RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 GCC2Q8IWJ2 1684 aa40.94■■■■■ 4.14
TNFRSF25-213ENST00000480393 KDM5BQ9UGL1 1544 aa40.91■■■■■ 4.14
TNFRSF25-213ENST00000480393 ABCC5O15440 1437 aa40.9■■■■■ 4.14
TNFRSF25-213ENST00000480393 ZNF777Q9ULD5 760 aaPredicted RBP40.9■■■■■ 4.14
TNFRSF25-213ENST00000480393 MAPKBP1O60336 1514 aa40.87■■■■■ 4.13
TNFRSF25-213ENST00000480393 RRP7BPQ9NSQ0 103 aa40.87■■■■■ 4.13
TNFRSF25-213ENST00000480393 ROCK1Q13464 1354 aa40.83■■■■■ 4.13
TNFRSF25-213ENST00000480393 PREX2Q70Z35 1606 aa40.81■■■■■ 4.12
TNFRSF25-213ENST00000480393 TTC37Q6PGP7 1564 aa40.77■■■■■ 4.12
TNFRSF25-213ENST00000480393 CROCC2H7BZ55 1655 aa40.76■■■■■ 4.12
TNFRSF25-213ENST00000480393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.76■■■■■ 4.12
TNFRSF25-213ENST00000480393 ADGBQ8N7X0 1667 aa40.72■■■■■ 4.11
TNFRSF25-213ENST00000480393 CDC42BPBQ9Y5S2 1711 aa40.71■■■■■ 4.11
TNFRSF25-213ENST00000480393 KCNH8Q96L42 1107 aa40.67■■■■■ 4.1
TNFRSF25-213ENST00000480393 MYO5CQ9NQX4 1742 aa40.67■■■■■ 4.1
TNFRSF25-213ENST00000480393 ARHGAP5Q13017 1502 aa40.66■■■■■ 4.1
TNFRSF25-213ENST00000480393 KDM6BO15054 1643 aa40.65■■■■■ 4.1
TNFRSF25-213ENST00000480393 ADGRL2O95490 1459 aa40.63■■■■■ 4.1
TNFRSF25-213ENST00000480393 SAMD9LQ8IVG5 1584 aa40.63■■■■■ 4.1
TNFRSF25-213ENST00000480393 SHANK2Q9UPX8 1470 aa40.63■■■■■ 4.09
TNFRSF25-213ENST00000480393 ARHGEF5Q12774 1597 aa40.61■■■■■ 4.09
TNFRSF25-213ENST00000480393 ACIN1Q9UKV3 1341 aaKnown RBP40.59■■■■■ 4.09
TNFRSF25-213ENST00000480393 WDR7Q9Y4E6 1490 aa40.57■■■■■ 4.09
TNFRSF25-213ENST00000480393 ANKRD30AQ9BXX3 1397 aa40.57■■■■■ 4.08
TNFRSF25-213ENST00000480393 NCOA1Q15788 1441 aa40.56■■■■■ 4.08
TNFRSF25-213ENST00000480393 TRIM52Q96A61 297 aa40.55■■■■■ 4.08
TNFRSF25-213ENST00000480393 C9orf84Q5VXU9 1444 aa40.54■■■■■ 4.08
TNFRSF25-213ENST00000480393 CCDC141Q6ZP82 1450 aa40.51■■■■■ 4.08
TNFRSF25-213ENST00000480393 MBD5Q9P267 1494 aa40.51■■■■■ 4.08
TNFRSF25-213ENST00000480393 HNRNPMP52272 730 aaKnown RBP eCLIP40.51■■■■■ 4.08
TNFRSF25-213ENST00000480393 TSPY4P0CV99 314 aa40.5■■■■■ 4.07
TNFRSF25-213ENST00000480393 TSPY10P0CW01 314 aa40.5■■■■■ 4.07
TNFRSF25-213ENST00000480393 PLEKHH2Q8IVE3 1493 aa40.49■■■■■ 4.07
TNFRSF25-213ENST00000480393 PLCH2O75038 1416 aa40.49■■■■■ 4.07
TNFRSF25-213ENST00000480393 SYCP2Q9BX26 1530 aa40.48■■■■■ 4.07
TNFRSF25-213ENST00000480393 RSPH4AQ5TD94 716 aa40.45■■■■■ 4.07
TNFRSF25-213ENST00000480393 SIN3AQ96ST3 1273 aa40.45■■■■■ 4.07
TNFRSF25-213ENST00000480393 NEUROD1Q13562 356 aa40.45■■■■■ 4.07
TNFRSF25-213ENST00000480393 NPM1P06748 294 aaKnown RBP eCLIP40.43■■■■■ 4.06
TNFRSF25-213ENST00000480393 ASXL2Q76L83 1435 aa40.42■■■■■ 4.06
TNFRSF25-213ENST00000480393 KIAA1107Q9UPP5 1409 aa40.41■■■■■ 4.06
TNFRSF25-213ENST00000480393 ZNF316A6NFI3 1004 aaPredicted RBP40.4■■■■■ 4.06
TNFRSF25-213ENST00000480393 EFCAB2Q5VUJ9 269 aa40.39■■■■■ 4.06
TNFRSF25-213ENST00000480393 ARAP3Q8WWN8 1544 aa40.38■■■■■ 4.05
TNFRSF25-213ENST00000480393 TIMELESSQ9UNS1 1208 aa40.36■■■■■ 4.05
TNFRSF25-213ENST00000480393 ANKRD50Q9ULJ7 1429 aa40.34■■■■■ 4.05
TNFRSF25-213ENST00000480393 ABCA9Q8IUA7 1624 aa40.34■■■■■ 4.05
TNFRSF25-213ENST00000480393 MPHOSPH9Q99550 1183 aa40.33■■■■■ 4.05
TNFRSF25-213ENST00000480393 MAST1Q9Y2H9 1570 aa40.32■■■■■ 4.05
TNFRSF25-213ENST00000480393 DENND4BO75064 1496 aaPredicted RBP40.3■■■■■ 4.04
TNFRSF25-213ENST00000480393 KIF15Q9NS87 1388 aa40.3■■■■■ 4.04
TNFRSF25-213ENST00000480393 ABCC1P33527 1531 aa40.3■■■■■ 4.04
TNFRSF25-213ENST00000480393 ARHGEF12Q9NZN5 1544 aa40.24■■■■■ 4.03
TNFRSF25-213ENST00000480393 TONSLQ96HA7 1378 aa40.22■■■■■ 4.03
TNFRSF25-213ENST00000480393 SLC4A1APQ9BWU0 796 aaKnown RBP40.19■■■■■ 4.02
TNFRSF25-213ENST00000480393 PZPP20742 1482 aa40.18■■■■■ 4.02
TNFRSF25-213ENST00000480393 PLXNC1O60486 1568 aa40.18■■■■■ 4.02
TNFRSF25-213ENST00000480393 FANCAO15360 1455 aa40.16■■■■■ 4.02
TNFRSF25-213ENST00000480393 RIMBP3CA6NJZ7 1639 aa40.15■■■■■ 4.02
TNFRSF25-213ENST00000480393 RIMBP3BA6NNM3 1639 aa40.15■■■■■ 4.02
TNFRSF25-213ENST00000480393 RIMBP3Q9UFD9 1639 aa40.15■■■■■ 4.02
TNFRSF25-213ENST00000480393 TRAPPC8Q9Y2L5 1435 aa40.1■■■■■ 4.01
TNFRSF25-213ENST00000480393 DIEXFQ68CQ4 756 aaKnown RBP40.09■■■■■ 4.01
TNFRSF25-213ENST00000480393 FOXD1Q16676 465 aa40.08■■■■■ 4.01
TNFRSF25-213ENST00000480393 KDM5DQ9BY66 1539 aa40.07■■■■■ 4
TNFRSF25-213ENST00000480393 NUP155O75694 1391 aa40.05■■■■■ 4
TNFRSF25-213ENST00000480393 ANKRD30BQ9BXX2 1392 aa40.04■■■■■ 4
TNFRSF25-213ENST00000480393 PPP1R15AO75807 674 aaPredicted RBP40.04■■■■■ 4
TNFRSF25-213ENST00000480393 CYB5RLQ6IPT4 315 aa40.02■■■■■ 4
TNFRSF25-213ENST00000480393 DUOX2Q9NRD8 1548 aa40.02■■■■■ 4
TNFRSF25-213ENST00000480393 ADGRL1O94910 1474 aa40.01■■■■■ 4
TNFRSF25-213ENST00000480393 SPAG9O60271 1321 aaKnown RBP39.99■■■■□ 3.99
TNFRSF25-213ENST00000480393 CD109Q6YHK3 1445 aa39.97■■■■□ 3.99
TNFRSF25-213ENST00000480393 CFAP74Q9C0B2 1584 aa39.97■■■■□ 3.99
TNFRSF25-213ENST00000480393 RTEL1-TNFRSF6BF6WH68 1400 aa39.96■■■■□ 3.99
TNFRSF25-213ENST00000480393 ZFYVE16Q7Z3T8 1539 aa39.95■■■■□ 3.99
TNFRSF25-213ENST00000480393 PKD2Q13563 968 aa39.94■■■■□ 3.98
TNFRSF25-213ENST00000480393 ERBINQ96RT1 1412 aa39.94■■■■□ 3.98
TNFRSF25-213ENST00000480393 SCAPERQ9BY12 1400 aa39.94■■■■□ 3.98
TNFRSF25-213ENST00000480393 UNC13BO14795 1591 aa39.93■■■■□ 3.98
TNFRSF25-213ENST00000480393 RPRD2Q5VT52 1461 aaKnown RBP39.93■■■■□ 3.98
TNFRSF25-213ENST00000480393 AFAP1Q8N556 730 aa39.92■■■■□ 3.98
TNFRSF25-213ENST00000480393 INO80Q9ULG1 1556 aaPredicted RBP39.87■■■■□ 3.97
TNFRSF25-213ENST00000480393 FAM135AQ9P2D6 1515 aa39.86■■■■□ 3.97
TNFRSF25-213ENST00000480393 ATP7AQ04656 1500 aa39.86■■■■□ 3.97
TNFRSF25-213ENST00000480393 ZNF518AQ6AHZ1 1483 aa39.77■■■■□ 3.96
TNFRSF25-213ENST00000480393 IQGAP3Q86VI3 1631 aa39.77■■■■□ 3.96
TNFRSF25-213ENST00000480393 MYT1LQ9UL68 1186 aa39.77■■■■□ 3.96
TNFRSF25-213ENST00000480393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.76■■■■□ 3.96
TNFRSF25-213ENST00000480393 MAGI2Q86UL8 1455 aa39.75■■■■□ 3.95
TNFRSF25-213ENST00000480393 TEX14Q8IWB6 1497 aa39.74■■■■□ 3.95
TNFRSF25-213ENST00000480393 L3MBTL2Q969R5 705 aa39.74■■■■□ 3.95
TNFRSF25-213ENST00000480393 NEO1Q92859 1461 aa39.71■■■■□ 3.95
TNFRSF25-213ENST00000480393 GLI2P10070 1586 aa39.71■■■■□ 3.95
TNFRSF25-213ENST00000480393 MAP3K4Q9Y6R4 1608 aa39.7■■■■□ 3.95
TNFRSF25-213ENST00000480393 POGZQ7Z3K3 1410 aa39.69■■■■□ 3.94
TNFRSF25-213ENST00000480393 KDM5CP41229 1560 aa39.63■■■■□ 3.94
TNFRSF25-213ENST00000480393 KIDINS220Q9ULH0 1771 aa39.62■■■■□ 3.93
TNFRSF25-213ENST00000480393 EIF2AK4Q9P2K8 1649 aaKnown RBP39.6■■■■□ 3.93
TNFRSF25-213ENST00000480393 DHX29Q7Z478 1369 aaKnown RBP39.58■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms