RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 MPHOSPH9Q99550 1183 aa24.28■■□□□ 1.48
PKD1-213ENST00000480227 ABCC5O15440 1437 aa24.28■■□□□ 1.48
PKD1-213ENST00000480227 FOXD1Q16676 465 aa24.28■■□□□ 1.48
PKD1-213ENST00000480227 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
PKD1-213ENST00000480227 NUP160Q12769 1436 aa24.24■■□□□ 1.47
PKD1-213ENST00000480227 TROQ12816 1431 aaPredicted RBP24.24■■□□□ 1.47
PKD1-213ENST00000480227 KIF14Q15058 1648 aa24.22■■□□□ 1.47
PKD1-213ENST00000480227 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
PKD1-213ENST00000480227 CARMIL2Q6F5E8 1435 aa24.21■■□□□ 1.47
PKD1-213ENST00000480227 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
PKD1-213ENST00000480227 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
PKD1-213ENST00000480227 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
PKD1-213ENST00000480227 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
PKD1-213ENST00000480227 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
PKD1-213ENST00000480227 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
PKD1-213ENST00000480227 ANP32CO43423 234 aa24.16■■□□□ 1.46
PKD1-213ENST00000480227 ADCY10Q96PN6 1610 aa24.14■■□□□ 1.45
PKD1-213ENST00000480227 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
PKD1-213ENST00000480227 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
PKD1-213ENST00000480227 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
PKD1-213ENST00000480227 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
PKD1-213ENST00000480227 ABCA8O94911 1581 aa24.08■■□□□ 1.45
PKD1-213ENST00000480227 ADGBQ8N7X0 1667 aa24.07■■□□□ 1.44
PKD1-213ENST00000480227 CCER2I3L3R5 266 aa24.07■■□□□ 1.44
PKD1-213ENST00000480227 NCOA1Q15788 1441 aa24.06■■□□□ 1.44
PKD1-213ENST00000480227 CROCC2H7BZ55 1655 aa24.05■■□□□ 1.44
PKD1-213ENST00000480227 RPRD2Q5VT52 1461 aaKnown RBP24.05■■□□□ 1.44
PKD1-213ENST00000480227 CDC42BPAQ5VT25 1732 aa24.05■■□□□ 1.44
PKD1-213ENST00000480227 ATP10BO94823 1461 aa24.05■■□□□ 1.44
PKD1-213ENST00000480227 PLEKHD1A6NEE1 506 aa24.05■■□□□ 1.44
PKD1-213ENST00000480227 WASHC2AQ641Q2 1341 aa24.04■■□□□ 1.44
PKD1-213ENST00000480227 PZPP20742 1482 aa24.02■■□□□ 1.44
PKD1-213ENST00000480227 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
PKD1-213ENST00000480227 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
PKD1-213ENST00000480227 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
PKD1-213ENST00000480227 ADGRL2O95490 1459 aa23.99■■□□□ 1.43
PKD1-213ENST00000480227 ABCC10Q5T3U5 1492 aa23.99■■□□□ 1.43
PKD1-213ENST00000480227 ANKRD30AQ9BXX3 1397 aa23.95■■□□□ 1.43
PKD1-213ENST00000480227 CHD1O14646 1710 aa23.94■■□□□ 1.42
PKD1-213ENST00000480227 C11orf95C9JLR9 678 aaPredicted RBP23.93■■□□□ 1.42
PKD1-213ENST00000480227 PTPRGP23470 1445 aa23.93■■□□□ 1.42
PKD1-213ENST00000480227 ANKRD50Q9ULJ7 1429 aa23.92■■□□□ 1.42
PKD1-213ENST00000480227 PKD2Q13563 968 aa23.89■■□□□ 1.42
PKD1-213ENST00000480227 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.42
PKD1-213ENST00000480227 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
PKD1-213ENST00000480227 BCANQ96GW7 911 aa23.88■■□□□ 1.41
PKD1-213ENST00000480227 FKBP8Q14318 412 aa23.87■■□□□ 1.41
PKD1-213ENST00000480227 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
PKD1-213ENST00000480227 SHANK2Q9UPX8 1470 aa23.85■■□□□ 1.41
PKD1-213ENST00000480227 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
PKD1-213ENST00000480227 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
PKD1-213ENST00000480227 TSPY4P0CV99 314 aa23.83■■□□□ 1.41
PKD1-213ENST00000480227 TSPY10P0CW01 314 aa23.83■■□□□ 1.41
PKD1-213ENST00000480227 CDC42BPBQ9Y5S2 1711 aa23.82■■□□□ 1.4
PKD1-213ENST00000480227 NUP155O75694 1391 aa23.82■■□□□ 1.4
PKD1-213ENST00000480227 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
PKD1-213ENST00000480227 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
PKD1-213ENST00000480227 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
PKD1-213ENST00000480227 SAMD9LQ8IVG5 1584 aa23.79■■□□□ 1.4
PKD1-213ENST00000480227 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
PKD1-213ENST00000480227 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
PKD1-213ENST00000480227 PREX2Q70Z35 1606 aa23.77■■□□□ 1.4
PKD1-213ENST00000480227 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
PKD1-213ENST00000480227 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
PKD1-213ENST00000480227 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
PKD1-213ENST00000480227 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
PKD1-213ENST00000480227 NEFLP07196 543 aa23.76■■□□□ 1.39
PKD1-213ENST00000480227 HNRNPUQ00839 825 aaKnown RBP eCLIP23.76■■□□□ 1.39
PKD1-213ENST00000480227 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
PKD1-213ENST00000480227 TTC37Q6PGP7 1564 aa23.72■■□□□ 1.39
PKD1-213ENST00000480227 CCDC141Q6ZP82 1450 aa23.72■■□□□ 1.39
PKD1-213ENST00000480227 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
PKD1-213ENST00000480227 KDM5DQ9BY66 1539 aa23.71■■□□□ 1.39
PKD1-213ENST00000480227 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
PKD1-213ENST00000480227 USP47Q96K76 1375 aa23.69■■□□□ 1.38
PKD1-213ENST00000480227 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
PKD1-213ENST00000480227 BCORL1Q5H9F3 1711 aa23.68■■□□□ 1.38
PKD1-213ENST00000480227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.68■■□□□ 1.38
PKD1-213ENST00000480227 ARHGAP5Q13017 1502 aa23.67■■□□□ 1.38
PKD1-213ENST00000480227 ABCC2Q92887 1545 aa23.65■■□□□ 1.38
PKD1-213ENST00000480227 KDM5CP41229 1560 aa23.64■■□□□ 1.38
PKD1-213ENST00000480227 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.37
PKD1-213ENST00000480227 KDM2AQ9Y2K7 1162 aa23.63■■□□□ 1.37
PKD1-213ENST00000480227 FAM135AQ9P2D6 1515 aa23.62■■□□□ 1.37
PKD1-213ENST00000480227 MYO5CQ9NQX4 1742 aa23.61■■□□□ 1.37
PKD1-213ENST00000480227 UHRF1BP1Q6BDS2 1440 aa23.61■■□□□ 1.37
PKD1-213ENST00000480227 RSPH4AQ5TD94 716 aa23.6■■□□□ 1.37
PKD1-213ENST00000480227 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
PKD1-213ENST00000480227 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
PKD1-213ENST00000480227 RALGAPBQ86X10 1494 aa23.59■■□□□ 1.37
PKD1-213ENST00000480227 CNGB1Q14028 1251 aaPredicted RBP23.59■■□□□ 1.37
PKD1-213ENST00000480227 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
PKD1-213ENST00000480227 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
PKD1-213ENST00000480227 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
PKD1-213ENST00000480227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.56■■□□□ 1.36
PKD1-213ENST00000480227 MAST1Q9Y2H9 1570 aa23.55■■□□□ 1.36
PKD1-213ENST00000480227 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
PKD1-213ENST00000480227 ZCCHC11Q5TAX3 1644 aaKnown RBP23.53■■□□□ 1.36
PKD1-213ENST00000480227 IRX6P78412 446 aaPredicted RBP23.51■■□□□ 1.35
PKD1-213ENST00000480227 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms