RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 KCNA4P22459 653 aa5.94□□□□□ -1.46
GPCPD1-205ENST00000481038 RBM10P98175 930 aaKnown RBP5.93□□□□□ -1.46
GPCPD1-205ENST00000481038 RSPH4AQ5TD94 716 aa5.93□□□□□ -1.46
GPCPD1-205ENST00000481038 VPS8Q8N3P4 1428 aa5.93□□□□□ -1.46
GPCPD1-205ENST00000481038 MAGI1Q96QZ7 1491 aaPredicted RBP5.93□□□□□ -1.46
GPCPD1-205ENST00000481038 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 ZNF777Q9ULD5 760 aaPredicted RBP5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 PLCB2Q00722 1185 aa5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 BBXQ8WY36 941 aaPredicted RBP5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 CUL7Q14999 1698 aa5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 POLA1P09884 1462 aaPredicted RBP5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 KIF21BO75037 1637 aa5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 CCNB3Q8WWL7 1395 aa5.92□□□□□ -1.46
GPCPD1-205ENST00000481038 JPH4Q96JJ6 628 aa5.91□□□□□ -1.46
GPCPD1-205ENST00000481038 EFCAB5A4FU69 1503 aa5.91□□□□□ -1.46
GPCPD1-205ENST00000481038 IGF1RP08069 1367 aa5.91□□□□□ -1.46
GPCPD1-205ENST00000481038 CCDC18Q5T9S5 1454 aa5.91□□□□□ -1.46
GPCPD1-205ENST00000481038 NESP48681 1621 aa5.91□□□□□ -1.46
GPCPD1-205ENST00000481038 CFDP1Q9UEE9 299 aaPredicted RBP5.9□□□□□ -1.46
GPCPD1-205ENST00000481038 CUX1P39880 1505 aa5.9□□□□□ -1.47
GPCPD1-205ENST00000481038 UPF2Q9HAU5 1272 aaKnown RBP5.9□□□□□ -1.47
GPCPD1-205ENST00000481038 PTPRGP23470 1445 aa5.9□□□□□ -1.47
GPCPD1-205ENST00000481038 BIVM-ERCC5R4GMW8 1640 aa5.89□□□□□ -1.47
GPCPD1-205ENST00000481038 PRDM2Q13029 1718 aa5.89□□□□□ -1.47
GPCPD1-205ENST00000481038 ZNF771Q7L3S4 317 aaPredicted RBP5.89□□□□□ -1.47
GPCPD1-205ENST00000481038 RRP9O43818 475 aaKnown RBP5.89□□□□□ -1.47
GPCPD1-205ENST00000481038 RAD54L2Q9Y4B4 1467 aa5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 DHX37Q8IY37 1157 aaKnown RBP5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 EFCAB2Q5VUJ9 269 aa5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 PSMD1Q99460 953 aa5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 WWC1Q8IX03 1113 aa5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 CHAF1AQ13111 956 aaPredicted RBP5.88□□□□□ -1.47
GPCPD1-205ENST00000481038 ARHGAP35Q9NRY4 1499 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 BECN1Q14457 450 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 NAP1L2Q9ULW6 460 aaPredicted RBP5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 SYNJ1O43426 1573 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 GOLGA6L6A8MZA4 724 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 KANK1Q14678 1352 aa5.87□□□□□ -1.47
GPCPD1-205ENST00000481038 KIAA0586Q9BVV6 1533 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 GOLGA6L3A6NEY3 463 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 ARID3CA6NKF2 412 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 CHMP4AQ9BY43 222 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 FGD1P98174 961 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 MIER1Q8N108 512 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 SETQ01105 290 aaPredicted RBP5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 CFAP44Q96MT7 982 aa5.86□□□□□ -1.47
GPCPD1-205ENST00000481038 AQRO60306 1485 aaKnown RBP eCLIP5.86□□□□□ -1.474e-7■■■□□ 15.8
GPCPD1-205ENST00000481038 KCNH8Q96L42 1107 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 IL27Q8NEV9 243 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 IRX3P78415 501 aaPredicted RBP5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 MAP7D2Q96T17 732 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 SNAPC4Q5SXM2 1469 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 PRXQ9BXM0 1461 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 GOLGA6L1Q8N7Z2 621 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 DNAJC5BQ9UF47 199 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
GPCPD1-205ENST00000481038 CLSTN1O94985 981 aa5.84□□□□□ -1.47
GPCPD1-205ENST00000481038 WDR62O43379 1518 aa5.84□□□□□ -1.47
GPCPD1-205ENST00000481038 URB2Q14146 1524 aaKnown RBP5.84□□□□□ -1.47
GPCPD1-205ENST00000481038 HDGFP51858 240 aaKnown RBP5.84□□□□□ -1.47
GPCPD1-205ENST00000481038 OS9Q13438 667 aaPredicted RBP5.84□□□□□ -1.47
GPCPD1-205ENST00000481038 CC2D1BQ5T0F9 858 aaKnown RBP5.84□□□□□ -1.48
GPCPD1-205ENST00000481038 IRX6P78412 446 aaPredicted RBP5.83□□□□□ -1.48
GPCPD1-205ENST00000481038 AEBP1Q8IUX7 1158 aa5.83□□□□□ -1.48
GPCPD1-205ENST00000481038 MAPK8IP2Q13387 824 aaPredicted RBP5.83□□□□□ -1.48
GPCPD1-205ENST00000481038 TONSLQ96HA7 1378 aa5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 MTERF4Q7Z6M4 381 aaKnown RBP5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 PLEKHH2Q8IVE3 1493 aa5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 FYCO1Q9BQS8 1478 aa5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 CASKIN1Q8WXD9 1431 aa5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 GSE1Q14687 1217 aa5.82□□□□□ -1.48
GPCPD1-205ENST00000481038 ANKRD30AQ9BXX3 1397 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 TPM2P07951 284 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 GRIN2AQ12879 1464 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 STK11IPQ8N1F8 1099 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 CCDC66A2RUB6 948 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 FHOD3Q2V2M9 1422 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 IQGAP2Q13576 1575 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 FAM13BQ9NYF5 915 aa5.81□□□□□ -1.48
GPCPD1-205ENST00000481038 PRG4Q92954 1404 aaPredicted RBP5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 FAM43AQ8N2R8 423 aa5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 FANCIQ9NVI1 1328 aa5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 NEFHP12036 1026 aa5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 HECW1Q76N89 1606 aa5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 HNRNPUQ00839 825 aaKnown RBP eCLIP5.8□□□□□ -1.48
GPCPD1-205ENST00000481038 TRHP20396 242 aaPredicted RBP5.79□□□□□ -1.48
GPCPD1-205ENST00000481038 CHMP4BQ9H444 224 aaKnown RBP5.79□□□□□ -1.48
GPCPD1-205ENST00000481038 PPP4R2Q9NY27 417 aa5.79□□□□□ -1.48
GPCPD1-205ENST00000481038 IPO9Q96P70 1041 aaKnown RBP5.79□□□□□ -1.48
GPCPD1-205ENST00000481038 NOM1Q5C9Z4 860 aaKnown RBP5.78□□□□□ -1.48
GPCPD1-205ENST00000481038 PLCD3Q8N3E9 789 aa5.78□□□□□ -1.48
GPCPD1-205ENST00000481038 MEX3CQ5U5Q3 659 aaKnown RBP5.78□□□□□ -1.48
GPCPD1-205ENST00000481038 CLGNO14967 610 aa5.78□□□□□ -1.48
GPCPD1-205ENST00000481038 FAM193AP78312 1265 aa5.78□□□□□ -1.48
GPCPD1-205ENST00000481038 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms