RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 CDC42BPAQ5VT25 1732 aa33.4■■■□□ 2.94
TMED4-205ENST00000481238 ZCCHC11Q5TAX3 1644 aaKnown RBP33.38■■■□□ 2.93
TMED4-205ENST00000481238 ROCK1Q13464 1354 aa33.38■■■□□ 2.93
TMED4-205ENST00000481238 ZNF777Q9ULD5 760 aaPredicted RBP33.37■■■□□ 2.93
TMED4-205ENST00000481238 RRP7BPQ9NSQ0 103 aa33.37■■■□□ 2.93
TMED4-205ENST00000481238 MAPKBP1O60336 1514 aa33.31■■■□□ 2.92
TMED4-205ENST00000481238 GCC2Q8IWJ2 1684 aa33.3■■■□□ 2.92
TMED4-205ENST00000481238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.29■■■□□ 2.922e-7■■■■□ 26.2
TMED4-205ENST00000481238 KCNH8Q96L42 1107 aa33.26■■■□□ 2.91
TMED4-205ENST00000481238 PREX2Q70Z35 1606 aa33.24■■■□□ 2.91
TMED4-205ENST00000481238 ACIN1Q9UKV3 1341 aaKnown RBP33.23■■■□□ 2.91
TMED4-205ENST00000481238 TTC37Q6PGP7 1564 aa33.22■■■□□ 2.91
TMED4-205ENST00000481238 CDC42BPBQ9Y5S2 1711 aa33.2■■■□□ 2.91
TMED4-205ENST00000481238 ADGRL2O95490 1459 aa33.18■■■□□ 2.9
TMED4-205ENST00000481238 NCOA1Q15788 1441 aa33.17■■■□□ 2.9
TMED4-205ENST00000481238 RSPH4AQ5TD94 716 aa33.16■■■□□ 2.9
TMED4-205ENST00000481238 CROCC2H7BZ55 1655 aa33.16■■■□□ 2.9
TMED4-205ENST00000481238 MBD5Q9P267 1494 aa33.14■■■□□ 2.9
TMED4-205ENST00000481238 SHANK2Q9UPX8 1470 aa33.14■■■□□ 2.9
TMED4-205ENST00000481238 ARHGEF5Q12774 1597 aa33.14■■■□□ 2.9
TMED4-205ENST00000481238 KDM6BO15054 1643 aa33.13■■■□□ 2.89
TMED4-205ENST00000481238 SAMD9LQ8IVG5 1584 aa33.13■■■□□ 2.89
TMED4-205ENST00000481238 WDR7Q9Y4E6 1490 aa33.13■■■□□ 2.89
TMED4-205ENST00000481238 PLCH2O75038 1416 aa33.13■■■□□ 2.89
TMED4-205ENST00000481238 HNRNPMP52272 730 aaKnown RBP eCLIP33.13■■■□□ 2.89
TMED4-205ENST00000481238 ARHGAP5Q13017 1502 aa33.13■■■□□ 2.89
TMED4-205ENST00000481238 ANKRD30AQ9BXX3 1397 aa33.12■■■□□ 2.89
TMED4-205ENST00000481238 TSPY4P0CV99 314 aa33.11■■■□□ 2.89
TMED4-205ENST00000481238 TSPY10P0CW01 314 aa33.11■■■□□ 2.89
TMED4-205ENST00000481238 MYO5CQ9NQX4 1742 aa33.11■■■□□ 2.89
TMED4-205ENST00000481238 ADGBQ8N7X0 1667 aa33.11■■■□□ 2.89
TMED4-205ENST00000481238 TRIM52Q96A61 297 aa33.08■■■□□ 2.89
TMED4-205ENST00000481238 C9orf84Q5VXU9 1444 aa33.07■■■□□ 2.89
TMED4-205ENST00000481238 NPM1P06748 294 aaKnown RBP eCLIP33.07■■■□□ 2.88
TMED4-205ENST00000481238 PLEKHH2Q8IVE3 1493 aa33.06■■■□□ 2.88
TMED4-205ENST00000481238 KIAA1107Q9UPP5 1409 aa33.06■■■□□ 2.88
TMED4-205ENST00000481238 EFCAB2Q5VUJ9 269 aa33.05■■■□□ 2.88
TMED4-205ENST00000481238 CCDC141Q6ZP82 1450 aa33.04■■■□□ 2.88
TMED4-205ENST00000481238 SIN3AQ96ST3 1273 aa33.04■■■□□ 2.88
TMED4-205ENST00000481238 ASXL2Q76L83 1435 aa33.03■■■□□ 2.88
TMED4-205ENST00000481238 TIMELESSQ9UNS1 1208 aa33.03■■■□□ 2.88
TMED4-205ENST00000481238 ARAP3Q8WWN8 1544 aa32.99■■■□□ 2.87
TMED4-205ENST00000481238 MPHOSPH9Q99550 1183 aa32.99■■■□□ 2.87
TMED4-205ENST00000481238 NEUROD1Q13562 356 aa32.98■■■□□ 2.87
TMED4-205ENST00000481238 SYCP2Q9BX26 1530 aa32.98■■■□□ 2.87
TMED4-205ENST00000481238 ZNF316A6NFI3 1004 aaPredicted RBP32.96■■■□□ 2.87
TMED4-205ENST00000481238 DENND4BO75064 1496 aaPredicted RBP32.94■■■□□ 2.86
TMED4-205ENST00000481238 ANKRD50Q9ULJ7 1429 aa32.94■■■□□ 2.86
TMED4-205ENST00000481238 ABCA9Q8IUA7 1624 aa32.93■■■□□ 2.86
TMED4-205ENST00000481238 MAST1Q9Y2H9 1570 aa32.91■■■□□ 2.86
TMED4-205ENST00000481238 ARHGEF12Q9NZN5 1544 aa32.9■■■□□ 2.86
TMED4-205ENST00000481238 KIF15Q9NS87 1388 aa32.89■■■□□ 2.86
TMED4-205ENST00000481238 ABCC1P33527 1531 aa32.86■■■□□ 2.85
TMED4-205ENST00000481238 SLC4A1APQ9BWU0 796 aaKnown RBP32.83■■■□□ 2.85
TMED4-205ENST00000481238 PZPP20742 1482 aa32.8■■■□□ 2.84
TMED4-205ENST00000481238 CYB5RLQ6IPT4 315 aa32.79■■■□□ 2.84
TMED4-205ENST00000481238 FANCAO15360 1455 aa32.79■■■□□ 2.84
TMED4-205ENST00000481238 RIMBP3CA6NJZ7 1639 aa32.78■■■□□ 2.84
TMED4-205ENST00000481238 RIMBP3BA6NNM3 1639 aa32.78■■■□□ 2.84
TMED4-205ENST00000481238 RIMBP3Q9UFD9 1639 aa32.78■■■□□ 2.84
TMED4-205ENST00000481238 TRAPPC8Q9Y2L5 1435 aa32.78■■■□□ 2.84
TMED4-205ENST00000481238 TONSLQ96HA7 1378 aa32.76■■■□□ 2.84
TMED4-205ENST00000481238 PPP1R15AO75807 674 aaPredicted RBP32.76■■■□□ 2.84
TMED4-205ENST00000481238 ANKRD30BQ9BXX2 1392 aa32.74■■■□□ 2.83
TMED4-205ENST00000481238 PLXNC1O60486 1568 aa32.74■■■□□ 2.83
TMED4-205ENST00000481238 FOXD1Q16676 465 aa32.73■■■□□ 2.83
TMED4-205ENST00000481238 NUP155O75694 1391 aa32.7■■■□□ 2.83
TMED4-205ENST00000481238 KDM5DQ9BY66 1539 aa32.69■■■□□ 2.82
TMED4-205ENST00000481238 RTEL1-TNFRSF6BF6WH68 1400 aa32.69■■■□□ 2.82
TMED4-205ENST00000481238 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
TMED4-205ENST00000481238 AFAP1Q8N556 730 aa32.68■■■□□ 2.82
TMED4-205ENST00000481238 SPAG9O60271 1321 aaKnown RBP32.67■■■□□ 2.82
TMED4-205ENST00000481238 DIEXFQ68CQ4 756 aaKnown RBP32.66■■■□□ 2.82
TMED4-205ENST00000481238 DUOX2Q9NRD8 1548 aa32.66■■■□□ 2.82
TMED4-205ENST00000481238 ADGRL1O94910 1474 aa32.65■■■□□ 2.82
TMED4-205ENST00000481238 SCAPERQ9BY12 1400 aa32.64■■■□□ 2.82
TMED4-205ENST00000481238 PKD2Q13563 968 aa32.63■■■□□ 2.81
TMED4-205ENST00000481238 ERBINQ96RT1 1412 aa32.6■■■□□ 2.81
TMED4-205ENST00000481238 RPRD2Q5VT52 1461 aaKnown RBP32.59■■■□□ 2.81
TMED4-205ENST00000481238 ZFYVE16Q7Z3T8 1539 aa32.56■■■□□ 2.8
TMED4-205ENST00000481238 CFAP74Q9C0B2 1584 aa32.55■■■□□ 2.8
TMED4-205ENST00000481238 UNC13BO14795 1591 aa32.54■■■□□ 2.8
TMED4-205ENST00000481238 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.79
TMED4-205ENST00000481238 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
TMED4-205ENST00000481238 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
TMED4-205ENST00000481238 L3MBTL2Q969R5 705 aa32.48■■■□□ 2.79
TMED4-205ENST00000481238 GLI2P10070 1586 aa32.47■■■□□ 2.79
TMED4-205ENST00000481238 ZNF518AQ6AHZ1 1483 aa32.47■■■□□ 2.79
TMED4-205ENST00000481238 NEO1Q92859 1461 aa32.47■■■□□ 2.79
TMED4-205ENST00000481238 MAGI2Q86UL8 1455 aa32.46■■■□□ 2.79
TMED4-205ENST00000481238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.44■■■□□ 2.784e-8■□□□□ 8.8
TMED4-205ENST00000481238 MYT1LQ9UL68 1186 aa32.42■■■□□ 2.78
TMED4-205ENST00000481238 POGZQ7Z3K3 1410 aa32.41■■■□□ 2.78
TMED4-205ENST00000481238 IQGAP3Q86VI3 1631 aa32.41■■■□□ 2.78
TMED4-205ENST00000481238 MAP3K4Q9Y6R4 1608 aa32.41■■■□□ 2.78
TMED4-205ENST00000481238 TEX14Q8IWB6 1497 aa32.4■■■□□ 2.78
TMED4-205ENST00000481238 DHX29Q7Z478 1369 aaKnown RBP32.39■■■□□ 2.78
TMED4-205ENST00000481238 KDM5CP41229 1560 aa32.36■■■□□ 2.77
TMED4-205ENST00000481238 MLH3Q9UHC1 1453 aa32.34■■■□□ 2.77
TMED4-205ENST00000481238 FAM69CQ0P6D2 419 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms