2R1Q13018 1463 aa28.46■■■□□ 2.15
RXRB-203ENST00000481441 KIAA1107Q9UPP5 1409 aa28.45■■■□□ 2.14
RXRB-203ENST00000481441 A2MP01023 1474 aa28.44■■■□□ 2.14
RXRB-203ENST00000481441 PTPRKQ15262 1439 aa28.44■■■□□ 2.14
RXRB-203ENST00000481441 CEP170BQ9Y4F5 1589 aaPredicted RBP28.43■■■□□ 2.14
RXRB-203ENST00000481441 TCOF1Q13428 1488 aaKnown RBP28.42■■■□□ 2.14
RXRB-203ENST00000481441 PLEKHH2Q8IVE3 1493 aa28.42■■■□□ 2.14
RXRB-203ENST00000481441 PKD2Q13563 968 aa28.42■■■□□ 2.14
RXRB-203ENST00000481441 UBAP1LF5GYI3 381 aa28.39■■■□□ 2.13
RXRB-203ENST00000481441 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
RXRB-203ENST00000481441 ADGBQ8N7X0 1667 aa28.36■■■□□ 2.13
RXRB-203ENST00000481441 GGT6Q6P531 493 aa28.36■■■□□ 2.13
RXRB-203ENST00000481441 CCNB3Q8WWL7 1395 aa28.34■■■□□ 2.13
RXRB-203ENST00000481441 PPP6R1Q9UPN7 881 aa28.32■■■□□ 2.12
RXRB-203ENST00000481441 DNMT1P26358 1616 aaKnown RBP28.29■■■□□ 2.12
RXRB-203ENST00000481441 A2ML1A8K2U0 1454 aa28.29■■■□□ 2.12
RXRB-203ENST00000481441 MBD5Q9P267 1494 aa28.25■■■□□ 2.11
RXRB-203ENST00000481441 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
RXRB-203ENST00000481441 MTUS2Q5JR59 1369 aa28.24■■■□□ 2.11
RXRB-203ENST00000481441 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
RXRB-203ENST00000481441 POLR1AO95602 1720 aaPredicted RBP28.22■■■□□ 2.11
RXRB-203ENST00000481441 RTEL1-TNFRSF6BF6WH68 1400 aa28.21■■■□□ 2.11
RXRB-203ENST00000481441 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.1
RXRB-203ENST00000481441 DHX29Q7Z478 1369 aaKnown RBP28.19■■■□□ 2.1
RXRB-203ENST00000481441 CPS1P31327 1500 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms