RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 FOXD1Q16676 465 aa20.03■□□□□ 0.8
PHF3-204ENST00000481385 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
PHF3-204ENST00000481385 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
PHF3-204ENST00000481385 TROQ12816 1431 aaPredicted RBP20.01■□□□□ 0.79
PHF3-204ENST00000481385 KIF14Q15058 1648 aa20■□□□□ 0.79
PHF3-204ENST00000481385 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
PHF3-204ENST00000481385 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
PHF3-204ENST00000481385 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
PHF3-204ENST00000481385 CAMSAP2Q08AD1 1489 aa19.96■□□□□ 0.79
PHF3-204ENST00000481385 GPATCH8Q9UKJ3 1502 aaKnown RBP19.96■□□□□ 0.79
PHF3-204ENST00000481385 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
PHF3-204ENST00000481385 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
PHF3-204ENST00000481385 ADCY10Q96PN6 1610 aa19.92■□□□□ 0.78
PHF3-204ENST00000481385 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
PHF3-204ENST00000481385 ABCA8O94911 1581 aa19.9■□□□□ 0.78
PHF3-204ENST00000481385 ANKRD30BQ9BXX2 1392 aa19.9■□□□□ 0.78
PHF3-204ENST00000481385 L3MBTL2Q969R5 705 aa19.9■□□□□ 0.78
PHF3-204ENST00000481385 ITSN2Q9NZM3 1697 aa19.89■□□□□ 0.78
PHF3-204ENST00000481385 ATP10BO94823 1461 aa19.87■□□□□ 0.77
PHF3-204ENST00000481385 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
PHF3-204ENST00000481385 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
PHF3-204ENST00000481385 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
PHF3-204ENST00000481385 PZPP20742 1482 aa19.85■□□□□ 0.77
PHF3-204ENST00000481385 RPRD2Q5VT52 1461 aaKnown RBP19.85■□□□□ 0.77
PHF3-204ENST00000481385 ANP32CO43423 234 aa19.84■□□□□ 0.77
PHF3-204ENST00000481385 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
PHF3-204ENST00000481385 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.77
PHF3-204ENST00000481385 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.77
PHF3-204ENST00000481385 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.77
PHF3-204ENST00000481385 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.76
PHF3-204ENST00000481385 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
PHF3-204ENST00000481385 CDC42BPAQ5VT25 1732 aa19.82■□□□□ 0.76
PHF3-204ENST00000481385 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
PHF3-204ENST00000481385 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
PHF3-204ENST00000481385 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
PHF3-204ENST00000481385 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
PHF3-204ENST00000481385 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.75
PHF3-204ENST00000481385 C11orf95C9JLR9 678 aaPredicted RBP19.76■□□□□ 0.75
PHF3-204ENST00000481385 PTPRGP23470 1445 aa19.75■□□□□ 0.75
PHF3-204ENST00000481385 ANKRD30AQ9BXX3 1397 aa19.74■□□□□ 0.75
PHF3-204ENST00000481385 CHD1O14646 1710 aa19.74■□□□□ 0.75
PHF3-204ENST00000481385 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
PHF3-204ENST00000481385 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
PHF3-204ENST00000481385 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
PHF3-204ENST00000481385 PKD2Q13563 968 aa19.7■□□□□ 0.74
PHF3-204ENST00000481385 HNRNPMP52272 730 aaKnown RBP eCLIP19.7■□□□□ 0.744e-7■■■■□ 20.1
PHF3-204ENST00000481385 SHANK2Q9UPX8 1470 aa19.69■□□□□ 0.74
PHF3-204ENST00000481385 SPATA31E1Q6ZUB1 1445 aa19.68■□□□□ 0.74
PHF3-204ENST00000481385 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
PHF3-204ENST00000481385 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
PHF3-204ENST00000481385 CCDC7Q96M83 1385 aa19.66■□□□□ 0.74
PHF3-204ENST00000481385 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
PHF3-204ENST00000481385 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
PHF3-204ENST00000481385 CDC42BPBQ9Y5S2 1711 aa19.64■□□□□ 0.73
PHF3-204ENST00000481385 NUP155O75694 1391 aa19.64■□□□□ 0.73
PHF3-204ENST00000481385 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
PHF3-204ENST00000481385 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
PHF3-204ENST00000481385 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
PHF3-204ENST00000481385 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
PHF3-204ENST00000481385 ARHGEF5Q12774 1597 aa19.62■□□□□ 0.73
PHF3-204ENST00000481385 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
PHF3-204ENST00000481385 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
PHF3-204ENST00000481385 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
PHF3-204ENST00000481385 TTC37Q6PGP7 1564 aa19.6■□□□□ 0.73
PHF3-204ENST00000481385 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
PHF3-204ENST00000481385 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.72
PHF3-204ENST00000481385 CCDC141Q6ZP82 1450 aa19.58■□□□□ 0.72
PHF3-204ENST00000481385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
PHF3-204ENST00000481385 FKBP8Q14318 412 aa19.56■□□□□ 0.72
PHF3-204ENST00000481385 BCANQ96GW7 911 aa19.56■□□□□ 0.72
PHF3-204ENST00000481385 SYCP2Q9BX26 1530 aa19.56■□□□□ 0.72
PHF3-204ENST00000481385 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
PHF3-204ENST00000481385 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
PHF3-204ENST00000481385 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
PHF3-204ENST00000481385 BCORL1Q5H9F3 1711 aa19.53■□□□□ 0.72
PHF3-204ENST00000481385 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.72
PHF3-204ENST00000481385 ARHGAP5Q13017 1502 aa19.52■□□□□ 0.72
PHF3-204ENST00000481385 USP47Q96K76 1375 aa19.52■□□□□ 0.72
PHF3-204ENST00000481385 KDM5CP41229 1560 aa19.5■□□□□ 0.71
PHF3-204ENST00000481385 FAM135AQ9P2D6 1515 aa19.49■□□□□ 0.71
PHF3-204ENST00000481385 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
PHF3-204ENST00000481385 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
PHF3-204ENST00000481385 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
PHF3-204ENST00000481385 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
PHF3-204ENST00000481385 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
PHF3-204ENST00000481385 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
PHF3-204ENST00000481385 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
PHF3-204ENST00000481385 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
PHF3-204ENST00000481385 DHX29Q7Z478 1369 aaKnown RBP19.44■□□□□ 0.7
PHF3-204ENST00000481385 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
PHF3-204ENST00000481385 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
PHF3-204ENST00000481385 POLR3GLQ9BT43 218 aa19.43■□□□□ 0.7
PHF3-204ENST00000481385 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
PHF3-204ENST00000481385 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
PHF3-204ENST00000481385 CARD11Q9BXL7 1154 aa19.41■□□□□ 0.7
PHF3-204ENST00000481385 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
PHF3-204ENST00000481385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.41■□□□□ 0.79e-7■■□□□ 12.7
PHF3-204ENST00000481385 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
PHF3-204ENST00000481385 UNC13BO14795 1591 aa19.4■□□□□ 0.7
PHF3-204ENST00000481385 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms