RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 UACAQ9BZF9 1416 aa26.26■■□□□ 1.79
CCM2-214ENST00000481194 RRBP1Q9P2E9 1410 aaKnown RBP26.26■■□□□ 1.79
CCM2-214ENST00000481194 PLEKHH2Q8IVE3 1493 aa26.24■■□□□ 1.79
CCM2-214ENST00000481194 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
CCM2-214ENST00000481194 SUPT6HQ7KZ85 1726 aaKnown RBP26.24■■□□□ 1.79
CCM2-214ENST00000481194 PCF11O94913 1555 aaKnown RBP26.21■■□□□ 1.79
CCM2-214ENST00000481194 EPRSP07814 1512 aaKnown RBP26.21■■□□□ 1.79
CCM2-214ENST00000481194 GGT6Q6P531 493 aa26.21■■□□□ 1.79
CCM2-214ENST00000481194 KIF3BO15066 747 aa26.19■■□□□ 1.78
CCM2-214ENST00000481194 ARHGAP5Q13017 1502 aa26.18■■□□□ 1.78
CCM2-214ENST00000481194 CTTNBP2Q8WZ74 1663 aa26.17■■□□□ 1.78
CCM2-214ENST00000481194 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.78
CCM2-214ENST00000481194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.77
CCM2-214ENST00000481194 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
CCM2-214ENST00000481194 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
CCM2-214ENST00000481194 DHX57Q6P158 1386 aaKnown RBP26.1■■□□□ 1.77
CCM2-214ENST00000481194 ABCA5Q8WWZ7 1642 aa26.09■■□□□ 1.77
CCM2-214ENST00000481194 PBRM1Q86U86 1689 aa26.08■■□□□ 1.76
CCM2-214ENST00000481194 MLECQ14165 292 aa26.07■■□□□ 1.76
CCM2-214ENST00000481194 TMC1Q8TDI8 760 aa26.06■■□□□ 1.76
CCM2-214ENST00000481194 FAM69CQ0P6D2 419 aa26.05■■□□□ 1.76
CCM2-214ENST00000481194 KIF15Q9NS87 1388 aa26.05■■□□□ 1.76
CCM2-214ENST00000481194 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
CCM2-214ENST00000481194 UGGT2Q9NYU1 1516 aa26.04■■□□□ 1.76
CCM2-214ENST00000481194 CDK13Q14004 1512 aaKnown RBP26.04■■□□□ 1.76
CCM2-214ENST00000481194 KIF14Q15058 1648 aa26.02■■□□□ 1.76
CCM2-214ENST00000481194 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
CCM2-214ENST00000481194 FOXD1Q16676 465 aa26■■□□□ 1.75
CCM2-214ENST00000481194 TMF1P82094 1093 aa25.99■■□□□ 1.75
CCM2-214ENST00000481194 CCDC144AA2RUR9 1427 aa25.99■■□□□ 1.75
CCM2-214ENST00000481194 POGKQ9P215 609 aa25.98■■□□□ 1.75
CCM2-214ENST00000481194 ANKRD50Q9ULJ7 1429 aa25.98■■□□□ 1.75
CCM2-214ENST00000481194 PLB1Q6P1J6 1458 aa25.98■■□□□ 1.75
CCM2-214ENST00000481194 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
CCM2-214ENST00000481194 WDR43Q15061 677 aaKnown RBP eCLIP25.98■■□□□ 1.75
CCM2-214ENST00000481194 MRS2Q9HD23 443 aa25.96■■□□□ 1.75
CCM2-214ENST00000481194 EIF3AQ14152 1382 aaKnown RBP25.95■■□□□ 1.74
CCM2-214ENST00000481194 KNSTRNQ9Y448 316 aa25.95■■□□□ 1.74
CCM2-214ENST00000481194 RAPGEF6Q8TEU7 1601 aa25.94■■□□□ 1.74
CCM2-214ENST00000481194 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
CCM2-214ENST00000481194 ROCK2O75116 1388 aaKnown RBP25.92■■□□□ 1.74
CCM2-214ENST00000481194 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
CCM2-214ENST00000481194 KIAA0556O60303 1618 aa25.91■■□□□ 1.74
CCM2-214ENST00000481194 FAM9BQ8IZU0 186 aa25.9■■□□□ 1.74
CCM2-214ENST00000481194 NUP160Q12769 1436 aa25.89■■□□□ 1.74
CCM2-214ENST00000481194 DAPK1P53355 1430 aa25.89■■□□□ 1.73
CCM2-214ENST00000481194 HNRNPUQ00839 825 aaKnown RBP eCLIP25.89■■□□□ 1.73
CCM2-214ENST00000481194 CANXP27824 592 aaKnown RBP25.88■■□□□ 1.73
CCM2-214ENST00000481194 C14orf37Q86TY3 774 aa25.88■■□□□ 1.73
CCM2-214ENST00000481194 HFM1A2PYH4 1435 aa25.87■■□□□ 1.73
CCM2-214ENST00000481194 ROCK1Q13464 1354 aa25.87■■□□□ 1.73
CCM2-214ENST00000481194 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
CCM2-214ENST00000481194 HSPA5P11021 654 aaKnown RBP25.86■■□□□ 1.73
CCM2-214ENST00000481194 MIER1Q8N108 512 aa25.85■■□□□ 1.73
CCM2-214ENST00000481194 STAC3Q96MF2 364 aa25.85■■□□□ 1.73
CCM2-214ENST00000481194 CFAP53Q96M91 514 aa25.84■■□□□ 1.73
CCM2-214ENST00000481194 PTPN23Q9H3S7 1636 aa25.83■■□□□ 1.72
CCM2-214ENST00000481194 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
CCM2-214ENST00000481194 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
CCM2-214ENST00000481194 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
CCM2-214ENST00000481194 MYT1Q01538 1121 aa25.76■■□□□ 1.71
CCM2-214ENST00000481194 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
CCM2-214ENST00000481194 EID1Q9Y6B2 187 aa25.76■■□□□ 1.71
CCM2-214ENST00000481194 DAXXQ9UER7 740 aaPredicted RBP25.73■■□□□ 1.71
CCM2-214ENST00000481194 SCAPERQ9BY12 1400 aa25.73■■□□□ 1.71
CCM2-214ENST00000481194 AFAP1Q8N556 730 aa25.72■■□□□ 1.71
CCM2-214ENST00000481194 CFAP43Q8NDM7 1665 aa25.71■■□□□ 1.71
CCM2-214ENST00000481194 ZBTB47Q9UFB7 747 aaPredicted RBP25.71■■□□□ 1.71
CCM2-214ENST00000481194 CD109Q6YHK3 1445 aa25.71■■□□□ 1.71
CCM2-214ENST00000481194 GTF3C3Q9Y5Q9 886 aa25.7■■□□□ 1.71
CCM2-214ENST00000481194 NUP153P49790 1475 aaKnown RBP25.7■■□□□ 1.7
CCM2-214ENST00000481194 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
CCM2-214ENST00000481194 ITSN2Q9NZM3 1697 aa25.7■■□□□ 1.7
CCM2-214ENST00000481194 ATP10BO94823 1461 aa25.66■■□□□ 1.7
CCM2-214ENST00000481194 SAMD9Q5K651 1589 aa25.66■■□□□ 1.7
CCM2-214ENST00000481194 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.65■■□□□ 1.7
CCM2-214ENST00000481194 SRPK2P78362 688 aaKnown RBP25.65■■□□□ 1.7
CCM2-214ENST00000481194 CCER2I3L3R5 266 aa25.64■■□□□ 1.7
CCM2-214ENST00000481194 KIAA1107Q9UPP5 1409 aa25.64■■□□□ 1.69
CCM2-214ENST00000481194 AKNAQ7Z591 1439 aa25.63■■□□□ 1.69
CCM2-214ENST00000481194 NUDCQ9Y266 331 aa25.62■■□□□ 1.69
CCM2-214ENST00000481194 ABCC5O15440 1437 aa25.62■■□□□ 1.69
CCM2-214ENST00000481194 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
CCM2-214ENST00000481194 ADGRL1O94910 1474 aa25.62■■□□□ 1.69
CCM2-214ENST00000481194 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
CCM2-214ENST00000481194 NAIPQ13075 1403 aa25.6■■□□□ 1.69
CCM2-214ENST00000481194 HDGFL2Q7Z4V5 671 aaPredicted RBP25.6■■□□□ 1.69
CCM2-214ENST00000481194 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.6■■□□□ 1.69
CCM2-214ENST00000481194 KTN1Q86UP2 1357 aaKnown RBP25.59■■□□□ 1.69
CCM2-214ENST00000481194 STK26Q9P289 416 aa25.58■■□□□ 1.69
CCM2-214ENST00000481194 ABCC2Q92887 1545 aa25.58■■□□□ 1.68
CCM2-214ENST00000481194 GPATCH8Q9UKJ3 1502 aaKnown RBP25.57■■□□□ 1.68
CCM2-214ENST00000481194 PNNQ9H307 717 aaKnown RBP25.56■■□□□ 1.68
CCM2-214ENST00000481194 WDR7Q9Y4E6 1490 aa25.55■■□□□ 1.68
CCM2-214ENST00000481194 RALBP1Q15311 655 aa25.54■■□□□ 1.68
CCM2-214ENST00000481194 FANCAO15360 1455 aa25.54■■□□□ 1.68
CCM2-214ENST00000481194 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
CCM2-214ENST00000481194 PLCH2O75038 1416 aa25.52■■□□□ 1.68
CCM2-214ENST00000481194 POGZQ7Z3K3 1410 aa25.52■■□□□ 1.68
CCM2-214ENST00000481194 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms